Hidehiro Ishizawa

Significant change in biomass production was observed when duckweed was co-cultivated with environmental bacterial communities. Promotive, neutral, and inhibitory bacteria in the community would synergistically determine the effects. The results indicate the possibility of improving duckweed biomass production via regulation of co-existing bacterial communities.

Plant growth-promoting bacteria (PGPB) have recently been demonstrated as a promising agent to improve wastewater treatment and biomass production efficiency of duckweed hydrocultures. With a view to their reliable use in aqueous environments, this study analysed the plant colonization dynamics of PGPB and the ecological consequences for the entire duckweed-associated bacterial community. A PGPB strain, Aquitalea magnusonii H3, was inoculated to duckweed at different cell densities or timings in

Understanding the assembly of multispecies microbial communities represents a significant challenge in ecology and has wide applications in agriculture, wastewater treatment, and human healthcare domains. Traditionally, studies on the microbial community assembly focused on analyzing pairwise relationships among species; however, neglecting higher-order interactions, i.e., the change of pairwise relationships in the community context, may lead to substantial deviation from reality. Herein, we ha

Bacterial communities associated with aquatic macrophytes largely influence host primary production and nutrient cycling in freshwater environments; however, little is known about how specific bacteria migrate to and proliferate at this unique habitat. Here, we separately identified bacterial genes involved in the initial colonization and overall fitness on plant surface, using the genome-wide transposon sequencing (Tn-seq) of Aquitalea magnusonii H3, a plant growth-promoting bacterium of the fl

A complete understanding of the plant microbiome has not yet been achieved due to its complexity and temporal shifts in the community structure. To overcome these issues, we created a synthetic bacterial community of the aquatic plant, duckweed. The synthetic community established with six bacterial strains showed a stable composition for 50 days, which may have been because duckweed maintains a similar physiological status through its clonal reproduction. Additionally, the synthetic community r

Abstract The duckweed family (Lemnaceae) is a group of free‐floating aquatic plants with bodies consisting of single floating fronds that multiply clonally. Although they are known to have the fastest relative growth rate (RGR) among higher plants, their functional trait coordination in relation to within‐family variation of RGR is poorly understood. We tested how duckweed species fit within the trait covariation patterns known as the world‐wide leaf economics spectrum (LES). To this end, severa

Abstract Tropical tree species differ widely in their silicon (Si) accumulation patterns, but the implications of such species differences for ecosystem Si flux remain unexplored. We analyzed how biogenic Si flux via leaf litter and soil Si availability in the upper soil vary spatially within a 2 ha area in a lowland Dipterocarp forest in Peninsular Malaysia. Silicon concentration per unit leaf dry mass of 86 dominant tree species in this plot ranged from 0.4 to 126 mg/g. Soil Si availability at

<i>Aquitalea magnusonii</i> strain H3 is a promising plant growth-promoting bacterium for duckweed. Here, we report the draft genome sequence of strain H3 comprising 4,750,601 bp in 73 contigs. Several genes associated with plant root colonization were identified.

Acinetobacter ursingii M3 and Asticcacaulis excentricus M6 are plant growth-inhibiting bacteria that reduce the yield of the duckweed Lemna minor. We report here the complete genome sequences of A. ursingii M3 and A. excentricus M6, sequenced using the PacBio RS II platform.

This study reports an intriguing observation regarding the betaproteobacterium Pelomonas saccharophila MRB3 (NITE P-01647), a candidate plant growth-promoting bacterium that accelerates biomass production of the aquatic plant, duckweed. In a series of experiments in which strain MRB3 cells were inoculated into duckweed cultures, MRB3 improved duckweed growth with decreasing cell density in the culture medium. By monitoring nutrient dynamics of plants and bacteria, we found that MRB3 exhibited sp