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Dongmin Lee

Korea University · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Dongmin Lee's research lab specializes in synaptic adhesion molecules and their roles in neural circuit development, with a focus on the molecular mechanisms underlying synapse formation, specification, and function. The lab investigates how diverse synaptic adhesion proteins—including Shank3, MDGAs, PTPσ, IgSF9b, calsyntenin-3, and LRRTMs—regulate the development and maintenance of excitatory and inhibitory synapses in the mammalian brain. Using a combination of genetic, biochemical, and imaging approaches, the lab explores how these molecules contribute to neural connectivity and are implicated in neurodevelopmental disorders such as autism spectrum disorders. Their work reveals critical insights into the specificity and diversity of synaptic connections during postnatal brain development.

synaptic adhesion moleculessynapse developmentneural circuit formationneurodevelopmental disorderspostsynaptic organization

Research Overview

Papers
58
Total Citations
1,663
Papers (5y)
19
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
19total
2022
2023
2024
2025
2026
Citations per year (5y)
133total
20222023202420252026

Selected Papers

15
1
Article|165 citations·2017
Temporally precise labeling and control of neuromodulatory circuits in the mammalian brain
Dongmin Lee, Meaghan C. Creed, Kanghoon Jung, Thomas Stefanelli, Daniel J. Wendler, Won Chan Oh, Neymi Mignocchi, Christian Lüscher, Hyung-Bae Kwon
SJR Q1Nature Methods
Cellular and Molecular NeuroscienceNeuroscience
2
Article|163 citations·2017
A calcium- and light-gated switch to induce gene expression in activated neurons
Dongmin Lee, Jung Ho Hyun, Kanghoon Jung, Patrick Hannan, Hyung-Bae Kwon
SJR Q1Nature Biotechnology
Cellular and Molecular NeuroscienceNeuroscience
3
Article|153 citations·2015
Shank3-mutant mice lacking exon 9 show altered excitation/inhibition balance, enhanced rearing, and spatial memory deficit
Jiseok Lee, Changuk Chung, Seungmin Ha, Dongmin Lee, Do Young ‍Kim, Hyun Kim, Eunjoon Kim
SJR Q1Frontiers in Cellular NeuroscienceOA

Shank3 is a postsynaptic scaffolding protein implicated in synapse development and autism spectrum disorders. The Shank3 gene is known to produce diverse splice variants whose functions have not been fully explored. In the present study, we generated mice lacking Shank3 exon 9 (Shank3 (Δ9) mice), and thus missing five out of 10 known Shank3 splice variants containing the N-terminal ankyrin repeat region, including the longest splice variant, Shank3a. Our X-gal staining results revealed that Shan

GeneticsBiochemistry, Genetics and Molecular Biology
4
Article|142 citations·2012
MDGAs interact selectively with neuroligin-2 but not other neuroligins to regulate inhibitory synapse development
Kangduk Lee, Yoonji Kim, Sung‐Jin Lee, Qiang Yuan, Dongmin Lee, Hyun Woo Lee, Hyun Kim, H. Shawn Je, Thomas C. Südhof, Jaewon Ko
SJR Q1Proceedings of the National Academy of SciencesOA

The MAM domain-containing GPI anchor proteins MDGA1 and MDGA2 are Ig superfamily adhesion molecules composed of six IG domains, a fibronectin III domain, a MAM domain, and a GPI anchor. MDGAs contribute to the radial migration and positioning of a subset of cortical neurons during early neural development. However, MDGAs continue to be expressed in postnatal brain, and their functions during postnatal neural development remain unknown. Here, we demonstrate that MDGAs specifically and with a nano

Molecular BiologyBiochemistry, Genetics and Molecular Biology
5
Article|105 citations·2015
PTPσ functions as a presynaptic receptor for the glypican-4/LRRTM4 complex and is essential for excitatory synaptic transmission
Ji Seung Ko, Gopal Pramanik, Ji Won Um, Ji Seon Shim, Dongmin Lee, Kee Hun Kim, Gug-Young Chung, Giuseppe Condomitti, Ho Min Kim, Hyun Kim, Joris de Wit, Kang-Sik Park
SJR Q1Proceedings of the National Academy of SciencesOA

Leukocyte common antigen-related receptor protein tyrosine phosphatases--comprising LAR, PTPδ, and PTPσ--are synaptic adhesion molecules that organize synapse development. Here, we identify glypican 4 (GPC-4) as a ligand for PTPσ. GPC-4 showed strong (nanomolar) affinity and heparan sulfate (HS)-dependent interaction with the Ig domains of PTPσ. PTPσ bound only to proteolytically cleaved GPC-4 and formed additional complex with leucine-rich repeat transmembrane protein 4 (LRRTM4) in rat brains.

Molecular BiologyBiochemistry, Genetics and Molecular Biology
6
Article|104 citations·2019
Trifunctional layered electrodeposited nickel iron hydroxide electrocatalyst with enhanced performance towards the oxidation of water, urea and hydrazine
Pravin Babar, A.C. Lokhande, Vijay Karade, In Jae Lee, Dongmin Lee, S.M. Pawar, Jin Hyeok Kim
SJR Q1Journal of Colloid and Interface Science
Renewable Energy, Sustainability and the EnvironmentEnergy
7
Article|97 citations·2013
The adhesion protein IgSF9b is coupled to neuroligin 2 via S-SCAM to promote inhibitory synapse development
Jooyeon Woo, Seok‐Kyu Kwon, Jungyong Nam, Seungwon Choi, Hideto Takahashi, Dilja Krueger‐Burg, Joohyun Park, Yeunkum Lee, Jin Young Bae, Dongmin Lee, Jaewon Ko, Hyun Kim
SJR Q1The Journal of Cell BiologyOA

Synaptic adhesion molecules regulate diverse aspects of synapse formation and maintenance. Many known synaptic adhesion molecules localize at excitatory synapses, whereas relatively little is known about inhibitory synaptic adhesion molecules. Here we report that IgSF9b is a novel, brain-specific, homophilic adhesion molecule that is strongly expressed in GABAergic interneurons. IgSF9b was preferentially localized at inhibitory synapses in cultured rat hippocampal and cortical interneurons and w

Cellular and Molecular NeuroscienceNeuroscience
8
Article|90 citations·2014
Calsyntenins Function as Synaptogenic Adhesion Molecules in Concert with Neurexins
Ji Won Um, Gopal Pramanik, Ji Seung Ko, Min‐Young Song, Dongmin Lee, Hyun Kim, Kang‐Sik Park, Thomas C. Südhof, Katsuhiko Tabuchi, Jaewon Ko
SJR Q1Cell ReportsOA

Multiple synaptic adhesion molecules govern synapse formation. Here, we propose calsyntenin-3/alcadein-β as a synapse organizer that specifically induces presynaptic differentiation in heterologous synapse-formation assays. Calsyntenin-3 (CST-3) is highly expressed during various postnatal periods of mouse brain development. The simultaneous knockdown of all three CSTs, but not CST-3 alone, decreases inhibitory, but not excitatory, synapse densities in cultured hippocampal neurons. Moreover, the

Cellular and Molecular NeuroscienceNeuroscience
9
Article|75 citations·2016
LRRTM3 Regulates Excitatory Synapse Development through Alternative Splicing and Neurexin Binding
Ji Won Um, Tae-Yong Choi, Hyeyeon Kang, Yi Sul Cho, Gayoung Choii, Pavel Uvarov, Dongseok Park, Daun Jeong, Sang‐Min Jeon, Dongmin Lee, Hyun Kim, Seung‐Hee Lee
SJR Q1Cell ReportsOA

The four members of the LRRTM family (LRRTM1-4) are postsynaptic adhesion molecules essential for excitatory synapse development. They have also been implicated in neuropsychiatric diseases. Here, we focus on LRRTM3, showing that two distinct LRRTM3 variants generated by alternative splicing regulate LRRTM3 interaction with PSD-95, but not its excitatory synapse-promoting activity. Overexpression of either LRRTM3 variant increased excitatory synapse density in dentate gyrus (DG) granule neurons,

Cellular and Molecular NeuroscienceNeuroscience
10
Article|58 citations·2015
Synaptic adhesion molecule IgSF11 regulates synaptic transmission and plasticity
Seil Jang, Daeyoung Oh, Yeunkum Lee, Eric Hosy, Hye‐Won Shin, Christoph van Riesen, Daniel J. Whitcomb, Julia M. Warburton, Jihoon Jo, Doyoun Kim, Sun Gyun Kim, Seung Min Um
SJR Q1Nature NeuroscienceOA
Cellular and Molecular NeuroscienceNeuroscience
11
Article|41 citations·2022
Tagging active neurons by soma-targeted Cal-Light
Jung Ho Hyun, Kenichiro Nagahama, Ho Namkung, Neymi Mignocchi, Seung‐Eon Roh, Patrick Hannan, Sarah Krüssel, Chuljung Kwak, Abigail McElroy, Bian Liu, Mingguang Cui, Seung-Hwan Lee
SJR Q1Nature CommunicationsOA

Verifying causal effects of neural circuits is essential for proving a direct circuit-behavior relationship. However, techniques for tagging only active neurons with high spatiotemporal precision remain at the beginning stages. Here we develop the soma-targeted Cal-Light (ST-Cal-Light) which selectively converts somatic calcium rise triggered by action potentials into gene expression. Such modification simultaneously increases the signal-to-noise ratio of reporter gene expression and reduces the

Cellular and Molecular NeuroscienceNeuroscience
12
Article|22 citations·2013
Effects of annealing and plasma treatment on the electrical and optical properties of spin-coated ITZO films
Dongmin Lee, Jae‐Kwan Kim, Jinchen Hao, Han‐Ki Kim, Jaesik Yoon, Ji‐Myon Lee
SJR Q1Journal of Alloys and Compounds
Materials ChemistryMaterials Science
13
Article|14 citations·2023
A single-component, light-assisted uncaging switch for endoproteolytic release
Mingguang Cui, Seung-Hwan Lee, Sung Hwan Ban, Jae Ryun Ryu, Meiying Shen, Soo Hyun Yang, Jin Young Kim, Seul Ki Choi, Jaemin Han, Yoonhee Kim, Kihoon Han, Donghun Lee
SJR Q1Nature Chemical Biology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Review|10 citations·2021
Current and future techniques for detecting oxytocin: Focusing on genetically-encoded GPCR sensors
Dongmin Lee, Hyung‐Bae Kwon
SJR Q3Journal of Neuroscience Methods
Social PsychologyPsychology
15
Article|9 citations·2012
Inositol 1,4,5-Trisphosphate 3-Kinase A Is a Novel Microtubule-associated Protein
Dongmin Lee, Hyun Woo Lee, Soontaek Hong, Byung-il Choi, Hyun‐Wook Kim, Seung Baek Han, Il Hwan Kim, Jin Young Bae, Yong Chul Bae, Im Joo Rhyu, Woong Sun, Hyun Kim
SJR Q1Journal of Biological ChemistryOA

Inositol 1,4,5-trisphosphate 3-kinase A (IP(3)K-A) is a brain specific and F-actin-binding protein. We recently demonstrated that IP(3)K-A modulates a structural reorganization of dendritic spines through F-actin remodeling, which is required for synaptic plasticity and memory formation in brain. However, detailed functions of IP(3)K-A and its regulatory mechanisms involved in the neuronal cytoskeletal dynamics still remain unknown. In the present study, we identified tubulin as a candidate of I

Cell BiologyBiochemistry, Genetics and Molecular Biology

Research Areas

Cellular and Molecular NeuroscienceGeneticsMolecular BiologyMaterials ChemistryCell BiologySocial Psychology

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