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Hee Jae Huh

Sungkyunkwan University · Medicine

About the Lab

Professor Hee Jae Huh's research lab specializes in clinical microbiology and molecular diagnostics, with a focus on the rapid and accurate detection of bacterial pathogens and antimicrobial resistance. The lab develops and evaluates molecular assays for respiratory pathogens, mycobacteria—including Mycobacterium avium complex and Mycobacterium abscessus—and antimicrobial resistance markers, aiming to improve diagnostic speed and clinical decision-making. Key research directions include the application of real-time PCR, line probe assays, and novel molecular platforms such as dRAST and MuDT technology for infectious disease diagnostics.

molecular diagnosticsantimicrobial resistancemycobacterial infectionsrespiratory pathogens16S rRNA sequencing

Research Overview

Papers
284
Total Citations
5,903
Papers (5y)
82
Primary Field
Medicine

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
82total
2022
2023
2024
2025
2026
Citations per year (5y)
628total
20222023202420252026

Selected Papers

15
1
Article|83 citations·2020
Evaluation of the BioFire FilmArray Pneumonia Panel for rapid detection of respiratory bacterial pathogens and antibiotic resistance genes in sputum and endotracheal aspirate specimens
In Young Yoo, Kyungmin Huh, Hyang Jin Shim, Sun Ae Yun, Yoo Na Chung, On Kyun Kang, Hee Jae Huh, Nam Yong Lee
SJR Q1International Journal of Infectious DiseasesOA

FA-Pneumo is a rapid test with high sensitivity for the detection of bacteria and antimicrobial resistance genes in sputum and ETA specimens and could aid in determining antibiotic therapy.

Molecular MedicineBiochemistry, Genetics and Molecular Biology
2
Review|71 citations·2018
Recent advances in molecular diagnostics and understanding mechanisms of drug resistance in nontuberculous mycobacterial diseases
Hee Jae Huh, Su‐Young Kim, Byung Woo Jhun, Sung Jae Shin, Won‐Jung Koh
SJR Q1Infection Genetics and EvolutionOA
EpidemiologyMedicine
3
Article|67 citations·2019
GenoType NTM-DR Performance Evaluation for Identification of Mycobacterium avium Complex and Mycobacterium abscessus and Determination of Clarithromycin and Amikacin Resistance
Hee Jae Huh, Su‐Young Kim, Hyang Jin Shim, Dae Hun Kim, In Young Yoo, On‐Kyun Kang, Chang‐Seok Ki, So–Youn Shin, Byung Woo Jhun, Sung Jae Shin, Charles L. Daley, Won‐Jung Koh
SJR Q1Journal of Clinical MicrobiologyOA

We evaluated the GenoType NTM-DR (NTM-DR) line probe assay for identifying Mycobacterium avium complex (MAC) species and Mycobacterium abscessus subspecies and for determining clarithromycin and amikacin resistance. Thirty-eight reference strains and 145 clinical isolates (58 MAC and 87 M. abscessus isolates), including 54 clarithromycin- and/or amikacin-resistant strains, were involved.

EpidemiologyMedicine
4
Article|32 citations·2016
Performance Evaluation of Allplex Respiratory Panels 1, 2, and 3 for Detection of Respiratory Viruses and Influenza A Virus Subtypes
Hee Jae Huh, Ji‐Youn Kim, Hyeon Jeong Kwon, Sun Ae Yun, Myoung-Keun Lee, Nam Yong Lee, Jong‐Won Kim, Chang‐Seok Ki
SJR Q1Journal of Clinical MicrobiologyOA

The Allplex respiratory panels 1, 2, and 3 (Allplex) comprise a one-step real-time reverse transcription-PCR assay for the detection of respiratory viruses (RVs) and influenza A subtypes based on multiple detection temperature (MuDT) technology. The performance of the Allplex assay was compared with those of the AdvanSure RV real-time PCR kit (AdvanSure) and the PowerChek pandemic H1N1/H3N2/H5N1 real-time PCR kit (PowerChek) using 417 clinical respiratory specimens. In comparison with the AdvanS

EpidemiologyMedicine
5
Article|25 citations·2014
Evaluation of the Cobas TaqMan MTB Test for the Detection of Mycobacterium tuberculosis Complex According to Acid-Fast-Bacillus Smear Grades in Respiratory Specimens
Hee Jae Huh, Won‐Jung Koh, Dong Joon Song, Chang‐Seok Ki, Nam Yong Lee
SJR Q1Journal of Clinical MicrobiologyOA

We evaluated the performance of the Cobas TaqMan MTB test (Roche Diagnostics, Basel, Switzerland), stratified by acid-fast bacilli (AFB) smear grades. The sensitivity of this test in smear-positive specimens was >95% in all grades, while that in trace and negative specimens was 85.3% and 34.4%, respectively.

Infectious DiseasesMedicine
6
Article|23 citations·2023
The lung microbiota in nontuberculous mycobacterial pulmonary disease
Bo‐Guen Kim, Noeul Kang, Su‐Young Kim, Dae Hun Kim, Hojoong Kim, O Jung Kwon, Hee Jae Huh, Nam Yong Lee, Byung Woo Jhun
SJR Q1PLoS ONEOA

BACKGROUND: The role of bacterial microbiota in the pathogenesis of nontuberculous mycobacterial pulmonary disease (NTM-PD) is unclear. We aimed to compare the bacterial microbiome of disease-invaded lesions and non-invaded lung tissue from NTM-PD patients. METHODS: We analyzed lung tissues from 23 NTM-PD patients who underwent surgical lung resection. Lung tissues were collected in pairs from each patient, with one sample from a disease-involved site and the other from a non-involved site. Lung

EpidemiologyMedicine
7
Article|21 citations·2018
Performance evaluation of the QMAC-dRAST for staphylococci and enterococci isolated from blood culture: a comparative study of performance with the VITEK-2 system
Hee Jae Huh, Dong Joon Song, Hyang Jin Shim, Won Kyung Kwon, Min‐Seung Park, Mi Ra Ryu, Eun Hye Cho, Jongwon Oh, In Young Yoo, Nam Yong Lee
SJR Q1Journal of Antimicrobial ChemotherapyOA

The QMAC-dRAST system provided rapid results and represents an alternative to conventional AST methods. The QMAC-dRAST with colony isolates produced more reliable results for staphylococci and enterococci than the QMAC-dRAST with PBCB. The QMAC-dRAST system also performed comparably to BMD and the VITEK-2 system.

Clinical BiochemistryBiochemistry, Genetics and Molecular Biology
8
Article|21 citations·2014
Performance evaluation of the Xpert MTB/RIF assay according to its clinical application
Hee Jae Huh, Byeong‐Ho Jeong, Kyeongman Jeon, Won‐Jung Koh, Chang‐Seok Ki, Nam Yong Lee
SJR Q1BMC Infectious DiseasesOA

BACKGROUND: The Xpert MTB/RIF assay (Xpert assay; Cepheid, Sunnyvale, CA) is becoming the test of choice for the rapid diagnosis of tuberculosis and rifampin (RIF) resistance. The aim of this study was to evaluate the performance of the Xpert assay with respect to its clinical application at a tertiary care hospital in Korea, a country with an intermediate tuberculosis burden and high-resource. METHODS: A total of 303 Xpert assay results from 109 smear-positive and 194 smear-negative respiratory

Infectious DiseasesMedicine
9
Article|21 citations·2016
Evaluation of three real-time PCR assays for differential identification of Mycobacterium tuberculosis complex and nontuberculous mycobacteria species in liquid culture media
Yu Jung Jung, Ji‐Youn Kim, Dong Joon Song, Won‐Jung Koh, Hee Jae Huh, Chang‐Seok Ki, Nam Yong Lee
SJR Q2Diagnostic Microbiology and Infectious Disease
EpidemiologyMedicine
10
Article|21 citations·2013
Gene mutation profiles and prognostic implications in Korean patients with T-lymphoblastic leukemia
Hee Jae Huh, Soo Hyun Lee, Keon Hee Yoo, Ki Woong Sung, Hong Hoe Koo, Jun Ho Jang, Kihyun Kım, Seok Jin Kim, Won Seog Kim, Chul Won Jung, Ki-O Lee, Sun‐Hee Kim
SJR Q2Annals of Hematology
Public Health, Environmental and Occupational HealthMedicine
11
Article|20 citations·2020
Surveillance of Coronavirus Disease 2019 (COVID-19) Testing in Clinical Laboratories in Korea
Hee Jae Huh, Ki Ho Hong, Taek Soo Kim, Sang Hoon Song, Kyoung Ho Roh, Hyukmin Lee, Gye Cheol Kwon
SJR Q2Annals of Laboratory MedicineOA

In response to the ongoing coronavirus disease 2019 (COVID-19) pandemic, an online laboratory surveillance system was established to monitor severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) real-time reverse transcription-PCR (rRT-PCR) testing capacities and results. SARS-CoV-2 rRT-PCR testing data were collected from 97 clinical laboratories, including 84 medical institutions and 13 independent clinical laboratories in Korea. We assessed the testing capacities to utilize SARS-CoV-2

Infectious DiseasesMedicine
12
Article|19 citations·2021
Comparison of the PowerChek SARS-CoV-2, Influenza A&B, RSV Multiplex Real-time PCR Kit and BioFire Respiratory Panel 2.1 for simultaneous detection of SARS-CoV-2, influenza A and B, and respiratory syncytial virus
Tae Yeul Kim, Ji‐Youn Kim, Hyang Jin Shim, Sun Ae Yun, Ja‐Hyun Jang, Hee Jae Huh, Jong‐Won Kim, Nam Yong Lee
SJR Q3Journal of Virological MethodsOA
EpidemiologyMedicine
13
Article|17 citations·2011
Streptococcus suis Meningitis with Bilateral Sensorineural Hearing Loss
Hee Jae Huh, Kyoung‐Jin Park, Ja‐Hyun Jang, Mina Lee, Jang Ho Lee, Yoon Hee Ahn, Cheol‐In Kang, Chang‐Seok Ki, Nam Yong Lee
SJR Q2Annals of Laboratory MedicineOA

Streptococcus suis infection is an emerging zoonosis in Asia. The most common disease manifestation is meningitis, which is often associated with hearing loss and cochleovestibular signs. S. suis infection in humans mainly occurs among risk groups that have frequent exposure to pigs or raw pork. Here, we report a case of S. suis meningitis in a 67-yr-old pig carcass handler, who presented with dizziness and sensorineural hearing loss followed by headaches. Gram-positive diplococci were isolated

Public Health, Environmental and Occupational HealthMedicine
14
Article|17 citations·2018
Comparative Evaluation Between the RealStarPneumocystis jiroveciiPCR Kit and the AmpliSensPneumocystis jirovecii(carinii)-FRT PCR Kit for DetectingP. jiroveciiin Non-HIV Immunocompromised Patients
Hee Jae Huh, Kyoung Ree Lim, Chang‐Seok Ki, Kyungmin Huh, Hyang Jin Shim, Dong Joon Song, Yae‐Jean Kim, Doo Ryeon Chung, Nam Yong Lee
SJR Q2Annals of Laboratory MedicineOA

BACKGROUND: )-FRT PCR kit (InterLabService Ltd., Moscow, Russia). METHODS: pneumonia [PCP], possible PCP, or unlikely PCP) based on clinical and radiological observations. RESULTS: <0.05). When stratified by sample type, the positive rate for BAL fluids from the clinical PCP group was 100% using either assay, whereas the positive rate for sputum/ETA samples was only 20%. CONCLUSIONS: DNA in a clinical laboratory setting, though their results should be interpreted considering sample type.

EpidemiologyMedicine
15
Article|14 citations·2015
Comparison of the AdvanSure™ real-time RT-PCR and Seeplex® RV12 ACE assay for the detection of respiratory viruses
Yu Jung Jung, Hyeon Jeong Kwon, Hee Jae Huh, Chang‐Seok Ki, Nam Yong Lee, Jong‐Won Kim
SJR Q3Journal of Virological Methods
EpidemiologyMedicine

Research Areas

EpidemiologyInfectious DiseasesMolecular MedicineClinical BiochemistryPublic Health, Environmental and Occupational HealthPulmonary and Respiratory Medicine

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