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Jaechul Lim

Seoul National University · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Jaechul Lim's research lab focuses on post-transcriptional gene regulation, particularly the role of RNA modifications and mRNA tail dynamics in cellular homeostasis and disease. The lab investigates how polyadenylation, deadenylation, and guanylation of mRNA tails control mRNA stability, translation, and immune cell function. Key research directions include the molecular mechanisms of T cell quiescence, the regulation of maternal mRNA in early development, and the transfer of immune cell membrane proteins to cancer cells via trogocytosis, contributing to immunosuppression in tumors. The lab also explores the lipid-binding properties of adiponectin and related C1q/TNF-related proteins, linking metabolism and immunity.

mRNA regulationpoly(A) tailT cell quiescencetrogocytosisRNA modifications

Research Overview

Papers
50
Total Citations
3,000
Papers (5y)
22
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
22total
2022
2023
2024
2025
2026
Citations per year (5y)
204total
20222023202420252026

Selected Papers

15
1
Article|480 citations·2014
TAIL-seq: Genome-wide Determination of Poly(A) Tail Length and 3′ End Modifications
Hyeshik Chang, Jaechul Lim, Minju Ha, V. Narry Kim
SJR Q1Molecular CellOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|309 citations·2012
Mono-Uridylation of Pre-MicroRNA as a Key Step in the Biogenesis of Group II let-7 MicroRNAs
Inha Heo, Minju Ha, Jaechul Lim, Mi-Jeong Yoon, Jong‐Eun Park, S. Chul Kwon, Hyeshik Chang, V. Narry Kim
SJR Q1CellOA
Cancer ResearchBiochemistry, Genetics and Molecular Biology
3
Article|306 citations·2014
Uridylation by TUT4 and TUT7 Marks mRNA for Degradation
Jaechul Lim, Minju Ha, Hyeshik Chang, S. Chul Kwon, Dhirendra K. Simanshu, Dinshaw J. Patel, V Narry Kim
SJR Q1CellOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Article|237 citations·2018
PABP Cooperates with the CCR4-NOT Complex to Promote mRNA Deadenylation and Block Precocious Decay
Hyerim Yi, Joha Park, Minju Ha, Jaechul Lim, Hyeshik Chang, V. Narry Kim
SJR Q1Molecular CellOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
5
Article|213 citations·2020
mRNA destabilization by BTG1 and BTG2 maintains T cell quiescence
Soo Seok Hwang, Jaechul Lim, Zhibin Yu, Philip Kong, Esen Sefik, Hao Xu, Christian C. D. Harman, Lark Kyun Kim, Gap Ryol Lee, Huabing Li, Richard A. Flavell
SJR Q1ScienceOA

T cells maintain a quiescent state prior to activation. As inappropriate T cell activation can cause disease, T cell quiescence must be preserved. Despite its importance, the mechanisms underlying the "quiescent state" remain elusive. Here, we identify BTG1 and BTG2 (BTG1/2) as factors responsible for T cell quiescence. BTG1/2-deficient T cells show an increased proliferation and spontaneous activation due to a global increase in messenger RNA (mRNA) abundance, which reduces the threshold to act

Molecular BiologyBiochemistry, Genetics and Molecular Biology
6
Article|191 citations·2016
mTAIL-seq reveals dynamic poly(A) tail regulation in oocyte-to-embryo development
Jaechul Lim, Mihye Lee, Ahyeon Son, Hyeshik Chang, V. Narry Kim
SJR Q1Genes & DevelopmentOA

Eukaryotic mRNAs are subject to multiple types of tailing that critically influence mRNA stability and translatability. To investigate RNA tails at the genomic scale, we previously developed TAIL-seq, but its low sensitivity precluded its application to biological materials of minute quantity. In this study, we report a new version of TAIL-seq (mRNA TAIL-seq [mTAIL-seq]) with enhanced sequencing depth for mRNAs (by ∼1000-fold compared with the previous version). The improved method allows us to

Molecular BiologyBiochemistry, Genetics and Molecular Biology
7
Article|185 citations·2018
Mixed tailing by TENT4A and TENT4B shields mRNA from rapid deadenylation
Jaechul Lim, Dong-Wan Kim, Young-Suk Lee, Minju Ha, Mihye Lee, Jinah Yeo, Hyeshik Chang, Jaewon Song, Kwangseog Ahn, V. Narry Kim
SJR Q1Science

RNA tails play integral roles in the regulation of messenger RNA (mRNA) translation and decay. Guanylation of the poly(A) tail was discovered recently, yet the enzymology and function remain obscure. Here we identify TENT4A (PAPD7) and TENT4B (PAPD5) as the enzymes responsible for mRNA guanylation. Purified TENT4 proteins generate a mixed poly(A) tail with intermittent non-adenosine residues, the most common of which is guanosine. A single guanosine residue is sufficient to impede the deadenylas

Molecular BiologyBiochemistry, Genetics and Molecular Biology
8
Article|155 citations·2021
γδ T cells regulate the intestinal response to nutrient sensing
Zuri A. Sullivan, William Khoury-Hanold, Jaechul Lim, Christopher S. Smillie, Moshe Biton, Bernardo Sgarbi Reis, Rachel K. Zwick, Scott D. Pope, Kavita Israni-Winger, Roham Parsa, Naomi H. Philip, Saleh Rashed
SJR Q1ScienceOA

The intestine is a site of direct encounter with the external environment and must consequently balance barrier defense with nutrient uptake. To investigate how nutrient uptake is regulated in the small intestine, we tested the effect of diets with different macronutrient compositions on epithelial gene expression. We found that enzymes and transporters required for carbohydrate digestion and absorption were regulated by carbohydrate availability. The "on-demand" induction of this machinery requ

ImmunologyImmunology and Microbiology
9
Article|140 citations·2018
Terminal Uridylyltransferases Execute Programmed Clearance of Maternal Transcriptome in Vertebrate Embryos
Hyeshik Chang, Jinah Yeo, Jeong-gyun Kim, Hyunjoon Kim, Jaechul Lim, Mihye Lee, Hyun Ho Kim, Jiyeon Ohk, Hee‐Yeon Jeon, Hyun‐Sook Lee, Hosung Jung, Kyu‐Won Kim
SJR Q1Molecular CellOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
Article|128 citations·2013
Lipidomic analysis of human placental Syncytiotrophoblast microvesicles in adverse pregnancy outcomes
Sonia Baig, Jaechul Lim, Aaron Z. Fernandis, Markus R. Wenk, Anita Sugam Kale, Lin Su, Arijit Biswas, S Vasoo, Guanghou Shui, Mahesh Choolani
SJR Q1Placenta
Obstetrics and GynecologyMedicine
11
Article|96 citations·2014
Adenylation of Maternally Inherited MicroRNAs by Wispy
Mihye Lee, Yeon Choi, Kijun Kim, Hua Jin, Jaechul Lim, Tuan Anh Nguyen, Ji-Hye Yang, Minsun Jeong, Antonio J. Giráldez, Hui Yang, Dinshaw J. Patel, V. Narry Kim
SJR Q1Molecular CellOA
Cancer ResearchBiochemistry, Genetics and Molecular Biology
12
Article|74 citations·2020
Long-Term Programming of CD8 T Cell Immunity by Perinatal Exposure to Glucocorticoids
Jun Young Hong, Jaechul Lim, Fernando O. de Carvalho, Jen Young Cho, Bharat Vaidyanathan, Shuang Yu, Charles Annicelli, Wai‐Ki Ip, Ruslan Medzhitov
SJR Q1CellOA
ImmunologyImmunology and Microbiology
13
Article|72 citations·2020
Viral hijacking of the TENT4–ZCCHC14 complex protects viral RNAs via mixed tailing
Dong-Wan Kim, Young-Suk Lee, Soo Jin Jung, Jinah Yeo, Jenny J. Seo, Young-Yoon Lee, Jaechul Lim, Hyeshik Chang, Jaewon Song, Ji-Hye Yang, Jong‐Seo Kim, Guhung Jung
SJR Q1Nature Structural & Molecular Biology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Article|72 citations·2022
Viperin triggers ribosome collision-dependent translation inhibition to restrict viral replication
Jack Chun-Chieh Hsu, Maudry Laurent-Rolle, Joanna B. Pawlak, Hongjie Xia, Amit Kunte, Jia Shee Hee, Jaechul Lim, Lawrence D. Harris, James M. Wood, Gary B. Evans, Pei‐Yong Shi, Tyler L. Grove
SJR Q1Molecular CellOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Article|68 citations·2021
Colon cancer cells acquire immune regulatory molecules from tumor-infiltrating lymphocytes by trogocytosis
Jae Hun Shin, Jaekwang Jeong, Stephen E. Maher, Heon‐Woo Lee, Jaechul Lim, Alfred L.M. Bothwell
SJR Q1Proceedings of the National Academy of SciencesOA

Significance We have identified the presence of cancer cells harboring immune cell–specific surface marker proteins such as CD4 in the tumor microenvironment. Cancer cells acquired not only the T cell marker protein CD4 but also immune regulatory molecules such as CTLA4 by trogocytosis. Unlike other endocytic mechanisms, trogocytosis maintains the cellular localization and functions of the transferred membrane proteins. Therefore, trogocytic transfer of immune regulatory molecules enhances the i

ImmunologyImmunology and Microbiology

Research Areas

Molecular BiologyOncologyImmunologyCancer ResearchEpidemiologyPhysiology

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