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Ji-Hyun Geum

Hanyang University · Medicine

About the Lab

Professor Ji-Hyun Geum's research lab specializes in maternal-fetal and reproductive health, with a focus on understanding the microbiome's role in neonatal development, particularly in preterm and term infants. The lab employs advanced genomic technologies—such as third-generation long-read sequencing (Oxford Nanopore) and bioinformatics—to explore gut microbiome composition and its implications for early-life health outcomes. Additional research directions include clinical diagnostics in gynecological conditions like ovarian pregnancy, medication use in autoimmune diseases during pregnancy (e.g., SLE and rheumatoid arthritis), and the biological impact of parasitic infections on reproductive function. The lab integrates clinical data, molecular biology, and population-level health databases to improve perinatal outcomes and inform precision medicine strategies.

neonatal microbiomepregnancy outcomesreproductive healthlong-read sequencingautoimmune disease in pregnancy

Research Overview

Papers
18
Total Citations
70
Papers (5y)
16
Primary Field
Medicine

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
16total
2022
2023
2024
2025
2026
Citations per year (5y)
52total
20222023202420252026

Selected Papers

15
1
Article|19 citations·2023
Gut microbiome profiling of neonates using Nanopore MinION and Illumina MiSeq sequencing
Teahyen Cha, Hoo Hugo Kim, Jihyun Keum, Min‐Jin Kwak, Jae Yong Park, Jeong‐Kyu Hoh, Chang‐Ryul Kim, Byong‐Hun Jeon, Hyun‐Kyung Park
SJR Q1Frontiers in MicrobiologyOA

This study aimed to evaluate the difference in gut microbiomes between preterm and term infants using third-generation long-read sequencing (Oxford Nanopore Technologies, ONT) compared with an established gold standard, Illumina (second-generation short-read sequencing). A total of 69 fecal samples from 51 term (T) and preterm (P) infants were collected at 7 and 28 days of life. Gut colonization profiling was performed by 16S rRNA gene sequencing using ONT. We used Illumina to validate and compa

Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|18 citations·2017
Preoperative diagnostic clues to ovarian pregnancy: retrospective chart review of women with ovarian and tubal pregnancy
Mi Rang Seo, Joong Sub Choi, Jaeman Bae, Won Moo Lee, Jeong Min Eom, Eunhyun Lee, Jihyun Keum
SJR Q2Obstetrics & Gynecology ScienceOA

OBJECTIVE: To analyze the preoperative diagnostic clues to ovarian pregnancy (OP). METHODS: This study conducted a retrospective chart review of 23 patients with OP and 46 patients with tubal pregnancy (TP) from October 1, 2003 to September 31, 2016 in Hanyang University Hospital. RESULTS: =0.039) in surgical findings. CONCLUSION: For the patients in whom a gestational sac is not detected in the uterus or the fallopian tubes, it is important to be aware of the possibility of OP and rupture of an

Public Health, Environmental and Occupational HealthMedicine
3
Article|10 citations·2023
Insights into prokaryotic metataxonomics and predictive metabolic function in field-scale anaerobic digesters treating various organic wastes
Hoo Hugo Kim, Bikram Basak, Dong-Yeol Lee, Woo Jin Chung, Soon Woong Chang, Min‐Jin Kwak, Seung Hyun Kim, Jae Kyoon Hwang, Jihyun Keum, Hyun‐Kyung Park, Geon-Soo Ha, Kwang Ho Kim
SJR Q1Renewable and Sustainable Energy Reviews
Building and ConstructionEngineering
4
Article|8 citations·2023
Identifying pregnancy episodes and estimating the last menstrual period using an administrative database in Korea: an application to patients with systemic lupus erythematosus
Yu-Seon Jung, Yeo‐Jin Song, Jihyun Keum, Ju Won Lee, Eun Jin Jang, Soo‐Kyung Cho, Yoon‐Kyoung Sung, Sun‐Young Jung
SJR Q2Epidemiology and HealthOA

OBJECTIVES: This study developed an algorithm for identifying pregnancy episodes and estimating the last menstrual period (LMP) in an administrative claims database and applied it to investigate the use of pregnancy-incompatible immunosuppressants among pregnant women with systemic lupus erythematosus (SLE). METHODS: An algorithm was developed and applied to a nationwide claims database in Korea. Pregnancy episodes were identified using a hierarchy of pregnancy outcomes and clinically plausible

Public Health, Environmental and Occupational HealthMedicine
5
Article|8 citations·2024
Medication utilisation trends during pregnancy and factors influencing adverse pregnancy outcomes in patients with rheumatoid arthritis
Yeo‐Jin Song, Soo‐Kyung Cho, Yu-Seon Jung, Sun‐Young Jung, Jihyun Keum, Eunwoo Nam, Yoon‐Kyoung Sung, Dae‐Hyun Yoo
SJR Q1RMD OpenOA

OBJECTIVES: We aimed to investigate medication utilisation trends during pregnancy and identify factors associated with adverse pregnancy outcomes (APOs) in patients with rheumatoid arthritis (RA). METHODS: Female patients with RA aged 20-50 years were identified from the Korean national health insurance database between 2010 and 2020. Pregnancy episodes were divided into two groups according to pregnancy outcome: the delivery group and the APO group (abortion and stillbirth). The characteristic

Public Health, Environmental and Occupational HealthMedicine
6
Article|2 citations·2022
Laparoscopic systemic restaging surgery for women with unexpected uterine malignancy
Eun Bi Kim, Hyeon Myeong Hong, Won Moo Lee, Joong Sub Choi, Jaeman Bae, Un Suk Jung, Jeong Min Eom, Jihyun Keum
SJR Q2Obstetrics & Gynecology ScienceOA

OBJECTIVE: We investigated the feasibility of laparoscopic restaging surgery in patients with unexpected uterine cancer. METHODS: This retrospective study included eight patients who underwent laparoscopic restaging surgery for Iran University uterine cancer after a prior hysterectomy or myomectomy. RESULTS: The median age of the patients and their body mass index were 55 years (range, 44-78) and 23.8 kg/m2 (range, 20.75- 31.89), respectively. The median interval between the prior hysterectomy a

Obstetrics and GynecologyMedicine
7
Article|2 citations·2022
Excretory-Secretory Products of Trichomonas vaginalis Cause Apoptosis in Mouse Sperm in Vitro
Jihyun Keum, Jaesook Roh, Jae‐Sook Ryu, Ki‐Young Ryu
Korean Journal of ParasitologyOA

Excretory-secretory products (ESP) of T. vaginalis have been shown to inhibit sperm motility, viability, and functional integrity, leading to a decreased fertilization rate in vitro. This study investigated whether T. vaginalis induce apoptosis and ultrastructural changes of sperm using flow cytometry and electron microscopy. Incubation of sperm with T. vaginalis ESP increased phosphatidylserine externalization and DNA fragmentation, and decreased mitochondrial membrane potential. Transmission e

Reproductive MedicineMedicine
8
Article|1 citations·2023
Diagnostic Clues for Women with Acute Surgical Abdomen Associated with Ruptured Endometrioma
Jihyun Keum, Won Moo Lee, Joong Sub Choi, Jaeman Bae, Seongsil Cho, Bo-Kyeong Kang
SJR Q2Journal of Personalized MedicineOA

(1) Background: An investigation of the preoperative diagnostic clues used to identify ruptured endometrioma by comparing the ruptured and unruptured states in patients who underwent laparoscopic operations due to endometrioma. (2) Methods: Patients with ruptured endometriomas (14 patients) and unruptured endometriomas (60 patients) were included, and clinical symptoms, laboratory findings, and radiological findings were analyzed. (3) Results: There were no significant differences in age, parity

Reproductive MedicineMedicine
9
Article|1 citations·2025
Altered heme metabolism and hemoglobin concentration due to empirical antibiotics-induced gut dysbiosis in preterm infants
Seung Hyun Kim, Min‐Jin Kwak, Jae Kyoon Hwang, Jihyun Keum, Hee Yeon Jin, Chan-Yeong Lee, Rahul S. Tanpure, Yong Joo Kim, Jeong‐Kyu Hoh, Jae Yong Park, Woojin Chung, Byong‐Hun Jeon
SJR Q1Computational and Structural Biotechnology JournalOA

Abstract Background High-risk infants are usually treated with empirical antibiotics after birth, regardless of the evidence of infection; however, their gut microbiome and metabolome have seldom been studied. This study investigated the influence of antibiotic exposure on the gut microbiome and associated metabolic pathways in term and preterm infants. Methods Thirty-six infants within 10 days of birth who were admitted to a neonatal intensive care unit/newborn nursery unit were divided into fo

Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
Article|1 citations·2024
The Correlation between Sex Hormone-Binding Globulin and Clinical Characteristics According to Anti-Müllerian Hormone in Women with Regular Menstrual Cycles: A Prospective Study
Jihyun Keum, Yong Jin Kim, Sae Kyung Choi, Won Moo Lee, Jaeman Bae
SJR Q2Journal of Personalized MedicineOA

Background: Polycystic ovarian syndrome (PCOS) can be diagnosed when the anti-Müllerian hormone (AMH) levels are high, but in clinic, women who do not meet the diagnosis of PCOS but have elevated AMH levels are often seen. This study aimed to compare the differences in menstrual cycle patterns and hormone levels in women with regular menstrual cycles, but not PCOS, by dividing them into high and low AMH groups. Material and Methods: This multicenter prospective study included 68 healthy women. P

Reproductive MedicineMedicine
11
Article|0 citations·2022
Radioactive Iodine-induced hypothyroidism interferes with the maturation of reproductive organs during puberty in immature female rats
Jihyun Keum, Ki‐Young Ryu, Jaesook Roh
SJR Q2Toxicological ResearchOA
Endocrinology, Diabetes and MetabolismMedicine
12
Article|0 citations·2025
Effect of high caffeine exposure on longitudinal bone growth during puberty in immature female rats
Jihyun Keum, Yuri Choi, Ki‐Young Ryu, Jeonghyeon Lee, Jaesook Roh
SJR Q2Toxicological ResearchOA
PharmacologyMedicine
13
Article|0 citations·2026
Gestational diabetes mellitus and maternal-infant microbiome axis: mechanistic insights and therapeutic interventions
Jinjoo Choi, Jihyun Keum, Min‐Jin Kwak, Seung Hyun Kim, Jeong Kyu Hoh, Byong‐Hun Jeon, Hyun-kyung Park
SJR Q1Journal of Translational MedicineOA

BACKGROUND: Gestational diabetes mellitus (GDM) alters maternal metabolism and the gut microbiota, thereby significantly affecting neonatal health. This narrative review synthesizes current clinical and translational evidence on temporal changes in the maternal gut microbiota across the three pregnancy trimesters in women with GDM and examines its subsequent impact on neonatal microbiome composition, immune development, and long-term disease risk. MAIN BODY: GDM-associated dysbiosis has been rep

Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Preprint|0 citations·2025
Impact of the interruption of tamoxifen for pregnancy on the recurrence and survival outcomes among young women with breast cancer
Chihwan Cha, Somin Jeon, Jihyun Keum, Shin Jeong Pak, Boyoung Park, Min Sung Chung
SSRN Electronic JournalOA
OncologyMedicine
15
Article|0 citations·2023
LSO-085 Nationwide patterns and factors associated with adverse pregnancy outcomes in women with systemic lupus erythematosus
Yu-Seon Jung, Yeo‐Jin Song, Jihyun Keum, Soo‐Kyung Cho, Yoon‐Kyoung Sung, Sun‐Young Jung
OA

<h3>Background</h3> Systemic Lupus Erythematosus (SLE) is predominant in women of childbearing age. Careful family planning is required because SLE disease activity and SLE therapy affect the risk of adverse pregnancy outcomes (APOs). This study investigates prevalence and risk factors of APOs (Pre-term birth (PB), pre-eclampsia/eclampsia). <h3>Methods</h3> We conducted a cohort study of pregnancies in women with SLE using the National Health Insurance Service (NHIS) database of Korea (2002–2018

Public Health, Environmental and Occupational HealthMedicine

Research Areas

Molecular BiologyPublic Health, Environmental and Occupational HealthReproductive MedicineOncologyBuilding and ConstructionObstetrics and Gynecology

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