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Jung Ok Shim

Seoul National University · Medicine

About the Lab

Professor Jung Ok Shim's research lab focuses on pediatric inflammatory bowel disease (IBD), with a particular emphasis on the genetic and immunological mechanisms underlying very early-onset and neonatal-onset IBD. The lab investigates the role of innate immunity, gut barrier dysfunction, and microbial dysbiosis in disease pathogenesis, especially in genetically susceptible infants. Their work also includes epidemiological studies on pediatric systemic illnesses such as Henoch-Schönlein purpura (HSP) and rotavirus infections in preterm infants, aiming to improve clinical management and public health strategies.

pediatric IBDneonatal-onset IBDgut microbiotagenetic mutationsimmune dysregulation

Research Overview

Papers
73
Total Citations
1,597
Papers (5y)
24
Primary Field
Medicine

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
24total
2022
2023
2024
2025
2026
Citations per year (5y)
137total
20222023202420252026

Selected Papers

15
1
Article|75 citations·2014
Very early-onset inflammatory bowel disease (IBD) in infancy is a different disease entity from adult-onset IBD; one form of interleukin-10 receptor mutations
Jung Ok Shim, Jeong Kee Seo
SJR Q2Journal of Human Genetics
GeneticsBiochemistry, Genetics and Molecular Biology
2
Article|64 citations·2013
Interleukin-10 receptor mutations in children with neonatal-onset Crohn’s disease and intractable ulcerating enterocolitis
Jung Ok Shim, Solha Hwang, Hye Ran Yang, Jin Soo Moon, Ju Young Chang, Jae Sung Ko, Sung Sup Park, Gyeong Hoon Kang, Woo Sun Kim, Jeong Kee Seo
SJR Q2European Journal of Gastroenterology & HepatologyOA

Neonatal-onset inflammatory bowel disease (IBD) accounts for only 0.25% of pediatric IBD cases. The molecular pathogenesis of IBD remains unclear. Recently, rare Mendelian mutations have been identified in children with very early-onset Crohn's disease and ulcerative colitis. In this study, we report compound heterozygous mutations in the interleukin-10 receptor A (IL-10RA) gene in children with severe neonatal-onset IBD. Patient 1 had chronic diarrhea within the first month of life and had peri

GeneticsBiochemistry, Genetics and Molecular Biology
3
Review|56 citations·2013
Gut Microbiota in Inflammatory Bowel Disease
Jung Ok Shim
SJR Q2Pediatric Gastroenterology Hepatology & NutritionOA

The gut mucosal barrier plays an important role in maintaining a delicate immune homeostasis. The pathogenesis of inflammatory bowel disease (IBD) is considered to involve a defective mucosal immunity along with a genetic predisposition. Recent views have suggested an excessive response to components of the gut microbiota in IBD. A condition of "dysbiosis", with alterations of the gut microbial composition, has been observed in patients with IBD. In this article, the author review recent studies

Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Review|50 citations·2019
Recent Advance in Very Early Onset Inflammatory Bowel Disease
Jung Ok Shim
SJR Q2Pediatric Gastroenterology Hepatology & NutritionOA

Recent studies on pediatric inflammatory bowel disease (IBD) have revealed that early-onset IBD has distinct phenotypic differences compared with adult-onset IBD. In particular, very early-onset IBD (VEO-IBD) differs in many aspects, including the disease type, location of the lesions, disease behavior, and genetically attributable risks. Several genetic defects that disturb intestinal epithelial barrier function or affect immune function have been noted in these patients from the young age grou

GeneticsBiochemistry, Genetics and Molecular Biology
5
Article|40 citations·2018
Ten-year Nationwide Population-based Survey on the Characteristics of Children with Henoch-Schӧnlein Purpura in Korea
Jung Ok Shim, Kyungdo Han, Sang Hyun Park, Gun-Ha Kim, Jae Sung Ko, Ju‐Young Chung
SJR Q2Journal of Korean Medical ScienceOA

The annual incidence of HSP is 55.9 per 100,000 children which is higher in Korea than that in other countries. Younger children can have a more severe clinical course. This nationwide survey provides valuable information to understand HSP in children and to inspire further research on HSP.

Pulmonary and Respiratory MedicineMedicine
6
Article|34 citations·2012
Clinical Characteristics and Genotypes of Rotaviruses in a Neonatal Intensive Care Unit
Jung Ok Shim, Dong Woo Son, So‐Yeon Shim, Eell Ryoo, Wonyong Kim, Yeon-Chang Jung
SJR Q2Pediatrics & NeonatologyOA

Systemic illness signs such as feeding difficulty and neutropenia are specific for preterm infants with rotavirus infections. G4P[6] was exclusive, regardless of preterm birth or locations of infections. This study might be helpful in developing policies for management and prevention of rotavirus infections in NICUs.

Infectious DiseasesMedicine
7
Article|27 citations·2016
Changing distribution of age, clinical severity, and genotypes of rotavirus gastroenteritis in hospitalized children after the introduction of vaccination: a single center study in Seoul between 2011 and 2014
Jung Ok Shim, Ju Young Chang, Sue Shin, Jin Soo Moon, Jae Sung Ko
SJR Q1BMC Infectious DiseasesOA

Increase in age of infected, hospitalized children was accompanied by change in clinical severity during 2011-2014 after the introduction of vaccines in Seoul. Clinical severity was also associated with vaccination status and genotype. Long-term large scale studies are needed to document the significance of the increase in genotypes of uncommon and mixed combinations.

Infectious DiseasesMedicine
8
Article|26 citations·2023
Gut Bacterial Dysbiosis in Irritable Bowel Syndrome: a Case-Control Study and a Cross-Cohort Analysis Using Publicly Available Data Sets
Gun-Ha Kim, Kihyun Lee, Jung Ok Shim
SJR Q1Microbiology SpectrumOA

Research on the gut bacteria in irritable bowel syndrome (IBS) shows discordant results due to inconsistent study designs or small sample sizes. To overcome these issues, we analyzed microbiota of 567 IBS patients and 487 healthy people from 10 shared data sets using a unified method. We demonstrated that gut bacteria are less diverse in IBS patients than in healthy people. In addition, the abundance of 21 bacterial species is different between the two groups. Altered bacterial balance, called d

Molecular BiologyBiochemistry, Genetics and Molecular Biology
9
Review|23 citations·2014
Clostridium difficilein Children: To Treat or Not to Treat?
Jung Ok Shim
SJR Q2Pediatric Gastroenterology Hepatology & NutritionOA

Clostridium difficile infection has been increasing since 2000 in children and in adults. Frequent antibiotics use, comorbidity, and the development of hypervirulent strains have increased the risk of infection. Despite the high carriage rates of C. difficile, infants rarely develop clinical infection. Discontinuing antibiotics and supportive management usually leads to resolution of disease. Antibiotics use should be stratified depending on the patient's age and severity of the disease.

Infectious DiseasesMedicine
10
Article|17 citations·2011
Molecular characterization of rotavirus diarrhea among children in South Korea: detection of an unusual G11 strain
Jung Ok Shim, In Hyuk Baek, Van Phan Le, Eun-Mi Ko, Won-Seok Seok, Young Uh, Ja Kyoung Kim, Sung Yeon Ahn, Hyeon Soo Lee, Eell Ryoo, So‐Yeon Shim, Wonkeun Song
SJR Q2Archives of VirologyOA
Infectious DiseasesMedicine
11
Article|14 citations·2018
Recent advance in very early-onset inflammatory bowel disease
Jung Ok Shim
SJR Q2Intestinal ResearchOA

Recent studies on pediatric inflammatory bowel disease (IBD) have revealed that early-onset IBD has distinct phenotypic differences compared with adult-onset IBD. In particular, very early-onset IBD (VEO-IBD) differs in many aspects, including the disease type, location of the lesions, disease behavior, and genetically attributable risks. Neonatal or infantile-onset IBD develops in less than 1% of pediatric patients. Children with infantile-onset IBD have high rates of affected first-degree rela

GeneticsBiochemistry, Genetics and Molecular Biology
12
Article|13 citations·2020
Percutaneous Endoscopic Gastrostomy and Nutritional Interventions by the Pediatric Nutritional Support Team Improve the Nutritional Status of Neurologically Impaired Children
Chae-ri Suh, Wonkyung Kim, Baik‐Lin Eun, Jung Ok Shim
SJR Q1Journal of Clinical MedicineOA

Aim: To evaluate the long-term effects of nutritional improvement following percutaneous endoscopic gastrostomy (PEG) tube feeding stratified by previous feeding method and to assess the impact of underlying muscle tone on the outcomes of the nutritional intervention. Methods: Neurologically impaired children who underwent PEG tube insertion and nutritional intervention provided by a pediatric nutritional support team were enrolled. We measured anthropometric variables, laboratory parameters, an

Nutrition and DieteticsNursing
13
Article|11 citations·2013
Distribution of rotavirus G and P genotypes approximately two years following the introduction of rotavirus vaccines in South Korea
Jung Ok Shim, Van Thai Than, Eell Ryoo, Inseok Lim, Yoosik Yoon, Kijeong Kim, Sang‐In Chung, Wonyong Kim
SJR Q1Journal of Medical Virology

Genotyping of human rotaviruses was performed on 299 (40.1%) rotavirus-positive samples obtained from 745 children with acute diarrhea in three provinces in South Korea between March 2008 and February 2010, approximately 2 years following the introduction of the RotaTeq (September 2007) and Rotarix (July 2008). The most prevalent G genotypes were G1 (51.5%), followed by G3 (24.0%), G4 (15.4%), G9 (6.4%), and G2 (4.7%). The predominant types of P genotypes were P[8] (72.6%), followed by P[6] (19.

Infectious DiseasesMedicine
14
Article|10 citations·2020
Effect of nutritional supplement formula on catch-up growth in young children with nonorganic faltering growth: a prospective multicenter study
Jung Ok Shim, Seung Kim, Byung‐Ho Choe, Ji‐Hyun Seo, Hye Ran Yang
SJR Q2Nutrition Research and PracticeOA

Nutritional supplementation with a concentrated and balanced pediatric nutritional formula along with dietary education might be an effective approach to promote catch-up growth in children with nonorganic faltering growth.

Psychiatry and Mental healthMedicine
15
Article|9 citations·2011
Underweight in Adolescents
Jung Ok Shim
Korean Journal of Pediatric Gastroenterology and NutritionOA

There are few studies of underweight in adolescents in Korea and other developed countries.According to the recent surveillance in Korea, prevalence of underweight in adolescents is lower than those in developing countries, and higher than those in developed countries in Northern Europe.This article reviews the problems, diagnosis, and nutritional support of underweight in adolescents.(

Public Health, Environmental and Occupational HealthMedicine

Research Areas

Infectious DiseasesGeneticsSurgeryMolecular BiologyPublic Health, Environmental and Occupational HealthGastroenterology

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