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Kyunghee Kim

Ewha Womans University · Medicine

About the Lab

Professor Kyunghee Kim's research lab specializes in molecular genetics, plant genomics, and bioactive natural products, with a focus on chloroplast and nuclear genome evolution in plants, particularly in economically and medicinally important species such as rice, ginseng, and Araliaceae. The lab employs next-generation sequencing technologies to decode complete chloroplast and ribosomal DNA sequences, enabling detailed phylogenomic and population genetic analyses. Additionally, the lab investigates bioactive compounds from plant byproducts—such as levan from *Zymomonas mobilis* and polyphenols from *Rubus coreanus*—for potential applications in cosmeceuticals and antiviral therapeutics.

plant genomicschloroplast genomebioactive compoundsantiviral natural productsnext-generation sequencing

Research Overview

Papers
430
Total Citations
15,694
Papers (5y)
24
Primary Field
Medicine

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
24total
2022
2023
2024
2025
2026
Citations per year (5y)
384total
20222023202420252026

Selected Papers

15
1
Article|229 citations·2004
Mutations of the BRAF Gene in Papillary Thyroid Carcinoma in a Korean Population
Kyung‐Hee Kim, Dong‐Wook Kang, Seong Ho Kim, In Ock Seong, Dae Young Kang
SJR Q2Yonsei Medical JournalOA

The B-type Raf kinase (BRAF) protein is a serine/threonine kinase that has an important role in cellular proliferation, differentiation, and programmed cell death. The BRAF gene has been recently found to be mutated in human carcinomas, predominantly in malignant melanoma. The aim of this study was to investigate the frequency of the BRAF mutation in papillary thyroid carcinoma (PTC) of Koreans through direct DNA sequencing of the polymerase chain reaction (PCR)- amplified exon 15 with clinicopa

Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|212 citations·2015
Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species
Kyung‐Hee Kim, Sang-Choon Lee, Junki Lee, Yeisoo Yu, Kiwoung Yang, Beom-Soon Choi, Hee‐Jong Koh, Nomar Espinosa Waminal, Hong-Il Choi, Nam‐Hoon Kim, Woojong Jang, Hyun-Seung Park
SJR Q1Scientific ReportsOA

Cytoplasmic chloroplast (cp) genomes and nuclear ribosomal DNA (nR) are the primary sequences used to understand plant diversity and evolution. We introduce a high-throughput method to simultaneously obtain complete cp and nR sequences using Illumina platform whole-genome sequence. We applied the method to 30 rice specimens belonging to nine Oryza species. Concurrent phylogenomic analysis using cp and nR of several of specimens of the same Oryza AA genome species provides insight into the evolut

Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
Article|188 citations·2015
Comprehensive Survey of Genetic Diversity in Chloroplast Genomes and 45S nrDNAs within Panax ginseng Species
Kyung‐Hee Kim, Sang‐Choon Lee, Junki Lee, Hyun Oh Lee, Ho Jun Joh, Nam‐Hoon Kim, Hyun-Seung Park, Tae‐Jin Yang
SJR Q1PLoS ONEOA

We report complete sequences of chloroplast (cp) genome and 45S nuclear ribosomal DNA (45S nrDNA) for 11 Panax ginseng cultivars. We have obtained complete sequences of cp and 45S nrDNA, the representative barcoding target sequences for cytoplasm and nuclear genome, respectively, based on low coverage NGS sequence of each cultivar. The cp genomes sizes ranged from 156,241 to 156,425 bp and the major size variation was derived from differences in copy number of tandem repeats in the ycf1 gene and

Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Article|121 citations·2006
Cosmeceutical properties of levan produced by Zymomonas mobilis
Kyung‐Hee Kim, Christine B. Chung, Y. H. Kim, K. S. Kim, C. S. Han, C. H. Kim
SJR Q2International Journal of Cosmetic Science

Levan, a polysaccharide that can be produced by both plants and microorganisms, is a sugar polymer composed of fructose, with beta-2,6 linkages. Here, we have attempted to assess the possible use of levan produced by Zymomonas mobilis as a cosmeceutical ingredient. In service of this goal, we assessed a host of levan's properties, including its moisturizing effects, cell cytotoxicity, cell proliferation effects, and anti-inflammation effects. Levan exhibited a moisturizing effect that was almost

Nutrition and DieteticsNursing
5
Article|110 citations·2011
Overexpression of a chloroplast-localized small heat shock protein OsHSP26 confers enhanced tolerance against oxidative and heat stresses in tall fescue
Kyung‐Hee Kim, Iftekhar Alam, Yonggoo Kim, Shamima Akhtar Sharmin, Ki‐Won Lee, Sang‐Hoon Lee, Byung‐Hyun Lee
SJR Q2Biotechnology Letters
Molecular BiologyBiochemistry, Genetics and Molecular Biology
6
Article|103 citations·2017
Association of PD-L1 expression and PD-L1 gene polymorphism with poor prognosis in lung adenocarcinoma and squamous cell carcinoma
Min‐Kyung Yeo, Song‐Yi Choi, In‐Ock Seong, Kwang‐Sun Suh, Jin‐Man Kim, Kyung‐Hee Kim
SJR Q1Human Pathology
OncologyMedicine
7
Article|91 citations·2024
Integrated proteogenomic characterization of glioblastoma evolution
Kyung‐Hee Kim, Simona Migliozzi, Harim Koo, Jun-Hee Hong, Seung Min Park, Sooheon Kim, Hyung Joon Kwon, Seokjun Ha, Luciano Garofano, Young Taek Oh, Fulvio D’Angelo, Chan Il Kim
SJR Q1Cancer CellOA
GeneticsMedicine
8
Article|78 citations·2017
Evolution of the Araliaceae family inferred from complete chloroplast genomes and 45S nrDNAs of 10 Panax-related species
Kyung‐Hee Kim, Van Binh Nguyen, Jingzhou Dong, Ying Wang, Jee Young Park, Sang‐Choon Lee, Tae‐Jin Yang
SJR Q1Scientific ReportsOA

We produced complete sequences and conducted comparative analysis of the maternally inherited chloroplast (cp) genomes and bi-parentally inherited 45S nuclear ribosomal RNA genes (nrDNA) from ten Araliaceae species to elucidate the genetic diversity and evolution in that family. The cp genomes ranged from 155,993 bp to 156,730 bp with 97.1-99.6% similarity. Complete 45S nrDNA units were about 11 kb including a 5.8-kb 45S cistron. Among 79 cp protein-coding genes, 74 showed nucleotide variations

Molecular BiologyBiochemistry, Genetics and Molecular Biology
9
Article|77 citations·2016
Antiviral Effects of Black Raspberry (Rubus coreanus) Seed and Its Gallic Acid against Influenza Virus Infection
Ji-Hye Lee, Mi Oh, Jong Hyeon Seok, Sella Kim, Dan Lee, Garam Bae, Hae-In Bae, Seon Young Bae, Young-Min Hong, Sang-Oh Kwon, Dong‐Hun Lee, Chang‐Seon Song
SJR Q1VirusesOA

Influenza is a serious public health concern worldwide, as it causes significant morbidity and mortality. The emergence of drug-resistant viral strains requires new approaches for the treatment of influenza. In this study, Rubus coreanus seed (RCS) that is left over from the production of wine or juice was found to show antiviral activities against influenza type A and B viruses. Using the time-of-addition plaque assay, viral replication was almost completely abolished by simultaneous treatment

EpidemiologyMedicine
10
Article|76 citations·2008
Effect of Nafion® gradient in dual catalyst layer on proton exchange membrane fuel cell performance
Kyung‐Hee Kim, Hong‐Gee Kim, Ki Bong Lee, Jong Hyun Jang, Steven Lee, Eunae Cho, In‐Hwan Oh, Tak‐Hyoung Lim
SJR Q1International Journal of Hydrogen Energy
Electrical and Electronic EngineeringEngineering
11
Article|74 citations·2020
Genetic and Functional Analyses Point to FAN1 as the Source of Multiple Huntington Disease Modifier Effects
Kyung‐Hee Kim, Eun Pyo Hong, Jun Wan Shin, Michael J. Chao, Jacob M. Loupe, Tammy Gillis, Jayalakshmi Srinidhi Mysore, Peter Holmans, Lesley Jones, Michael Orth, Darren G. Monckton, Jeffrey D. Long
SJR Q1The American Journal of Human GeneticsOA
Cellular and Molecular NeuroscienceNeuroscience
12
Article|72 citations·2005
Mutations of the BRAF gene in papillary thyroid carcinoma and in Hashimoto's thyroiditis
Kyung‐Hee Kim, Kwang‐Sun Suh, Dong‐Wook Kang, Dong‐Wook Kang, Dae‐Young Kang, Dae‐Young Kang
SJR Q1Pathology International

The purpose of the present study was to investigate the frequency of BRAF mutations in human papillary thyroid carcinoma (PTC) and Hashimoto's thyroiditis (HT) and to evaluate the association of the BRAF mutation with the clinicopathological features of both of these thyroid disorders. A total of 51 PTC with no HT, 28 PTC with HT and 27 HT with no PTC were evaluated using DNA extracted from paraffin-embedded specimens. BRAF mutations were analyzed by direct DNA sequencing of the polymerase chain

Endocrinology, Diabetes and MetabolismMedicine
13
Article|69 citations·2006
Interaction between Tie receptors modulates angiogenic activity of angiopoietin2 in endothelial progenitor cells
Kyung‐Hee Kim, Il-Woo Shin, Jiyoung Kim, J CHOI, J. Byun, Eun Jung Jeon, Wonhee Suh, Dong-Hyun Kim
SJR Q1Cardiovascular ResearchOA

In contrast with its roles in mature endothelial cells, Ang2 has proangiogenic activities in EPC directly through Tie2 signaling pathway. Such a cell-dependent differential reactivity of Ang2 was for the first time found to be modulated by physical association between Tie1 and Tie2, which inhibited Ang2-mediated Tie2 activation.

Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Article|68 citations·2009
<I>Raffaelea quercus-mongolicae</I> sp. nov. associated with <I>Platypus koryoensis</I> on oak in Korea
Kyung‐Hee Kim, Young‐Joon Choi, Sang‐Tae Seo, Hyeon-Dong Shin
SJR Q3MycotaxonOA

Volume: 110

EcologyEnvironmental Science
15
Article|67 citations·2004
Purification, Cloning and Functional Expression of hydroxyphenylpyruvate Reductase Involved in Rosmarinic Acid Biosynthesis in Cell Cultures of Coleus Blumei
Kyung‐Hee Kim, Verena Janiak, Maike Petersen
SJR Q1Plant Molecular Biology
Molecular BiologyBiochemistry, Genetics and Molecular Biology

Research Areas

Molecular BiologyOncologyPharmacologySurgeryPulmonary and Respiratory MedicineGenetics

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