Skip to main content

Sang Yup Lee

Korea Advanced Institute of Science and Technology · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Sang Yup Lee's research lab specializes in systems metabolic engineering and synthetic biology, focusing on the sustainable production of chemicals, biofuels, and biodegradable materials from renewable resources. The lab develops microbial cell factories through advanced genetic tools and rational protein engineering, with key research directions including the metabolic engineering of bacteria for bioproduction and the enzymatic degradation of plastics such as PET and butanol. The lab also pioneers innovative genetic systems, such as CRISPR-Cas9, to enable precise genome editing in recalcitrant actinomycetes for industrial biotechnology applications.

systems metabolic engineeringbiodegradable plasticsenzyme engineeringmicrobial cell factoriessustainable bioproduction

Research Overview

Papers
406
Total Citations
68,685
Papers (5y)
46
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
46total
2020
2021
2022
2023
2025
Citations per year (5y)
5,432total
20202021202220232025

Selected Papers

15
1
Review|1,040 citations·2008
Fermentative butanol production by clostridia
Sang Yup Lee, Jin Hwan Park, Seh Hee Jang, Lars K. Nielsen, Jae Hyun Kim, Kwang S. Jung
SJR Q2Biotechnology and BioengineeringOA

Butanol is an aliphatic saturated alcohol having the molecular formula of C(4)H(9)OH. Butanol can be used as an intermediate in chemical synthesis and as a solvent for a wide variety of chemical and textile industry applications. Moreover, butanol has been considered as a potential fuel or fuel additive. Biological production of butanol (with acetone and ethanol) was one of the largest industrial fermentation processes early in the 20th century. However, fermentative production of butanol had lo

Biomedical EngineeringEngineering
2
Review|877 citations·1996
High cell-density culture of Escherichia coli
Sang Yup Lee
SJR Q1Trends in biotechnology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
Article|795 citations·2006
Production of succinic acid by bacterial fermentation
Hyohak Song, Sang Yup Lee
SJR Q2Enzyme and Microbial Technology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Article|795 citations·2018
Structural insight into molecular mechanism of poly(ethylene terephthalate) degradation
Seongjoon Joo, In Jin Cho, Hogyun Seo, Hyeoncheol Francis Son, Hye-Young Sagong, Tae Joo Shin, So Young Choi, Sang Yup Lee, Kyung‐Jin Kim
SJR Q1Nature CommunicationsOA

Plastics, including poly(ethylene terephthalate) (PET), possess many desirable characteristics and thus are widely used in daily life. However, non-biodegradability, once thought to be an advantage offered by plastics, is causing major environmental problem. Recently, a PET-degrading bacterium, Ideonella sakaiensis, was identified and suggested for possible use in degradation and/or recycling of PET. However, the molecular mechanism of PET degradation is not known. Here we report the crystal str

PollutionEnvironmental Science
5
Article|766 citations·2000
Bacterial polyhydroxyalkanoates
Sang Yup Lee
SJR Q2Biotechnology and Bioengineering

Polyhydroxyalkanoates (PHAs) are polyesters of hydroxyalkanoates (HAs) synthesized by numerous bacteria as intracellular carbon and energy storage compounds and accumulated as granules in the cytoplasm of cells. More than 80 HAs have been detected as constituents of PHAs, which allows these thermoplastic materials to have various mechanical properties resembling hard crystalline polymer or elastic rubber depending on the incorporated monomer units. Even though PHAs have been recognized as good c

BiomaterialsMaterials Science
6
Article|647 citations·2013
Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs
Dokyun Na, Seung Min Yoo, Hannah Chung, Hyegwon Park, Jin Hwan Park, Sang Yup Lee
SJR Q1Nature Biotechnology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
7
Review|600 citations·2015
Systems strategies for developing industrial microbial strains
Sang Yup Lee, Hyun Uk Kim
SJR Q1Nature Biotechnology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
8
Article|587 citations·2019
A comprehensive metabolic map for production of bio-based chemicals
Sang Yup Lee, Hyun Uk Kim, Tong Un Chae, Jae Sung Cho, Je Woong Kim, Jae Ho Shin, Dong In Kim, Yoo-Sung Ko, Woo Dae Jang, Yu‐Sin Jang
SJR Q1Nature Catalysis
Molecular BiologyBiochemistry, Genetics and Molecular Biology
9
Article|551 citations·2019
Rational Protein Engineering of Thermo-Stable PETase from Ideonella sakaiensis for Highly Efficient PET Degradation
Hyeoncheol Francis Son, In Jin Cho, Seongjoon Joo, Hogyun Seo, Hye-Young Sagong, So Young Choi, Sang Yup Lee, Kyung‐Jin Kim
SJR Q1ACS Catalysis

Widespread utilization of polyethylene terephthalate (PET) has caused a variety of environmental and health problems; thus, the enzymatic degradation of PET can be a promising solution. Although PETase from Ideonalla sakaiensis (IsPETase) has been reported to have the highest PET degradation activity under mild conditions of all PET-degrading enzymes reported to date, its low thermal stability limits its ability for efficient and practical enzymatic degradation of PET. Using the structural infor

PollutionEnvironmental Science
10
Review|539 citations·2002
Microbial cell-surface display
Sang Yup Lee, Jong Hyun Choi, Zhaohui Xu
SJR Q1Trends in biotechnology
Radiology, Nuclear Medicine and ImagingMedicine
11
Article|524 citations·1996
Plastic bacteria? Progress and prospects for polyhydroxyalkanoate production in bacteria
Sang Yup Lee
SJR Q1Trends in biotechnology
BiomaterialsMaterials Science
12
Review|503 citations·2015
Biorefineries for the production of top building block chemicals and their derivatives
Sol Choi, Chan Woo Song, Jae Ho Shin, Sang Yup Lee
SJR Q1Metabolic Engineering
Molecular BiologyBiochemistry, Genetics and Molecular Biology
13
Review|459 citations·2020
Tools and strategies of systems metabolic engineering for the development of microbial cell factories for chemical production
Yoo‐Sung Ko, Je Woong Kim, Jong An Lee, Tae-Hee Han, Gi Bae Kim, Jeong Eum Park, Sang Yup Lee
SJR Q1Chemical Society Reviews

Sustainable production of chemicals from renewable non-food biomass has become a promising alternative to overcome environmental issues caused by our heavy dependence on fossil resources. Systems metabolic engineering, which integrates traditional metabolic engineering with systems biology, synthetic biology, and evolutionary engineering, is enabling the development of microbial cell factories capable of efficiently producing a myriad of chemicals and materials including biofuels, bulk and fine

Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Article|455 citations·2013
Microbial production of short-chain alkanes
Yong Jun Choi, Sang Yup Lee
SJR Q1Nature
Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Article|436 citations·2015
CRISPR-Cas9 Based Engineering of Actinomycetal Genomes
Yaojun Tong, Pep Charusanti, Lixin Zhang, Tilmann Weber, Sang Yup Lee
SJR Q1ACS Synthetic BiologyOA

Bacteria of the order Actinomycetales are one of the most important sources of pharmacologically active and industrially relevant secondary metabolites. Unfortunately, many of them are still recalcitrant to genetic manipulation, which is a bottleneck for systematic metabolic engineering. To facilitate the genetic manipulation of actinomycetes, we developed a highly efficient CRISPR-Cas9 system to delete gene(s) or gene cluster(s), implement precise gene replacements, and reversibly control gene

Molecular BiologyBiochemistry, Genetics and Molecular Biology

Research Areas

Molecular BiologyBiomaterialsBiomedical EngineeringPharmacologyEcologyGenetics

Dive deeper into Sang Yup Lee's research on Nubint

Open this lab's papers in the app to read with AI, summarize, and cite in your writing.