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Seung-Tae Bae

Pohang University of Science and Technology · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Seung-Tae Bae's research lab focuses on developmental biology and cancer biology, with a central emphasis on transcriptional regulation and signaling pathways in organ development and glioblastoma (GBM) pathogenesis. The lab investigates key transcription factors such as Tcf21 and signaling molecules like PDGF receptors and neurofibromin 1 (Nf1) in epicardial lineage commitment and epithelial-to-mesenchymal transition during heart development. In cancer research, the lab explores molecular mechanisms of therapeutic resistance in GBM, particularly the roles of DAB2IP and neuroligin 3 in regulating cancer stem cell properties and autophagy. The lab employs advanced genetic tools, including inducible Cre mouse models, to dissect cell lineage dynamics and signaling networks in vivo.

cardiac developmentglioblastomatranscription factorscancer stem cellsepithelial-mesenchymal transition

Research Overview

Papers
55
Total Citations
2,878
Papers (5y)
22
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
22total
2022
2023
2024
2025
2026
Citations per year (5y)
133total
20222023202420252026

Selected Papers

15
1
Article|777 citations·2010
Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe
Dong-Uk Kim, Jacqueline Hayles, Dongsup Kim, Valerie Wood, Han-Oh Park, Misun Won, Hyang‐Sook Yoo, Trevor Duhig, Miyoung Nam, Georgia Palmer, Sangjo Han, Linda Jeffery
SJR Q1Nature Biotechnology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|499 citations·2012
The bHLH transcription factor Tcf21 is required for lineage-specific EMT of cardiac fibroblast progenitors
Asha Acharya, Seung Tae Baek, Guo N. Huang, Banu Eskiocak, Sean C. Goetsch, Caroline Y. Sung, Serena Banfi, Marion F. Sauer, Gregory S. Olsen, Jeremy S. Duffield, Eric N. Olson, Michelle D. Tallquist
SJR Q1DevelopmentOA

The basic helix-loop-helix (bHLH) family of transcription factors orchestrates cell-fate specification, commitment and differentiation in multiple cell lineages during development. Here, we describe the role of a bHLH transcription factor, Tcf21 (epicardin/Pod1/capsulin), in specification of the cardiac fibroblast lineage. In the developing heart, the epicardium constitutes the primary source of progenitor cells that form two cell lineages: coronary vascular smooth muscle cells (cVSMCs) and card

Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
Article|334 citations·2011
Epicardial-Derived Cell Epithelial-to-Mesenchymal Transition and Fate Specification Require PDGF Receptor Signaling
Christopher L. Smith, Seung Tae Baek, Caroline Y. Sung, Michelle D. Tallquist
SJR Q1Circulation Research

RATIONALE: In early heart development, platelet-derived growth factor (PDGF) receptor expression in the heart ventricles is restricted to the epicardium. Previously, we showed that PDGFRβ is required for coronary vascular smooth muscle cell (cVSMC) development, but a role for PDGFRα has not been identified. Therefore, we investigated the combined and independent roles of these receptors in epicardial development. OBJECTIVE: To understand the contribution of PDGF receptors in epicardial developme

Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Article|164 citations·2011
Efficient inducible Cre‐mediated recombination in Tcf21cell lineages in the heart and kidney
Asha Acharya, Seung Tae Baek, Serena Banfi, Banu Eskiocak, Michelle D. Tallquist
SJR Q2genesis

Tcf21 is a Class II bHLH family member with essential roles in the formation of the lungs, kidneys, gonads, spleen, and heart. Here, we report the utility of a mouse line with targeted insertion of a tamoxifen-inducible Cre recombinase, MerCreMer at the Tcf21 locus. This mouse line will permit the inducible expression of Cre recombinase in Tcf21-expressing cells. Using ROSA26 reporter mice, we show that Cre recombinase is specifically and robustly activated in multiple Tcf21-expressing tissues d

Molecular BiologyBiochemistry, Genetics and Molecular Biology
5
Article|125 citations·2020
Wnt/β-catenin signaling pathway induces autophagy-mediated temozolomide-resistance in human glioblastoma
Eun-Jin Yun, Sangwoo Kim, Jer‐Tsong Hsieh, Seung Tae Baek
SJR Q1Cell Death and DiseaseOA

Temozolomide (TMZ) is widely used for treating glioblastoma multiforme (GBM), however, the treatment of such brain tumors remains a challenge due to the development of resistance. Increasing studies have found that TMZ treatment could induce autophagy that may link to therapeutic resistance in GBM, but, the precise mechanisms are not fully understood. Understanding the molecular mechanisms underlying the response of GBM to chemotherapy is paramount for developing improved cancer therapeutics. In

EpidemiologyMedicine
6
Article|124 citations·2015
An AKT3-FOXG1-reelin network underlies defective migration in human focal malformations of cortical development
Seung Tae Baek, Brett Copeland, Eun-Jin Yun, Seok‐Kyu Kwon, Alicia Guemez‐Gamboa, Ashleigh E. Schaffer, Sangwoo Kim, Hoon‐Chul Kang, Saera Song, Gary W. Mathern, Joseph G. Gleeson
SJR Q1Nature MedicineOA
GeneticsBiochemistry, Genetics and Molecular Biology
7
Article|97 citations·2014
Off-Target Effect of doublecortin Family shRNA on Neuronal Migration Associated with Endogenous MicroRNA Dysregulation
Seung Tae Baek, Géraldine Kerjan, Stephanie Bielas, Ji Eun Lee, Ali G. Fenstermaker, Gaia Novarino, Joseph G. Gleeson
SJR Q1NeuronOA
Cancer ResearchBiochemistry, Genetics and Molecular Biology
8
Article|43 citations·2023
Targeting Wnt/β-catenin-mediated upregulation of oncogenic NLGN3 suppresses cancer stem cells in glioblastoma
Eun-Jin Yun, Donghwi Kim, Sangwoo Kim, Jer‐Tsong Hsieh, Seung Tae Baek
SJR Q1Cell Death and DiseaseOA

Glioblastoma (GBM) is the most malignant tumor in brain and is highly resistant to therapy. Clinical evidence suggests increased number of cancer stem cells (CSCs) may contribute to the failure of conventional therapies, but the mechanisms associated with acquisition of CSC properties in GBM are not fully understood. We found that DAB2IP suppresses CSC properties by targeting the synaptic proteins neuroligin 3 (NLGN3) in GBM. Furthermore, we showed that GBM-derived NLGN3 has an oncogenic functio

Cancer ResearchBiochemistry, Genetics and Molecular Biology
9
Article|42 citations·2012
Nf1 limits epicardial derivative expansion by regulating epithelial to mesenchymal transition and proliferation
Seung Tae Baek, Michelle D. Tallquist
SJR Q1DevelopmentOA

The epicardium is the primary source of coronary vascular smooth muscle cells (cVSMCs) and fibroblasts that reside in the compact myocardium. To form these epicardial-derived cells (EPDCs), the epicardium undergoes the process of epithelial to mesenchymal transition (EMT). Although several signaling pathways have been identified that disrupt EMT, no pathway has been reported that restricts this developmental process. Here, we identify neurofibromin 1 (Nf1) as a key mediator of epicardial EMT. To

Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
Review|34 citations·2013
Hemimegalencephaly, a paradigm for somatic postzygotic neurodevelopmental disorders
Seung Tae Baek, Elizabeth M. Gibbs, Joseph G. Gleeson, Gary W. Mathern
SJR Q1Current Opinion in Neurology

PURPOSE OF REVIEW: Combining human genomics and molecular biology, recent studies have made pivotal progress toward understanding the cause of hemimegalencephaly (HME) and other cerebral megalencephaly syndromes. The present article highlights recent advances of the genetic cause of these conditions, and considers the role of somatic postzygotic genetic lesions in brain maldevelopment. RECENT FINDINGS: Studies over the past 12 months have identified de-novo somatic mutations as one possible caus

Psychiatry and Mental healthMedicine
11
Article|28 citations·2019
Downregulation of Human DAB2IP Gene Expression in Renal Cell Carcinoma Results in Resistance to Ionizing Radiation
Eun-Jin Yun, Chun-Jung Lin, Andrew Dang, Elizabeth Hernandez, Jiaming Guo, Wei‐Min Chen, Joyce Allison, Nathan Kim, Payal Kapur, James Brugarolas, Kaijie Wu, Dalin He
SJR Q1Clinical Cancer ResearchOA

Abstract Purpose: Renal cell carcinoma (RCC) is known to be highly radioresistant but the mechanisms associated with radioresistance have remained elusive. We found DOC-2/DAB2 interactive protein (DAB2IP) frequently downregulated in RCC, is associated with radioresistance. In this study, we investigated the underlying mechanism regulating radioresistance by DAB2IP and developed appropriate treatment. Experimental Design: Several RCC lines with or without DAB2IP expression were irradiated with io

OncologyMedicine
12
Article|8 citations·2008
Genome-wide drug-induced haploinsufficient screening of fission yeast for identification of hydrazinocurcumin targets.
Seung Tae Baek, Dong Uk Kim, Sangjo Han, Im Sun Woo, Miyoung Nam, Lila Kim, Kyung‐Sun Heo, Hyemi Lee, Hye Rim Hwang, Shin Jung Choi, Misun Won, Minho Lee
PubMed

Hydrazinocurcumin (HC), a synthetic derivative of curcumin, has been reported to inhibit angiogenesis via unknown mechanisms. Understanding the molecular mechanisms of the drug's action is important for the development of improved compounds with better pharmacological properties. A genomewide drug-induced haploinsufficiency screening of fission yeast gene deletion mutants has been applied to identify drug targets of HC. As a first step, the 50% inhibition concentration (IC50) of HC was determine

Biomedical EngineeringEngineering
13
Article|8 citations·2023
Reversibility and developmental neuropathology of linear nevus sebaceous syndrome caused by dysregulation of the RAS pathway
Ye Eun Kim, Yong-Seok Kim, Hee-Eun Lee, Ki Hurn So, Youngshik Choe, Byung‐Chang Suh, Joung‐Hun Kim, Sang Ki Park, Gary W. Mathern, Joseph G. Gleeson, Jong‐Cheol Rah, Seung Tae Baek
SJR Q1Cell ReportsOA

Linear nevus sebaceous syndrome (LNSS) is a neurocutaneous disorder caused by somatic gain-of-function mutations in KRAS or HRAS . LNSS brains have neurodevelopmental defects, including cerebral defects and epilepsy; however, its pathological mechanism and potentials for treatment are largely unclear. We show that introduction of KRAS G12V in the developing mouse cortex results in subcortical nodular heterotopia and enhanced excitability, recapitulating major pathological manifestations of LNSS.

GeneticsBiochemistry, Genetics and Molecular Biology
14
Article|4 citations·2008
Genome-wide identification of haploinsufficiency in fission yeast.
Seung Tae Baek, Sangjo Han, Miyoung Nam, Young Dae Kim, Lila Kim, Hyun Jee Lee, Kyung‐Sun Heo, Hye‐Mi Lee, Minho Lee, Song Kyu Park, Pil Jae Maeng, Young‐Woo Park
PubMed

Abnormal phenotypes resulting from haploinsufficiency (HI) are due to the loss of one allele. Recent studies in budding yeast have shown that HI originates from insufficient protein levels or from a stoichiometric imbalance between subunits of protein complexes. In humans, however, HI often involves transcription factors. Therefore, the species differences in HI and the molecular mechanisms of species-specific HI remain under investigation. In this study, HI in fission yeast was systematically s

Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Article|2 citations·2022
Reversibility and Developmental Neuropathology of Linear Nevus Sebaceous Syndrome Caused by Dysregulation of the RAS Pathway
Ye Eun Kim, Yong-Seok Kim, Hee-Eun Lee, Ki Hurn So, Youngshik Choe, Byung‐Chang Suh, Joung‐Hun Kim, Sang Ki Park, Gary W. Mathern, Joseph G. Gleeson, Jong‐Cheol Rah, Seung Tae Baek
SSRN Electronic JournalOA
GeneticsBiochemistry, Genetics and Molecular Biology

Research Areas

Molecular BiologyGeneticsOncologyCell BiologyPublic Health, Environmental and Occupational HealthPulmonary and Respiratory Medicine

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