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Sungwoo Park

Pohang University of Science and Technology · Physics and Astronomy

About the Lab

Professor Sungwoo Park's research lab specializes in computational and theoretical chemistry, with a strong focus on protein folding mechanisms and enzyme catalysis, particularly involving protein disulfide isomerases and their roles in cellular protein homeostasis. The lab also advances computational methods in materials science and machine learning, including the development of novel generative models such as Sphere GAN for stable and accurate image generation. Additionally, the lab contributes to the design of probabilistic programming languages and parallel computing algorithms, emphasizing expressive power and efficiency in high-performance computing environments. These interdisciplinary efforts bridge biochemistry, computational chemistry, and computer science to solve complex problems in molecular systems and data-intensive computing.

protein foldinggenerative adversarial networksprobabilistic programmingparallel computingcomputational chemistry

Research Overview

Papers
333
Total Citations
4,053
Papers (5y)
56
Primary Field
Physics and Astronomy

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
56total
2021
2022
2023
2024
2025
Citations per year (5y)
174total
20212022202320242025

Selected Papers

15
1
Article|427 citations·2009
The protein disulfide isomerase AGR2 is essential for production of intestinal mucus
Sungwoo Park, Guohua Zhen, Catherine Verhaeghe, Yasuhiro Nakagami, Louis T. Nguyenvu, Andrea J. Barczak, Nigel Killeen, David J. Erle
SJR Q1Proceedings of the National Academy of SciencesOA

Protein disulfide isomerases (PDIs) aid protein folding and assembly by catalyzing formation and shuffling of cysteine disulfide bonds in the endoplasmic reticulum (ER). Many members of the PDI family are expressed in mammals, but the roles of specific PDIs in vivo are poorly understood. A recent homology-based search for additional PDI family members identified anterior gradient homolog 2 (AGR2), a protein originally presumed to be secreted by intestinal epithelial cells. Here, we show that AGR

Cell BiologyBiochemistry, Genetics and Molecular Biology
2
Article|145 citations·2015
Complete Switch of Selectivity in the C–H Alkenylation and Hydroarylation Catalyzed by Iridium: The Role of Directing Groups
Jiyu Kim, Sungwoo Park, Mu‐Hyun Baik, Sukbok Chang
SJR Q1Journal of the American Chemical Society

A complete switch in the Cp*Ir(III)-catalyzed paths between C-H olefination and hydroarylation was found to be crucially dependent on the type of directing groups. This dichotomy in product distribution was correlated to the efficiency in attaining syn-coplanarity of olefin-inserted 7-membered iridacycles. Theoretical studies support our hypothesis that the degree of flexibility of this key intermediate modulates the β-H elimination, which ultimately affords the observed chemoselectivity.

Organic ChemistryChemistry
3
Article|83 citations·2009
Effects of water temperature change on immune function in surf clams, Mactra veneriformis (Bivalvia: Mactridae)
Jin-Ha Yu, Jae Hee Song, Min Chul Choi, Sungwoo Park
SJR Q1Journal of Invertebrate Pathology
Global and Planetary ChangeEnvironmental Science
4
Article|68 citations·2009
Parallel Skyline Computation on Multicore Architectures
Sungwoo Park, Tae-Kyung Kim, Jong‐Hyun Park, Jinha Kim, Hyeonseung Im
Proceedings - International Conference on Data Engineering

With the advent of multicore processors,it has become imperative to write parallel programs if one wishes to exploit the next generation of processors. This paper deals with skyline computation as a case study of parallelizing database operations on multicore architectures. We compare two parallel skyline algorithms: a parallel version of the branch-and-bound algorithm (BBS) and a new parallel algorithm based on skeletal parallel programming. Experimental results show despite its simple design,

Signal ProcessingComputer Science
5
Article|58 citations·2003
Dynamic paths between neutral alanine–water and zwitterionic alanine–water clusters: single, double and triple proton transfer
Sungwoo Park, Doo‐Sik Ahn, Sungyul Lee
SJR Q2Chemical Physics Letters
Atomic and Molecular Physics, and OpticsPhysics and Astronomy
6
Article|57 citations·2011
Group skyline computation
Hyeonseung Im, Sungwoo Park
SJR Q1Information Sciences
Signal ProcessingComputer Science
7
Article|49 citations·2008
A probabilistic language based on sampling functions
Sungwoo Park, Frank Pfenning, Sebastian Thrun
SJR Q2ACM Transactions on Programming Languages and SystemsOA

As probabilistic computations play an increasing role in solving various problems, researchers have designed probabilistic languages which treat probability distributions as primitive datatypes. Most probabilistic languages, however, focus only on discrete distributions and have limited expressive power. This article presents a probabilistic language, called λ ○ , whose expressive power is beyond discrete distributions. Rich expressiveness of λ ○ is due to its use of sampling functions , that is

Signal ProcessingComputer Science
8
Article|42 citations·2019
Sphere Generative Adversarial Network Based on Geometric Moment Matching
Sungwoo Park, Junseok Kwon

We propose sphere generative adversarial network (GAN), a novel integral probability metric (IPM)-based GAN. Sphere GAN uses the hypersphere to bound IPMs in the objective function. Thus, it can be trained stably. On the hypersphere, sphere GAN exploits the information of higher-order statistics of data using geometric moment matching, thereby providing more accurate results. In the paper, we mathematically prove the good properties of sphere GAN. In experiments, sphere GAN quantitatively and qu

Computer Vision and Pattern RecognitionComputer Science
9
Article|31 citations·2011
Parallel skyline computation on multicore architectures
Hyeonseung Im, Jong‐Hyun Park, Sungwoo Park
SJR Q1Information Systems
Signal ProcessingComputer Science
10
Article|28 citations·2006
Structure and stability of glycine–(H2O)3 cluster and anion: Zwitterion vs. canonical glycine
Sungwoo Park, Suk Im, Sungyul Lee, C. Desfrançois
SJR Q3International Journal of Quantum Chemistry

Abstract Calculations are presented for the glycine–(H 2 O) cluster anion, with glycine in canonical or zwitterionic form. The zwitterionic anions are predicted to be considerably lower in energy than the canonical anions, and the latter forms are found to be prone to isomerization to the zwitterionic anions. Therefore, we predict that the zwitterionic anions would be observed predominantly in the gas phase at low temperature. In contrast, calculated stability of neutral glycine–(H 2 O) 3 cluste

Physical and Theoretical ChemistryChemistry
11
Article|26 citations·2011
Moving average correction method for compensation of differential column shortenings in high‐rise buildings
Sungwoo Park, Se Woon Choi, Hyo Seon Park
SJR Q1The Structural Design of Tall and Special Buildings

SUMMARY The differential length changes of vertical members in a high‐rise building due to elastic, creep and shrinkage shortenings are of primary concern since the differential shortening of the vertical members causes unexpected damages on structural and nonstructural members. In contrast to researches on prediction methods for calculation of the amount of the shortenings, only few methods or algorithms of compensation of the differential column shortenings have been reported. In this paper, a

Statistics, Probability and UncertaintyDecision Sciences
12
Article|23 citations·2012
Design of Carbene-Based Organocatalysts for Nitrogen Fixation: Theoretical Study
Sungwoo Park, Young Nam Chun, Seung Joo Cho, Sungyul Lee, Kwang S. Kim
SJR Q1Journal of Chemical Theory and Computation

Nitrogen fixation is a great challenge in solving the food supply of mankind. However N2 activation is extremely hard. Up until recently, the investigated catalysts for N2 fixation were based on metallic reducing agents. They are generally not environment friendly. We designed organocatalysts (carbenes) for nitrogen fixation using density functional theory (DFT) and ab initio theory. The reactivity of the carbene catalysts is mainly related to the electrostatic properties of the side chains. We

CatalysisChemical Engineering
13
Article|21 citations·2020
SphereGAN: Sphere Generative Adversarial Network Based on Geometric Moment Matching and its Applications
Sungwoo Park, Junseok Kwon
SJR Q1IEEE Transactions on Pattern Analysis and Machine Intelligence

We propose a novel integral probability metric-based generative adversarial network (GAN), called SphereGAN. In the proposed scheme, the distance between two probability distributions (i.e., true and fake distributions) is measured on a hypersphere. Given that its hypersphere-based objective function computes the upper bound of the distance as a half arc, SphereGAN can be stably trained and can achieve a high convergence rate. In sphereGAN, higher-order information of data is processed using mul

Computer Vision and Pattern RecognitionComputer Science
14
Article|18 citations·2016
Repeat Double-Opposing Z-Plasty for the Management of Persistent Velopharyngeal Insufficiency
Sungwoo Park, Tae Suk Oh, Kyung S. Koh
SJR Q2Annals of Plastic Surgery

Repeat double-opposing Z-plasty is an effective and safe surgical strategy for the management of persistent velopharyngeal insufficiency, in patients who received a prior surgical intervention by double-opposing Z-plasty. This strategy allows speech improvement and reduces the risk of postoperative upper airway compromise.

GeneticsBiochemistry, Genetics and Molecular Biology
15
Article|16 citations·2015
Topical EMLA Cream as a Pretreatment for Facial Lacerations
Sungwoo Park, Tae Suk Oh, Jong Woo Choi, Jin Sup Eom, Joon Pio Hong, Kyung S. Koh, Taik Jong Lee, Eun Key Kim
SJR Q2Archives of Plastic SurgeryOA

BACKGROUND: Topical anesthetics, such as eutectic mixture of local anesthetics (EMLA) cream, can be applied to reduce pain before minor procedure. This trial evaluated EMLA as pretreatment for facial lacerations and compared pain, discomfort and overall satisfaction. METHODS: This trial included consecutive emergency department patients ≥16 years of age who presented with simple facial lacerations. At triage, lacerations were allotted to either the routine processing group or EMLA pretreatment g

SurgeryMedicine

Research Areas

Nuclear and High Energy PhysicsMaterials ChemistryArtificial IntelligenceOrganic ChemistryCivil and Structural EngineeringSurgery

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