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Tae‐Wuk Kim

Hanyang University · Agricultural and Biological Sciences

About the Lab

Professor Tae-Wook Kim's research lab focuses on plant hormone signaling, particularly brassinosteroid (BR) biosynthesis, perception, and signal transduction. The lab investigates key enzymes and regulatory proteins involved in BR metabolism, such as CYP85A2 and DWF1, and employs advanced techniques like TurboID-based proximity labeling to map dynamic posttranslational modification networks. Their work elucidates molecular mechanisms underlying BR-regulated development, including root growth, gravitropism, and transcription factor degradation, with a strong emphasis on kinase-phosphatase crosstalk and substrate identification in signaling pathways.

brassinosteroidssignal transductionposttranslational modificationcytochrome P450kinase networks

Research Overview

Papers
78
Total Citations
7,591
Papers (5y)
13
Primary Field
Agricultural and Biological Sciences

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
13total
2021
2022
2023
2024
2025
Citations per year (5y)
310total
20212022202320242025

Selected Papers

15
1
Article|697 citations·2009
Brassinosteroid signal transduction from cell-surface receptor kinases to nuclear transcription factors
Tae‐Wuk Kim, Shenheng Guan, Yu Sun, Zhiping Deng, Wenqiang Tang, Jian‐Xiu Shang, Ying Sun, Alma L. Burlingame, Zhiyong Wang
SJR Q1Nature Cell BiologyOA
Plant ScienceAgricultural and Biological Sciences
2
Review|649 citations·2010
Brassinosteroid Signal Transduction from Receptor Kinases to Transcription Factors
Tae‐Wuk Kim, Zhiyong Wang
SJR Q1Annual Review of Plant Biology

Brassinosteroids (BRs) are growth-promoting steroid hormones in plants. Genetic studies in Arabidopsis illustrated the essential roles of BRs in a wide range of developmental processes and helped identify many genes involved in BR biosynthesis and signal transduction. Recently, proteomic studies identified missing links. Together, these approaches established the BR signal transduction cascade, which includes BR perception by the BRI1 receptor kinase at the cell surface, activation of BRI1/BAK1

Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
Article|531 citations·2012
Brassinosteroid regulates stomatal development by GSK3-mediated inhibition of a MAPK pathway
Tae‐Wuk Kim, Marta Michniewicz, Dominique C. Bergmann, Zhiyong Wang
SJR Q1Nature
Plant ScienceAgricultural and Biological Sciences
4
Article|398 citations·2011
The CDG1 Kinase Mediates Brassinosteroid Signal Transduction from BRI1 Receptor Kinase to BSU1 Phosphatase and GSK3-like Kinase BIN2
Tae‐Wuk Kim, Shenheng Guan, Alma L. Burlingame, Zhiyong Wang
SJR Q1Molecular CellOA
Plant ScienceAgricultural and Biological Sciences
5
Article|260 citations·2005
Arabidopsis CYP85A2, a Cytochrome P450, Mediates the Baeyer-Villiger Oxidation of Castasterone to Brassinolide in Brassinosteroid Biosynthesis
Tae‐Wuk Kim, Jung-Yun Hwang, Young‐Soo Kim, Se‐Hwan Joo, Soo Chul Chang, June Seung Lee, Suguru Takatsuto, Seong‐Ki Kim
SJR Q1The Plant CellOA

The conversion of castasterone (CS) to brassinolide (BL), a Baeyer-Villiger oxidation, represents the final and rate-limiting step in the biosynthesis of BL in plants. Heterologously expressed Arabidopsis thaliana CYP85A2 in yeast mediated the conversion of CS to BL as well as the C-6 oxidation of brassinosteroids (BRs). This indicated that CYP85A2 is a bifunctional enzyme that possesses BR C-6 oxidase and BL synthase activity. CYP85A2 is thus a cytochrome P450 that mediates Baeyer-Villiger oxid

Plant ScienceAgricultural and Biological Sciences
6
Article|102 citations·2007
Elongation and gravitropic responses of Arabidopsis roots are regulated by brassinolide and IAA
Tae‐Wuk Kim, Sun Min Lee, Se‐Hwan Joo, Hye Sup Yun, Yew Lee, Peter B. Kaufman, Ara Kirakosyan, Soo-Hwan Kim, Soo-Hwan Kim, Kyoung Hee Nam, June Seung Lee, Soo Chul Chang
SJR Q1Plant Cell & EnvironmentOA

Exogenously applied brassinolide (BL) increased both gravitropic curvature and length of primary roots of Arabidopsis at low concentration (10(-10) M), whereas at higher concentration, BL further increased gravitropic curvature while it inhibited primary root growth. BRI1-GFP plants possessing a high steady-state expression level of a brassinosteroid (BR) receptor kinase rendered the plant's responses to gravity and root growth more sensitive, while BR-insensitive mutants, bri1-301 and bak1, del

Plant ScienceAgricultural and Biological Sciences
7
Article|94 citations·2023
Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics
Tae‐Wuk Kim, Chan Ho Park, Chuan‐Chih Hsu, Yeong-Woo Kim, Yeong‐Woo Ko, Zhenzhen Zhang, Jia‐Ying Zhu, Yu‐Chun Hsiao, Tess C. Branon, Krista Kaasik, Evan Saldivar, Kevin Li
SJR Q1The Plant CellOA

Elucidating enzyme-substrate relationships in posttranslational modification (PTM) networks is crucial for understanding signal transduction pathways but is technically difficult because enzyme-substrate interactions tend to be transient. Here, we demonstrate that TurboID-based proximity labeling (TbPL) effectively and specifically captures the substrates of kinases and phosphatases. TbPL-mass spectrometry (TbPL-MS) identified over 400 proximal proteins of Arabidopsis thaliana BRASSINOSTEROID-IN

Cell BiologyBiochemistry, Genetics and Molecular Biology
8
Article|88 citations·2019
Plant U-Box40 Mediates Degradation of the Brassinosteroid-Responsive Transcription Factor BZR1 in Arabidopsis Roots
Eun‐Ji Kim, Se‐Hwa Lee, Chan Ho Park, Sohee Kim, Chuan‐Chih Hsu, Shou‐Ling Xu, Zhiyong Wang, Seong‐Ki Kim, Tae‐Wuk Kim
SJR Q1The Plant CellOA

BRASSINOSTEROID-INSENSITIVE2-induced phosphorylation of PUB40, which mainly occurs in roots, gives rise to BZR1 degradation through enhanced binding of PUB40 to BZR1 and PUB40's stability. Our results suggest a molecular mechanism of root-specific BZR1 degradation regulated by BR signaling.

Plant ScienceAgricultural and Biological Sciences
9
Article|68 citations·2018
Function and molecular regulation of DWARF1 as a C-24 reductase in brassinosteroid biosynthesis in Arabidopsis
Ji‐Hyun Youn, Seong‐Ki Kim, Se‐Hwan Joo, SeungHyun Son, Jeehee Roh, Sun-Young Kim, Tae‐Wuk Kim, Seong‐Ki Kim
SJR Q1Journal of Experimental BotanyOA

DWARF1 (DWF1) is a sterol C-24 reductase that catalyses the conversion of 24-methylenecholesterol (24-MCHR) to campesterol (CR) in Arabidopsis. A loss-of-function mutant, dwf1, showed similar phenotypic abnormalities to brassinosteroid (BR)-deficient mutants. These abnormalities were reversed in the wild-type phenotype by exogenous application of castasterone (CS) and brassinolide (BL), but not dolichosterone (DS). Accumulation of DS and decreased CS were found in quantitative analysis of endoge

Plant ScienceAgricultural and Biological Sciences
10
Article|62 citations·2022
Brassinosteroids enhance salicylic acid-mediated immune responses by inhibiting BIN2 phosphorylation of clade I TGA transcription factors in Arabidopsis
Yeong-Woo Kim, Ji‐Hyun Youn, Jeehee Roh, Jeong‐Mok Kim, Seong‐Ki Kim, Tae‐Wuk Kim
SJR Q1Molecular PlantOA
Plant ScienceAgricultural and Biological Sciences
11
Article|52 citations·2004
Novel Biosynthetic Pathway of Castasterone from Cholesterol in Tomato
Tae‐Wuk Kim, Soo Chul Chang, June Seung Lee, Suguru Takatsuto, Takao Yokota, Seong‐Ki Kim
SJR Q1PLANT PHYSIOLOGYOA

Endogenous brassinosteroids (BRs) in tomato (Lycopersicon esculentum) seedlings are known to be composed of C27- and C28-BRs. The biosynthetic pathways of C27-BRs were examined using a cell-free enzyme solution prepared from tomato seedlings that yielded the biosynthetic sequences cholesterol --> cholestanol and 6-deoxo-28-norteasterone <--> 6-deoxo-28-nor-3-dehydroteasterone <--> 6-deoxo-28-nortyphasterol --> 6-deoxo-28-norcastasterone --> 28-norcastasterone (28-norCS). Arabidopsis CYP85A1 that

Molecular BiologyBiochemistry, Genetics and Molecular Biology
12
Preprint|38 citations·2019
Application of TurboID-mediated proximity labeling for mapping a GSK3 kinase signaling network in Arabidopsis
Tae‐Wuk Kim, Chan Ho Park, Chuan‐Chih Hsu, Jia‐Ying Zhu, Yu‐Chun Hsiao, Tess C. Branon, Shou‐Ling Xu, Alice Y. Ting, Zhiyong Wang
bioRxiv (Cold Spring Harbor Laboratory)

Abstract Transient protein-protein interactions (PPIs), such as those between posttranslational modifying enzymes and their substrates, play key roles in cellular regulation, but are difficult to identify. Here we demonstrate the application of enzyme-catalyzed proximity labeling (PL), using the engineered promiscuous biotin ligase TurboID, as a sensitive method for characterizing PPIs in signaling networks. We show that TurboID fused with the GSK3-like kinase BIN2 or a PP2A phosphatase biotinyl

Cell BiologyBiochemistry, Genetics and Molecular Biology
13
Article|37 citations·2024
Transcription factors BZR1 and PAP1 cooperate to promote anthocyanin biosynthesis in Arabidopsis shoots
Se‐Hwa Lee, Sohee Kim, Tae‐Ki Park, Young‐Pil Kim, Jin‐Won Lee, Tae‐Wuk Kim
SJR Q1The Plant CellOA

Anthocyanins play critical roles in protecting plant tissues against diverse stresses. The complicated regulatory networks induced by various environmental factors modulate the homeostatic level of anthocyanins. Here, we show that anthocyanin accumulation is induced by brassinosteroids (BRs) in Arabidopsis (Arabidopsis thaliana) shoots and shed light on the underlying regulatory mechanism. We observed that anthocyanin levels are altered considerably in BR-related mutants, and BRs induce anthocya

Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Article|36 citations·2004
Cytochrome P450-catalyzed brassinosteroid pathway activation through synthesis of castasterone and brassinolide in Phaseolus vulgaris
Tae‐Wuk Kim, Soo Chul Chang, June Seung Lee, Baik Hwang, Suguru Takatsuto, Takao Yokota, Seong‐Ki Kim
SJR Q1Phytochemistry
Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Article|34 citations·2023
Comparative analysis of BZR1/BES1 family transcription factors in Arabidopsis
Sohee Kim, Se‐Hwa Lee, Tae‐Ki Park, Yanchen Tian, K. Yu, Byeong‐ha Lee, Ming‐Yi Bai, Sung–Jin Cho, Tae‐Wuk Kim
SJR Q1The Plant JournalOA

Brassinazole Resistant 1 (BZR1) and bri1 EMS Suppressor 1 (BES1) are key transcription factors that mediate brassinosteroid (BR)-responsive gene expression in Arabidopsis. The BZR1/BES1 family is composed of BZR1, BES1, and four BES1/BZR1 homologs (BEH1-BEH4). However, little is known about whether BEHs are regulated by BR signaling in the same way as BZR1 and BES1. We comparatively analyzed the functional characteristics of six BZR1/BES1 family members and their regulatory mechanisms in BR sign

Plant ScienceAgricultural and Biological Sciences

Research Areas

Plant ScienceMolecular BiologyCell BiologyPathology and Forensic MedicineElectrical and Electronic EngineeringGlobal and Planetary Change

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