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Yoo-Mi Yang

Yonsei University · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Yoo-Mi Yang's research lab specializes in cellular signaling mechanisms underlying bone and mineral metabolism, with a focus on calcium signaling, reactive oxygen species (ROS), and transient receptor potential (TRP) channels in osteoclastogenesis and osteoblast function. The lab investigates how mechanical, osmotic, and thermal stimuli regulate intracellular Ca²⁺ dynamics and downstream transcriptional activation via NFATc1, particularly in bone cells and odontoblasts. A key research direction involves the role of lysosomal Ca²⁺ signaling through TRPML1 in bone homeostasis and osteoclast differentiation. The lab also explores ion transport and fluid secretion in airway epithelia, linking TRP channels and calcium signaling to inflammatory airway diseases.

calcium signalingosteoclastogenesisTRP channelsbone homeostasislysosomal Ca2+

Research Overview

Papers
38
Total Citations
750
Papers (5y)
7
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
7total
2021
2022
2023
2024
2025
Citations per year (5y)
18total
20212022202320242025

Selected Papers

15
1
Article|205 citations·2010
RANKL-mediated Reactive Oxygen Species Pathway That Induces Long Lasting Ca2+ Oscillations Essential for Osteoclastogenesis
Min Seuk Kim, Yu‐Mi Yang, Aran Son, Yu Tian, Syng-Ill Lee, Sang Won Kang, Shmuel Muallem, Dong Min Shin
SJR Q1Journal of Biological ChemistryOA

RANKL (receptor activator of NF-kappaB ligand) induces osteoclastogenesis by activating multiple signaling pathways in osteoclast precursor cells, chief among which is induction of long lasting oscillations in the intracellular concentration of Ca(2+) ([Ca(2+)](i)). The [Ca(2+)](i) oscillations activate calcineurin, which activates the transcription factor NFATc1. The pathway by which RANKL induces [Ca(2+)](i) oscillations and osteoclastogenesis is poorly understood. Here we report the discovery

Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|99 citations·2009
Odontoblast TRP Channels and Thermo/Mechanical Transmission
Aran Son, Yu‐Mi Yang, Jung‐Hoon Hong, S.I. Lee, Yukinao Shibukawa, Dong Min Shin
SJR Q1Journal of Dental ResearchOA

Odontoblasts function as mechanosensory receptors because of the expression of mechanosensitive channels in these cells. However, it is unclear if odontoblasts direct the signal transmission evoked by heat/cold or osmotic changes. This study investigated the effects of heat/cold or osmotic changes on calcium signaling and the functional expression of the thermo/mechanosensitive transient receptor potential (TRP) channels in primary cultured mouse odontoblastic cells, with the use of RT-PCR, fluo

Sensory SystemsNeuroscience
3
Review|98 citations·2020
The Role of Ca2+-NFATc1 Signaling and Its Modulation on Osteoclastogenesis
Jung Yun Kang, Namju Kang, Yu‐Mi Yang, Jeong Hee Hong, Dong Min Shin
SJR Q1International Journal of Molecular SciencesOA

The increasing of intracellular calcium concentration is a fundamental process for mediating osteoclastogenesis, which is involved in osteoclastic bone resorption. Cytosolic calcium binds to calmodulin and subsequently activates calcineurin, leading to NFATc1 activation, a master transcription factor required for osteoclast differentiation. Targeting the various activation processes in osteoclastogenesis provides various therapeutic strategies for bone loss. Diverse compounds that modulate calci

Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Article|46 citations·2016
Lysosomal Ca2+ Signaling is Essential for Osteoclastogenesis and Bone Remodeling
Munkhsoyol Erkhembaatar, Dong Ryun Gu, Seoung Hoon Lee, Yu‐Mi Yang, Soonhong Park, Shmuel Muallem, Dong Min Shin, Min Seuk Kim
SJR Q1Journal of Bone and Mineral ResearchOA

ABSTRACT Lysosomal Ca2+ emerges as a critical component of receptor-evoked Ca2+ signaling and plays a crucial role in many lysosomal and physiological functions. Lysosomal Ca2+ release is mediated by the transient receptor potential (TRP) family member TRPML1, mutations that cause the lysosomal storage disease mucolipidosis type 4. Lysosomes play a key role in osteoclast function. However, nothing is known about the role of lysosomal Ca2+ signaling in osteoclastogenesis and bone metabolism. In t

PhysiologyBiochemistry, Genetics and Molecular Biology
5
Article|38 citations·2018
TRPM3/TRPV4 regulates Ca2+-mediated RANKL/NFATc1 expression in osteoblasts
Aran Son, Namju Kang, Jung Yun Kang, Ki Woo Kim, Yu‐Mi Yang, Dong Min Shin
SJR Q1Journal of Molecular EndocrinologyOA

Mechanical stress plays an important role in the regulation of bone turnover. However, the mechanism underlying hypo-osmotic stress-induced cellular response in osteoblasts remains poorly understood. In this study, we investigated the effect of hypotonic stress on the expression of bone remodeling factors, including the receptor activator of nuclear factor-kappa B ligand (RANKL) and the nuclear factor of activated T cells type c1 (NFATc1) in primary mouse osteoblasts and MC3T3-E1 cells. Hypo-osm

Sensory SystemsNeuroscience
6
Article|34 citations·2010
House dust mite extract activates apical Cl− channels through protease‐activated receptor 2 in human airway epithelia
Hyung‐Ju Cho, Jae Young Choi, Yu‐Mi Yang, Jeong Hee Hong, Chang‐Hoon Kim, Heon Yung Gee, Hyun Jae Lee, Dong Min Shin, Joo‐Heon Yoon
SJR Q2Journal of Cellular BiochemistryOA

Adequate fluid secretion from airway mucosa is essential for maintaining mucociliary clearance, and fluid hypersecretion is a prominent feature of inflammatory airway diseases such as allergic rhinitis. House dust mite extract (HDM) has been reported to activate protease-activated receptors (PARs), which play various roles in airway epithelia. However, the role of HDM in regulating ion transporters and fluid secretion has not been investigated. We examined the effect of HDM on ion transport in h

HematologyMedicine
7
Article|29 citations·2015
Hypotonic Stress Induces RANKL via Transient Receptor Potential Melastatin 3 (TRPM3) and Vaniloid 4 (TRPV4) in Human PDL Cells
Ga Yeon Son, Yu‐Mi Yang, Wonse Park, Injoong Chang, Dong Min Shin
SJR Q1Journal of Dental ResearchOA

Bone remodeling occurs in response to various types of mechanical stress. The periodontal ligament (PDL) plays an important role in mechanical stress-mediated alveolar bone remodeling. However, the underlying mechanism at the cellular level has not been extensively studied. In this study, we investigated the effect of shear stress on the expression of bone remodeling factors, including receptor activator of nuclear factor-kappa B (NF-κB) ligand (RANKL) and osteoprotegerin (OPG), as well as its u

Sensory SystemsNeuroscience
8
Article|26 citations·2014
Homer2 Protein Regulates Plasma Membrane Ca2+-ATPase-mediated Ca2+ Signaling in Mouse Parotid Gland Acinar Cells
Yu‐Mi Yang, Jun‐Ho Lee, Hae Jo, Soonhong Park, Inik Chang, Shmuel Muallem, Dong Min Shin
SJR Q1Journal of Biological ChemistryOA

Homer proteins are scaffold molecules with a domain structure consisting of an N-terminal Ena/VASP homology 1 protein-binding domain and a C-terminal leucine zipper/coiled-coil domain. The Ena/VASP homology 1 domain recognizes proline-rich motifs and binds multiple Ca(2+)-signaling proteins, including G protein-coupled receptors, inositol 1,4,5-triphosphate receptors, ryanodine receptors, and transient receptor potential channels. However, their role in Ca(2+) signaling in nonexcitable cells is

Molecular BiologyBiochemistry, Genetics and Molecular Biology
9
Article|23 citations·2016
A Novel Human PTH Analog [Cys25]hPTH(1–34) Restores Bone Mass in Ovariectomized Mice
Chu Hyun Bae, Myeongmo Kang, Clara Yongjoo Park, Bo Mi Park, Dongdong Zhang, Hee Jin Nam, Yu‐Mi Yang, Dong Min Shin, Je‐Yong Choi, Sung-Kil Lim
SJR Q1The Journal of Clinical Endocrinology & MetabolismOA

CONTEXT: Recently, an arginine-to-cysteine homozygous mutation at position 25 in mature PTH was reported in a Korean patient with hypoparathyroidism. OBJECTIVE: To clarify whether the high bone mass phenotype observed in this patient was related to the hypoparathyroidism itself or to chronic elevation of mutant PTH. METHODS: hPTH(1-34). The peptides were then sc delivered to ovariectomized mice as daily single injections. RESULTS: hPTH(1-34) increased the bone formation rate in both trabecular a

NephrologyMedicine
10
Article|21 citations·2019
Homer2 and Homer3 modulate RANKL-induced NFATc1 signaling in osteoclastogenesis and bone metabolism
Aran Son, Namju Kang, Sue Young Oh, Ki Woo Kim, Shmuel Muallem, Yu‐Mi Yang, Dong Min Shin
SJR Q1Journal of EndocrinologyOA

The receptor activator of nuclear factor-kappa B ligand (RANKL) induces osteoclastogenesis by induction of Ca2+ oscillation, calcineurin activation and translocation into the nucleus of nuclear factor of activated T cells type c1 (NFATc1). Homer proteins are scaffold proteins. They regulate Ca2+ signaling by modulating the activity of multiple Ca2+ signaling proteins. Homers 2 and 3, but not Homer1, also independently affect the interaction between NFATc1 and calcineurin. However, to date, wheth

Molecular BiologyBiochemistry, Genetics and Molecular Biology
11
Article|17 citations·2013
TRPM7 Is Essential for RANKL-Induced Osteoclastogenesis
Yu‐Mi Yang, Hwi-Hoon Jung, Sung Jun Lee, Hyung-Jun Choi, Min Seuk Kim, Dong Min Shin
SJR Q3Korean Journal of Physiology and PharmacologyOA

The transient receptor potential melastatin type 7 (TRPM7) channel is a widely expressed non-selective cation channel with fusion to the C-terminal alpha kinase domain and regarded as a key regulator of whole body Mg(2+) homeostasis in mammals. However, the roles of TRPM7 during osteoclastogenesis in RAW264.7 cells and bone marrow-derived monocyte/macrophage precursor cells (BMMs) are not clear. In the present study, we investigate the roles of TRPM7 in osteoclastogenesis using methods of small

Nutrition and DieteticsNursing
12
Article|15 citations·2021
Sestrin2 Regulates Osteoclastogenesis via the p62-TRAF6 Interaction
Sue Young Oh, Namju Kang, Jung Yun Kang, Ki Woo Kim, Jong Hoon Choi, Yu‐Mi Yang, Dong Min Shin
SJR Q1Frontiers in Cell and Developmental BiologyOA

The receptor activator of nuclear factor-kappa B ligand (RANKL) mediates osteoclast differentiation and functions by inducing Ca 2+ oscillations, activating mitogen-activated protein kinases (MAPKs), and activating nuclear factor of activated T-cells type c1 (NFATc1) via the RANK and tumor necrosis factor (TNF) receptor-associated factor 6 (TRAF6) interaction. Reactive oxygen species (ROS) also plays an important role during osteoclastogenesis and Sestrin2, an antioxidant, maintains cellular hom

OncologyMedicine
13
Article|14 citations·2006
Cellular action of cholecystokinin-8S-mediated excitatory effects in the rat periaqueductal gray
Yu‐Mi Yang, Jun-Mo Chung, Hyewhon Rhim
SJR Q1Life Sciences
Cellular and Molecular NeuroscienceNeuroscience
14
Article|13 citations·2013
TRPM7 Is Essential for RANKL-Induced Osteoclastogenesis
양유미, 정휘훈, 이성준, 최형준, 김민석, 신동민

The transient receptor potential melastatin type 7 (TRPM7) channel is a widely expressed nonselective cation channel with fusion to the C-terminal alpha kinase domain and regarded as a key regulator of whole body Mg2+ homeostasis in mammals. However, the roles of TRPM7 during osteoclastogenesis in RAW264.7 cells and bone marrow-derived monocyte/macrophage precursor cells (BMMs)are not clear. In the present study, we investigate the roles of TRPM7 in osteoclastogenesis using methods of small inte

15
Article|11 citations·2013
Activation of G Proteins by Aluminum Fluoride Enhances RANKL-Mediated Osteoclastogenesis
Boryung Park, Yu‐Mi Yang, Byung-Jai Choi, Min Seuk Kim, Dong Min Shin
SJR Q3Korean Journal of Physiology and PharmacologyOA

Receptor activator of NF-κB ligand (RANKL)-induced osteoclastogenesis is accompanied by intracellular Ca(2+) mobilization in a form of oscillations, which plays essential roles by activating sequentially Ca(2+)/calmodulin-dependent protein kinase, calcineurin and NFATc1, necessary in the osteoclast differentiation. However, it is not known whether Ca(2+) mobilization which is evoked in RANKL-independent way induces to differentiate into osteoclasts. In present study, we investigated Ca(2+) mobil

Molecular BiologyBiochemistry, Genetics and Molecular Biology

Research Areas

Molecular BiologySensory SystemsPhysiologyNephrologyCellular and Molecular NeuroscienceGenetics

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