Tohoku University · Earth and Planetary Sciences
Professor Cheryl Lewis Ames's research lab focuses on the biology, ecology, and evolution of cnidarians, particularly jellyfish and box jellyfish, with a strong emphasis on venom biology, symbiosis, and biodiversity assessment. The lab integrates cutting-edge molecular techniques—such as transcriptomics, proteomics, and environmental DNA sequencing—with fieldwork and advanced imaging to explore unique biological structures like cassiosomes and to resolve taxonomic uncertainties in venomous species. A central theme is understanding the functional and evolutionary significance of specialized stinging cells and their role in predation, defense, and host-symbiont interactions.
Figures are computed from collected data and may differ slightly.
Snorkelers in mangrove forest waters inhabited by the upside-down jellyfish Cassiopea xamachana report discomfort due to a sensation known as stinging water, the cause of which is unknown. Using a combination of histology, microscopy, microfluidics, videography, molecular biology, and mass spectrometry-based proteomics, we describe C. xamachana stinging-cell structures that we term cassiosomes. These structures are released within C. xamachana mucus and are capable of killing prey. Cassiosomes c
Our Alatina alata transcriptome significantly adds to the genomic resources for this emerging cubozoan model. This study provides the first annotated transcriptome from multiple tissues of a cubozoan focusing on both the adult and larvae. Our approach of using multiple body parts and life stages to generate this transcriptome effectively identified a broad range of candidate genes for the further study of coordinated processes associated with venom, vision and sex. This new genomic resource and
Species of the box jellyfish (Cubozoa) genus Alatina are notorious for their sting along the beaches of several localities of the Atlantic and Pacific. These species include Alatina alata on the Caribbean Island of Bonaire (the Netherlands), A. moseri in Hawaii, and A. mordens in Australia. Most cubozoans inhabit coastal waters, but Alatina is unusual in that specimens have also been collected in the open ocean at great depths. Alatina is notable in that populations form monthly aggregations for
Recent advances in molecular sequencing technology and the increased availability of fieldable laboratory equipment have provided researchers with the opportunity to conduct real-time or near real-time gene-based biodiversity assessments of aquatic ecosystems. In this study, we developed a workflow and portable kit for fieldable environmental DNA sequencing (FeDS) and tested its efficacy by characterizing the breadth of jellyfish (Medusozoa) taxa in the coastal waters of the Upper and Lower Flor
Here we describe the new species Chironex yamaguchii (Cnidaria: Cubozoa) from the Ryukyu Archipelago, Japan. This highly venomous cubomedusa, commonly referred to as Habu-kurage in Japan, is the culprit for several fatalities in Japanese waters. The scientific name adopted for this species in the literature is Chiropsalmus quadrigatus, but our taxonomic investigations show that this represents a case of mistaken identity. In fact, Habu-kurage is a close relative of Chironex fleckeri, which is pa
Here we establish a neotype for Alatina alata (Reynaud, 1830) from the Dutch Caribbean island of Bonaire. The species was originally described one hundred and eighty three years ago as Carybdea alata in La Centurie Zoologique-a monograph published by René Primevère Lesson during the age of worldwide scientific exploration. While monitoring monthly reproductive swarms of A. alata medusae in Bonaire, we documented the ecology and sexual reproduction of this cubozoan species. Examination of forty s
The small but distinctive cubomedusa Carybdea sivickisi has been reported from a range of tropical, subtropical, and mild temperate localities in the Pacific. In Japan, it has only definitively been documented in the subtropical region of Okinawa. However, in 1970 Uchida noted that three specimens from Seto, Wakayama, which he had referred to as Tamoya alata in 1929, were really C. sivickisi. The presence of this species as far north as Wakayama was questionable because of the confusion about th
Medusae (aka jellyfish) have multiphasic life cycles and a propensity to adapt to, and proliferate in, a plethora of aquatic habitats, connecting them to a number of ecological and societal issues. Now, in the midst of the genomics era, affordable next-generation sequencing (NGS) platforms coupled with publically available bioinformatics tools present the much-anticipated opportunity to explore medusa taxa as potential model systems. Genome-wide studies of medusae would provide a remarkable oppo
In Japan three freshwater Limnomedusae have been reported: Craspedacusta sowerbii, C. iseana, and Astrohydra japonica. The latter two species, though known only from Japan, have not been reported in ninety and thirty years, respectively. The type material for C. iseana is lost, and the only known specimens of A. japonica have recently been deposited in the National Museum of Natural History, Smithsonian Institution, Washington, D.C. Craspedacusta sowerbii, on the other hand, is a cosmopolitan sp
Cubozoans (box jellyfish) have a reputation as the most venomous animals on the planet. Herein, we provide a review of cubozoan prey capture and digestion informed by the scientific literature. Like all cnidarians, box jellyfish envenomation originates from structures secreted within nematocyte post-Golgi vesicles called nematocysts. When tentacles come in contact with prey or would-be predators, a cocktail of toxins is rapidly deployed from nematocysts via a long spiny tubule that serves to imm
The box jellyfish Chiropsalmus quadrumanus (Chirodropida: Cubozoa: Cnidaria) is common in warm waters. Although it is assumed that external fertilization is a characteristic of Chirodropida, the life history of C. quadrumanus is not yet known since its reproductive behavior has never been described, nor has the polyp has been found in nature. As a result, in the absence of documentation of reproductive behavior, we sought to test the hypothesis of external fertilization through a histological an
In this work, staurozoans of two distinct morphotypes are reported in Kitsunezaki (Ishinomaki City, Miyagi, Japan) in the years following the Great East Japan Earthquake and Tsunami. Staurozoa specimens were collected from Eisenia and Gelidium macroalgal beds at the Kitsunezaki survey site (October 2019–July 2021). Morphological observations indicated that the Kitsunezaki staurozoans represented two species, Haliclystus inabai and Calvadosia nagatensis, but molecular analyses of the genetic mark
White plague disease has significantly affected Caribbean corals over the last two decades. This disease syndrome is characterized by rapid tissue loss leaving behind dead, white coral skeleton. While three types of white plague have been recognized based on how quickly the disease progresses, the pathogens that trigger this disease have not been identified with certainty. Following the Summer 2014 hyperthermal event along the Florida Reef Tract (FRT), we monitored an outbreak of white plage II
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