Kyoto University · Biochemistry, Genetics and Molecular Biology
Professor Motomu Tanaka's research lab specializes in the development and characterization of biomimetic membrane systems, focusing on bacterial outer membranes and native cell membranes. The lab investigates the structural and mechanical properties of lipid and lipopolysaccharide monolayers using advanced techniques such as X-ray reflectivity, interfacial rheology, and fluorescence labeling. A key research direction involves understanding ion-induced membrane reorganization—particularly calcium-mediated transitions in LPS layers—and designing functional supported membrane platforms that preserve protein orientation and function. The lab also explores bioadhesion mechanisms, especially enhancing receptor-ligand interactions in polymer-spacer-supported membranes for biomedical applications.
Figures are computed from collected data and may differ slightly.
Lipopolysaccharide (LPS) monolayers deposited on planar, hydrophobic substrates were used as a defined model of outer membranes of Pseudomonas aeruginosa strain dps 89. To investigate the influence of ions on the (out-of-plane) monolayer structure, we measured specular X-ray reflectivity at high energy (22 keV) to ensure transmission through water. Electron density profiles were reconstructed from the reflectivity curves, and they indicate that the presence of Ca(2+) ions induces a significant c
We establish two methods to deposit native biomembranes (human erythrocyte membranes and sarcoplasmic reticulum membranes) selectively onto biocompatible microtemplates. The first method utilizes UV photolithography to micropattern the regenerated cellulose, while the second uses the "stamping" of protein barriers onto homogeneous cellulose supports. The relatively simple methods established here allow for the position selective spreading of three-dimensional native cells into two-dimensional fi
We report the orientation selective immobilization of human erythrocyte membranes on planar solid supports. The orientation of the immobilized membrane was identified with selective fluorescence labels. When the right-side-out (RSO) ghosts were incubated with planar glass cover slides, no adsorption or rupture of erythrocytes could be observed. To increase the interfacial attraction between cells and the surface, two types of hydrated polymer films were deposited on the glass cover slides; (a) p
We established a bacterial membrane model with monolayers of bacterial lipopolysaccharides (LPS Re and LPS Ra) and quantified their viscoelastic properties by using an interfacial stress rheometer coupled to a Langmuir film balance. LPS Re monolayers exhibited purely viscous behaviour in the absence of calcium ions, while the same monolayers underwent a viscous-to-elastic transition upon compression in the presence of Ca(2+). Our results demonstrated for the first time that LPSs in bacterial out
Here we report a remarkable enhancement in the adhesion strength of transmembrane cell receptors, human platelet integrin, in a new class of supported lipid membranes, which are separated from the solid substrates by linear polymer spacers. The amphiphilic polymer tether consists of linear hydrophilic poly(2-oxazoline) chains of defined length (degree of polymerization n = 104, MW/Mn = 1.30), whose chain termini are functionalized with the tri-functional silane surface coupling group and hydroph
Previously, we developed a novel coughing model that evoked coughs via citric acid microinjection into the larynx of unanesthetized, unrestrained guinea pigs. Here, we compared the effects of capsaicin and citric acid administration into the larynx using this model. Inhalation of capsaicin (30 microM) or citric acid (0.4 M) for 5 min induced cough mimetic responses over a 10-min observation period (mean +/- S.E.M.: 8.85 +/- 1.60 and 10.40 +/- 1.17 coughs, respectively, n = 18). Microinjection of
Mounting evidence indicated that human mesenchymal stem cells (hMSCs) are responsive not only to biochemical but also to physical cues, such as substrate topography and stiffness. To simulate the dynamic structures of extracellular environments of the marrow in vivo, we designed a novel surrogate substrate for marrow derived hMSCs based on physically cross-linked hydrogels whose elasticity can be adopted dynamically by chemical stimuli. Under frequent mechanical stress, hMSCs grown on our hydrog
Abstract The design of soft biocompatible and functional interfaces on solids is a challenging interdisciplinary endeavour with great potentials for scientific and biotechnnological applications. By combining modern concepts of genetic engineering and bio‐organic chemistry, novel classes of recombinant proteins enable the immobilization of functional nano‐machineries on solid surfaces, which can even beat functions of native biological systems. Mimetics of tissues can be fabricated by deposition
The combination of grazing-incidence X-ray scattering experiments and Monte Carlo simulation unravels the physics of bacterial survival against cationic antimicrobial peptides (protamine). As a realistic model of bacterial outer membranes, an insoluble monolayer of lipopolysaccharide from Salmonella enterica sv. Minnesota Ra (LPS Ra) is spread on buffered subphase. In the presence of Ca 2+ , vertical electron density profiles reconstructed from X-ray scattering imply the “collapse” of saccharide
Increasing evidence suggests that cancers contain a small subset of cancer-initiating cells, so-called cancer stem cells (CSCs) that are capable of regenerating a tumor after chemoradiation therapy. Sphere forming ability is known to be one of properties of CSCs, but the significance remains unclear. The present study focused on sphere formation of human hepatoma cells in three-dimensional culture in order to evaluate the analogy between sphere forming ability and stemness of cancer cells in vit
We establish a lipid monolayer supported by a polymer interface that offers advantages over conventional solid-supported membranes for determining the frictional drag at the membrane-protein interface as well as for electric field manipulation of membrane-anchored proteins. Polymer-supported monolayers with functional lipid anchors allow for the specific docking of His-tagged green fluorescent protein variants (His-EGFP and His-DsRed tetramer) onto the membrane surface at a defined surface densi
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