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Dae‐Sik Lim

Korea Advanced Institute of Science and Technology · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Dae-Sik Lim's research lab focuses on the molecular mechanisms underlying stem cell biology, tissue development, and tumorigenesis, with a central emphasis on the Hippo signaling pathway and its downstream effectors YAP/TAZ. The lab investigates how YAP/TAZ regulate cell fate decisions, organ size control, and tissue homeostasis in diverse contexts, including liver development, angiogenesis, and mesenchymal stem cell differentiation. Using genetically engineered mouse models and primary cell systems, the lab explores the dual roles of YAP/TAZ as transcriptional co-activators and co-repressors, particularly in cancer and regenerative processes. Their work also extends to understanding the crosstalk between Hippo signaling and other key pathways such as Notch and p53 in development and disease.

Hippo pathwayYAP/TAZstem cell fateorgan developmenttumorigenesis

Research Overview

Papers
299
Total Citations
19,028
Papers (5y)
128
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
128total
2022
2023
2024
2025
2026
Citations per year (5y)
238total
20222023202420252026

Selected Papers

15
1
Article|778 citations·2000
ATM phosphorylates p95/nbs1 in an S-phase checkpoint pathway
Dae‐Sik Lim, Seong‐Tae Kim, Bo Xu, Richard S. Maser, Jing‐Jer Lin, John H.J. Petrini, Michael B. Kastan
SJR Q1Nature
Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|691 citations·1996
A Mutation in Mouse rad51 Results in an Early Embryonic Lethal That Is Suppressed by a Mutation in p53
Dae‐Sik Lim, Paul Hasty
SJR Q2Molecular and Cellular BiologyOA

RecA in Escherichia coli and its homolog, ScRad51 in Saccharomyces cerevisiae, are known to be essential for recombinational repair. The homolog of RecA and ScRad51 in mice, MmRad51, was mutated to determine its function. Mutant embryos arrested early during development. A decrease in cell proliferation, followed by programmed cell death and chromosome loss, was observed. Radiation sensitivity was demonstrated in trophectoderm-derived cells. Interestingly, embryonic development progressed furthe

Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
Article|511 citations·2010
The Hippo–Salvador pathway restrains hepatic oval cell proliferation, liver size, and liver tumorigenesis
Kwang‐Pyo Lee, Joo‐Hyeon Lee, Tae‐Shin Kim, Tack-Hoon Kim, Hee‐Dong Park, Jin‐Seok Byun, Minchul Kim, Won‐Il Jeong, Diego F. Calvisi, Jin‐Man Kim, Dae‐Sik Lim
SJR Q1Proceedings of the National Academy of SciencesOA

Loss of Hippo signaling in Drosophila leads to tissue overgrowth as a result of increased cell proliferation and decreased cell death. YAP (a homolog of Drosophila Yorkie and target of the Hippo pathway) was recently implicated in control of organ size, epithelial tissue development, and tumorigenesis in mammals. However, the role of the mammalian Hippo pathway in such regulation has remained unclear. We now show that mice with liver-specific ablation of WW45 (a homolog of Drosophila Salvador an

Cell BiologyBiochemistry, Genetics and Molecular Biology
4
Article|400 citations·2017
YAP/TAZ regulates sprouting angiogenesis and vascular barrier maturation
Jongshin Kim, Yoo Hyung Kim, Jaeryung Kim, Do Young Park, Hosung Bae, Da Hye Lee, Kyun Hoo Kim, Seon Pyo Hong, Seung Pil Jang, Yoshiaki Kubota, Young‐Guen Kwon, Dae‐Sik Lim
SJR Q1Journal of Clinical InvestigationOA

Angiogenesis is a multistep process that requires coordinated migration, proliferation, and junction formation of vascular endothelial cells (ECs) to form new vessel branches in response to growth stimuli. Major intracellular signaling pathways that regulate angiogenesis have been well elucidated, but key transcriptional regulators that mediate these signaling pathways and control EC behaviors are only beginning to be understood. Here, we show that YAP/TAZ, a transcriptional coactivator that act

Cell BiologyBiochemistry, Genetics and Molecular Biology
5
Article|355 citations·2008
ER71 Acts Downstream of BMP, Notch, and Wnt Signaling in Blood and Vessel Progenitor Specification
Dongjun Lee, Changwon Park, Ho Lee, Jesse J. Lugus, Seok Hyung Kim, Elizabeth Arentson, Yun Shin Chung, Gustavo A. Gomez, Michael Kyba, Shuo Lin, Ralf Janknecht, Dae‐Sik Lim
SJR Q1Cell stem cellOA
Cell BiologyBiochemistry, Genetics and Molecular Biology
6
Article|310 citations·2004
The tumour suppressor RASSF1A regulates mitosis by inhibiting the APC–Cdc20 complex
Min Sup Song, Su Jeong Song, Nagi G. Ayad, Jin Sook Chang, Joo Hyun Lee, Hyun Kyung Hong, Ho Lee, Naeyun Choi, Jhingook Kim, Hojoong Kim, Jin Woo Kim, Eui‐Ju Choi
SJR Q1Nature Cell Biology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
7
Article|301 citations·2015
Transcriptional Co-repressor Function of the Hippo Pathway Transducers YAP and TAZ
Minchul Kim, Taekhoon Kim, Randy L. Johnson, Dae‐Sik Lim
SJR Q1Cell ReportsOA

YAP (yes-associated protein) and TAZ are oncogenic transcriptional co-activators downstream of the Hippo tumor-suppressor pathway. However, whether YAP and/or TAZ (YAP/TAZ) engage in transcriptional co-repression remains relatively unexplored. Here, we directly demonstrated that YAP/TAZ represses numerous target genes, including tumor-suppressor genes such as DDIT4 (DNA-damage-inducible transcript 4) and Trail (TNF-related apoptosis-inducing ligand). Mechanistically, the repressor function of YA

Cell BiologyBiochemistry, Genetics and Molecular Biology
8
Article|223 citations·2013
cAMP/PKA signalling reinforces the LATS–YAP pathway to fully suppress YAP in response to actin cytoskeletal changes
Minchul Kim, Mi‐Ju Kim, Seung‐Hee Lee, Shinji Kuninaka, Hideyuki Saya, Ho Lee, Sookyung Lee, Dae‐Sik Lim
SJR Q1The EMBO JournalOA
Cell BiologyBiochemistry, Genetics and Molecular Biology
9
Article|220 citations·2013
SOX2 Regulates YAP1 to Maintain Stemness and Determine Cell Fate in the Osteo-Adipo Lineage
Eunjeong Seo, Upal Basu-Roy, Preethi H. Gunaratne, Cristian Coarfa, Dae‐Sik Lim, Claudio Basilico, Alka Mansukhani
SJR Q1Cell ReportsOA

The osteoblastic and adipocytic lineages arise from mesenchymal stem cells (MSCs), but few regulators of self-renewal and early cell-fate decisions are known. Here, we show that the Hippo pathway effector YAP1 is a direct target of SOX2 and can compensate for the self-renewal defect caused by SOX2 inactivation in osteoprogenitors and MSCs. Osteogenesis is blocked by high SOX2 or YAP1, accelerated by depletion of either one, and the inhibition of osteogenesis by SOX2 requires YAP1. SOX2 favors ad

Cell BiologyBiochemistry, Genetics and Molecular Biology
10
Article|201 citations·2016
LATS-YAP/TAZ controls lineage specification by regulating TGFβ signaling and Hnf4α expression during liver development
Da Hye Lee, Jae Oh Park, Tae‐Shin Kim, Sang Kyum Kim, Tack-hoon Kim, Minchul Kim, Gun Soo Park, Jeong‐Hwan Kim, Shinji Kuninaka, Eric N. Olson, Hideyuki Saya, Seon‐Young Kim
SJR Q1Nature CommunicationsOA

The Hippo pathway regulates the self-renewal and differentiation of various adult stem cells, but its role in cell fate determination and differentiation during liver development remains unclear. Here we report that the Hippo pathway controls liver cell lineage specification and proliferation separately from Notch signalling, using mice and primary hepatoblasts with liver-specific knockout of Lats1 and Lats2 kinase, the direct upstream regulators of YAP and TAZ. During and after liver developmen

Cell BiologyBiochemistry, Genetics and Molecular Biology
11
Article|191 citations·2008
A crucial role of WW45 in developing epithelial tissues in the mouse
Joo‐Hyeon Lee, Tae‐Shin Kim, Tae-Hong Yang, Bon‐Kyoung Koo, Sang-Phil Oh, Kwang‐Pyo Lee, Hyun-Jung Oh, Sang‐Hee Lee, Young‐Yun Kong, Jin‐Man Kim, Dae‐Sik Lim
SJR Q1The EMBO JournalOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
12
Article|185 citations·1998
ATM binds to β-adaptin in cytoplasmic vesicles
Dae‐Sik Lim, David G. Kirsch, Christine E. Canman, Jin-Hyun Ahn, Yael Ziv, Lori S. Newman, Robert B. Darnell, Yosef Shiloh, Michael B. Kastan
SJR Q1Proceedings of the National Academy of SciencesOA

Inherited mutations in the ATM gene lead to a complex clinical phenotype characterized by neuronal degeneration, oculocutaneous telangiectasias, immune dysfunction, and cancer predisposition. Using the yeast two-hybrid system, we demonstrate that ataxia telangiectasia mutated (ATM) binds to beta-adaptin, one of the components of the AP-2 adaptor complex, which is involved in clathrin-mediated endocytosis of receptors. The interaction between ATM and beta-adaptin was confirmed in vitro, and coimm

Molecular BiologyBiochemistry, Genetics and Molecular Biology
13
Article|181 citations·2015
A basal-like breast cancer-specific role for SRF–IL6 in YAP-induced cancer stemness
Tackhoon Kim, Suk-Jin Yang, Daehee Hwang, Jinhoi Song, Minchul Kim, Sang Kyum Kim, Keunsoo Kang, Jaebum Ahn, Daeyoup Lee, Mi‐Young Kim, Seyun Kim, Ja Seung Koo
SJR Q1Nature CommunicationsOA

The switch between stem/progenitor cell expansion and differentiation is critical for organ homeostasis. The mammalian Hippo pathway effector and oncoprotein YAP expands undifferentiated stem/progenitor cells in various tissues. However, the YAP-associated transcription factors and downstream targets underlying this stemness-promoting activity are poorly understood. Here we show that the SRF-IL6 axis is the critical mediator of YAP-induced stemness in mammary epithelial cells and breast cancer.

Cell BiologyBiochemistry, Genetics and Molecular Biology
14
Article|162 citations·2000
Analysis of ku80-Mutant Mice and Cells with Deficient Levels of p53
Dae‐Sik Lim, Hannes Vogel, Dennis M. Willerford, Arthur Sands, Kenneth A. Platt, Paul Hasty
SJR Q2Molecular and Cellular BiologyOA

Absence of Ku80 results in increased sensitivity to ionizing radiation, defective lymphocyte development, early onset of an age-related phenotype, and premature replicative senescence. Here we investigate the role of p53 on the phenotype of ku80-mutant mice and cells. Reducing levels of p53 increased the cancer incidence for ku80(-/-) mice. About 20% of ku80(-/-) p53(+/-) mice developed a broad spectrum of cancer by 40 weeks and all ku80(-/-) p53(-/-) mice developed pro-B-cell lymphoma by 16 wee

OncologyMedicine
15
Article|147 citations·2018
YAP/TAZ Initiates Gastric Tumorigenesis via Upregulation of MYC
Wonyoung Choi, Jeongsik Kim, Jaeoh Park, Da-Hye Lee, Daehee Hwang, Jeong‐Hwan Kim, Hassan Ashktorab, Duane T. Smoot, Seon‐Young Kim, Chan Choi, Gou Young Koh, Dae‐Sik Lim
SJR Q1Cancer ResearchOA

Abstract YAP and TAZ play oncogenic roles in various organs, but the role of YAP/TAZ in gastric cancer remains unclear. Here, we show that YAP/TAZ activation initiates gastric tumorigenesis in vivo and verify its significance in human gastric cancer. In mice, YAP/TAZ activation in the pyloric stem cell led to step-wise tumorigenesis. RNA sequencing identified MYC as a decisive target of YAP, which controls MYC at transcriptional and posttranscriptional levels. These mechanisms tightly regulated

Cell BiologyBiochemistry, Genetics and Molecular Biology

Research Areas

Cell BiologyMolecular BiologyOncologyBiomedical EngineeringControl and Systems EngineeringHematology

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