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Eunjoon Kim

Korea Advanced Institute of Science and Technology · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Eunjoon Kim's research lab focuses on the molecular mechanisms underlying synaptic organization, particularly the roles of scaffolding proteins and cell adhesion molecules in synapse formation, function, and plasticity. The lab investigates how postsynaptic proteins such as PSD-95, Shank3, and stargazin regulate the clustering and trafficking of neurotransmitter receptors and ion channels at excitatory synapses. Using genetic, biochemical, and imaging approaches in mouse models and neuronal cultures, the lab explores the structural and functional basis of synaptic protein interactions, with implications for neurodevelopmental disorders such as autism spectrum disorders. Their work also extends to understanding the regulation of calcium homeostasis and signaling at the synapse through interactions involving plasma membrane Ca²⁺ ATPases and MAGUK family proteins.

synaptic scaffoldingsynapse formationion channel clusteringneurodevelopmental disordersPDZ domain interactions

Research Overview

Papers
310
Total Citations
24,462
Papers (5y)
65
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
65total
2022
2023
2024
2025
2026
Citations per year (5y)
3,544total
20222023202420252026

Selected Papers

15
1
Review|1,573 citations·2004
PDZ domain proteins of synapses
Eunjoon Kim, Morgan Sheng
SJR Q1Nature reviews. Neuroscience
Cellular and Molecular NeuroscienceNeuroscience
2
Article|997 citations·1995
Clustering of Shaker-type K+ channels by interaction with a family of membrane-associated guanylate kinases
Eunjoon Kim, Martin Niethammer, Adam Rothschild, Yuh Nung Jan, Morgan Sheng
SJR Q1Nature
Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
Article|719 citations·2012
Autistic-like social behaviour in Shank2-mutant mice improved by restoring NMDA receptor function
Hyejung Won, Hye‐Ryeon Lee, Heon Yung Gee, Won Mah, Jae‐Ick Kim, Jiseok Lee, Seungmin Ha, Changuk Chung, Eun Suk Jung, Yi Sul Cho, Sae-Geun Park, Jungsoo Lee
SJR Q1NatureOA
GeneticsBiochemistry, Genetics and Molecular Biology
4
Article|513 citations·1997
GKAP, a Novel Synaptic Protein That Interacts with the Guanylate Kinase-like Domain of the PSD-95/SAP90 Family of Channel Clustering Molecules
Eunjoon Kim, Scott Naisbitt, Yi‐Ping Hsueh, Anuradha Rao, Adam Rothschild, Ann Marie Craig, Morgan Sheng
SJR Q1The Journal of Cell BiologyOA

The molecular mechanisms underlying the organization of ion channels and signaling molecules at the synaptic junction are largely unknown. Recently, members of the PSD-95/SAP90 family of synaptic MAGUK (membrane-associated guanylate kinase) proteins have been shown to interact, via their NH2-terminal PDZ domains, with certain ion channels (NMDA receptors and K+ channels), thereby promoting the clustering of these proteins. Although the function of the NH2-terminal PDZ domains is relatively well

Cellular and Molecular NeuroscienceNeuroscience
5
Article|308 citations·1999
Characterization of the Shank Family of Synaptic Proteins
Sangmi Lim, Scott Naisbitt, Ji-Young Yoon, Jong‐Ik Hwang, Pann‐Ghill Suh, Morgan Sheng, Eunjoon Kim
SJR Q1Journal of Biological ChemistryOA

Shank1, Shank2, and Shank3 constitute a family of proteins that may function as molecular scaffolds in the postsynaptic density (PSD). Shank directly interacts with GKAP and Homer, thus potentially bridging the N-methyl-D-aspartate receptor-PSD-95-GKAP complex and the mGluR-Homer complex in synapses (Naisbitt, S., Kim, E., Tu, J. C. , Xiao, B., Sala, S., Valtschanoff, J., Weinberg, R. J., Worley, P. F., and Sheng, M. (1999) Neuron 23, 569-582; Tu, J. C., Xiao, B., Naisbitt, S., Yuan, J. P., Petr

Cellular and Molecular NeuroscienceNeuroscience
6
Article|275 citations·2006
NGL family PSD-95–interacting adhesion molecules regulate excitatory synapse formation
Se-Ho Kim, A Burette, Hye Sun Chung, Seok‐Kyu Kwon, Jooyeon Woo, Hyun Woo Lee, Karam Kim, Hyun Kim, Richard J. Weinberg, Eunjoon Kim
SJR Q1Nature Neuroscience
Cellular and Molecular NeuroscienceNeuroscience
7
Article|225 citations·2009
Trans-synaptic adhesion between NGL-3 and LAR regulates the formation of excitatory synapses
Jooyeon Woo, Seok‐Kyu Kwon, Seungwon Choi, Se-Ho Kim, Jae-Ran Lee, Anthone W. Dunah, Morgan Sheng, Eunjoon Kim
SJR Q1Nature Neuroscience
Cellular and Molecular NeuroscienceNeuroscience
8
Article|207 citations·2003
Association of the Kinesin Motor KIF1A with the Multimodular Protein Liprin-α
Hye‐Won Shin, Michael Wyszynski, Kyung Hye Huh, Juli G. Valtschanoff, Jae-Ran Lee, Jaewon Ko, Michel Streuli, Richard J. Weinberg, Morgan Sheng, Eunjoon Kim
SJR Q1Journal of Biological ChemistryOA

Liprin-alpha/SYD-2 is a multimodular scaffolding protein important for presynaptic differentiation and postsynaptic targeting of alpha-amino-3-hydroxy-5-methyl-4-isoxazoleproprionic acid glutamate receptors. However, the molecular mechanisms underlying these functions remain largely unknown. Here we report that liprin-alpha interacts with the neuron-specific kinesin motor KIF1A. KIF1A colocalizes with liprin-alpha in various subcellular regions of neurons. KIF1A coaccumulates with liprin-alpha i

Cell BiologyBiochemistry, Genetics and Molecular Biology
9
Article|193 citations·2003
Interaction of the ERC Family of RIM-binding Proteins with the Liprin-α Family of Multidomain Proteins
Jaewon Ko, Moonseok Na, Se-Ho Kim, Jae-Ran Lee, Eunjoon Kim, Eunjoon Kim
SJR Q1Journal of Biological ChemistryOA

Liprin-alpha/SYD-2 is a family of multidomain proteins with four known isoforms. One of the reported functions of liprin-alpha is to regulate the development of presynaptic active zones, but the underlying mechanism is poorly understood. Here we report that liprin-alpha directly interacts with the ERC (ELKS-Rab6-interacting protein-CAST) family of proteins, members of which are known to bind RIMs, the active zone proteins that regulate neurotransmitter release. In vitro results indicate that ERC

Cell BiologyBiochemistry, Genetics and Molecular Biology
10
Article|181 citations·2015
NMDA receptor dysfunction in autism spectrum disorders
Eun‐Jae Lee, Su‐Yeon Choi, Eunjoon Kim
SJR Q1Current Opinion in Pharmacology
Cellular and Molecular NeuroscienceNeuroscience
11
Article|174 citations·2003
The Shank Family of Postsynaptic Density Proteins Interacts with and Promotes Synaptic Accumulation of the βPIX Guanine Nucleotide Exchange Factor for Rac1 and Cdc42
Eunhye Park, Moonseok Na, Jeonghoon Choi, Se-Ho Kim, Jae-Ran Lee, Jiyoung Yoon, Dongeun Park, Morgan Sheng, Eunjoon Kim
SJR Q1Journal of Biological ChemistryOA

The Shank/ProSAP family of multidomain proteins is known to play an important role in organizing synaptic multiprotein complexes. Here we report a novel interaction between Shank and beta PIX, a guanine nucleotide exchange factor for the Rac1 and Cdc42 small GTPases. This interaction is mediated by the PDZ domain of Shank and the C-terminal leucine zipper domain and the PDZ domain-binding motif at the extreme C terminus of beta PIX. Shank colocalizes with beta PIX at excitatory synaptic sites in

Cell BiologyBiochemistry, Genetics and Molecular Biology
12
Article|164 citations·2015
Social deficits in IRSp53 mutant mice improved by NMDAR and mGluR5 suppression
Woosuk Chung, Su Yeon Choi, Eunee Lee, Haram Park, Jaeseung Kang, Hanwool Park, Yeonsoo Choi, Dongsoo Lee, Sae-Geun Park, Ryunhee Kim, Yi Sul Cho, Jeonghoon Choi
SJR Q1Nature Neuroscience
Cellular and Molecular NeuroscienceNeuroscience
13
Article|163 citations·2018
Sexually dimorphic behavior, neuronal activity, and gene expression in Chd8-mutant mice
Hwajin Jung, Haram Park, Yeonsoo Choi, Hyojin Kang, Eunee Lee, Hanseul Kweon, Junyeop Daniel Roh, Jacob Ellegood, Woochul Choi, Jaeseung Kang, Issac Rhim, Su‐Yeon Choi
SJR Q1Nature Neuroscience
GeneticsBiochemistry, Genetics and Molecular Biology
14
Article|162 citations·2010
Trans-synaptic Adhesions between Netrin-G Ligand-3 (NGL-3) and Receptor Tyrosine Phosphatases LAR, Protein-tyrosine Phosphatase δ (PTPδ), and PTPσ via Specific Domains Regulate Excitatory Synapse Formation
Seok‐Kyu Kwon, Jooyeon Woo, Soo‐Young Kim, Hyun Kim, Eunjoon Kim
SJR Q1Journal of Biological ChemistryOA

Synaptic cell adhesion molecules regulate various steps of synapse formation. The trans-synaptic adhesion between postsynaptic NGL-3 (for netrin-G ligand-3) and presynaptic LAR (for leukocyte antigen-related) regulates excitatory synapse formation in a bidirectional manner. However, little is known about the molecular details of the NGL-3-LAR adhesion and whether two additional LAR family proteins, protein-tyrosine phosphatase delta (PTPdelta), and PTPsigma, also interact with NGL-3 and are invo

Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Review|161 citations·2007
Synaptic adhesion molecules and PSD-95
Kihoon Han, Eunjoon Kim
SJR Q1Progress in Neurobiology
Cellular and Molecular NeuroscienceNeuroscience

Research Areas

Cellular and Molecular NeuroscienceMolecular BiologyGeneticsCognitive NeuroscienceCell BiologyPulmonary and Respiratory Medicine

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