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Geun-Joo Kim

Korea University · Medicine

About the Lab

Professor Geun-Joo Kim's research lab specializes in clinical microbiology and molecular diagnostics, with a focus on improving the rapid and accurate detection of mycobacterial and respiratory pathogens. The lab investigates advanced molecular techniques such as real-time PCR, multiplex qPCR, and next-generation sequencing to enhance pathogen identification and antimicrobial resistance profiling. Key research directions include optimizing specimen selection for respiratory infections, developing and validating novel molecular assays for tuberculosis and nontuberculous mycobacteria, and evaluating innovative diagnostic platforms for timely clinical decision-making. The lab's work bridges translational research and clinical application to improve patient outcomes in infectious diseases.

molecular diagnosticsmycobacterial infectionsrespiratory pathogensantimicrobial resistancemultiplex PCR

Research Overview

Papers
20
Total Citations
60
Papers (5y)
16
Primary Field
Medicine

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
16total
2022
2023
2024
2025
2026
Citations per year (5y)
49total
20222023202420252026

Selected Papers

15
1
Article|16 citations·2022
Isolation and Antimicrobial Susceptibility of Nontuberculous Mycobacteria in a Tertiary Hospital in Korea, 2016 to 2020
Keun Ju Kim, Seung Hwan Oh, Doosoo Jeon, Chulhun L. Chang
SJR Q2Tuberculosis & respiratory diseasesOA

BACKGROUND: There is a global increase in isolation of nontuberculous mycobacteria (NTM). The aim of the study was to analyze longitudinal trends of NTM identification and pattern of antimicrobial susceptibility testing. METHODS: NTM recovery rates, distribution of NTM species identification, and antimicrobial susceptibility pattern of NTM at Pusan National University Yangsan Hospital between January 2016 and December 2020 were retrospectively analyzed. RESULTS: A total of 52,456 specimens from

EpidemiologyMedicine
2
Article|9 citations·2024
Rapid Direct Identification of Microbial Pathogens and Antimicrobial Resistance Genes in Positive Blood Cultures Using a Fully Automated Multiplex PCR Assay
Keun Ju Kim, Seung Gyu Yun, Yunjung Cho, Chang Kyu Lee, Myung‐Hyun Nam
SJR Q2Journal of Korean Medical ScienceOA

. BCID2 correctly predicted 53 (96.4%) of 55 phenotypic resistance patterns by detecting AMR genes. The TAT for BCID2 was significantly lower than that for the conventional method. BCID2 rapidly identifies pathogens and AMR genes in positive BCs.

Clinical BiochemistryBiochemistry, Genetics and Molecular Biology
3
letter|5 citations·2020
Bundles of Auer rods in mature neutrophils in a pediatric acute myeloid leukemia patient with inv(16)(p13.1q22)
Keun Ju Kim, In‐Suk Kim
SJR Q2International Journal of Laboratory Hematology
HematologyMedicine
4
Article|4 citations·2023
Evaluation of a New Chemiluminescent Immunoassay-Based Interferon-Gamma Release Assay for Detection of Latent Tuberculosis Infection
Keun Ju Kim, Seong-Eun Ryu, Hana Lee, Seung Hwan Oh, Chulhun L. Chang
SJR Q2MedicinaOA

Background and Objectives: This study aimed to evaluate the performance of a new chemiluminescent immunoassay-based tuberculosis (TB) interferon-gamma release assay (IGRA), AdvanSureI3 TB-IGRA (LG Chem Ltd., Seoul, Republic of Korea), for detecting latent tuberculosis infection in comparison with T-SPOT.TB (Oxford Immunotec, Oxford, UK). Materials and Methods: Between June 2021 and December 2021, 125 non-duplicate blood specimens were collected from adult volunteers; each subject received both t

Infectious DiseasesMedicine
5
Article|4 citations·2025
Comparing sputum, nasopharyngeal swabs, and combined samples for respiratory bacterial detection using multiplex PCR
Keun Ju Kim, Seung Gyu Yun, Myung‐Hyun Nam, Chang Kyu Lee, Yunjung Cho
SJR Q1Microbiology SpectrumOA

ABSTRACT Respiratory tract infections are major global health issues that require rapid and accurate diagnostic methods. Multiplex quantitative PCR (qPCR) is commonly used for pathogen detection in respiratory samples. However, the optimal specimen selection for detecting bacterial pathogens is not well-explored. We evaluated the detection rates of respiratory bacteria from nasopharyngeal swabs (NPS), sputum, and combined NPS and sputum samples using multiplex qPCR (Allplex PneumoBacter Assay, S

EpidemiologyMedicine
6
Article|4 citations·2019
Temporary Cessation of Immunosuppression for Infection May Contribute to the Development of Graft-vs-Host Disease After ABO-Incompatible Living Donor Liver Transplantation: A Case Report
Keun Ju Kim, Tae Beom Lee, Kwang Ho Yang, Je Ho Ryu, Byung Hyun Choi, Hyunji Lee, Sun Min Lee, In‐Suk Kim
SJR Q3Transplantation Proceedings
HematologyMedicine
7
Article|3 citations·2024
Evaluation of a Commercial Multiplex Real-Time PCR with Melting Curve Analysis for the Detection of Mycobacterium tuberculosis Complex and Five Nontuberculous Mycobacterial Species
Keun Ju Kim, Yunhee Chang, Seung Gyu Yun, Myung‐Hyun Nam, Yunjung Cho
SJR Q2MicroorganismsOA

Background: Accurate and timely diagnosis of mycobacterial infections, including Mycobacterium tuberculosis complex (MTBC) and nontuberculous mycobacteria (NTM), is crucial for effective disease management. Methods: This study evaluated the performance of the NeoPlex TB/NTM-5 Detection Kit (NeoPlex assay, Seongnam, Republic of Korea), a multiplex real-time PCR assay that incorporates melting curve analysis, compared with the line-probe assay (LPA). The NeoPlex assay could simultaneously detect a

EpidemiologyMedicine
8
Article|3 citations·2023
Evaluation of a sterile, filter-based, in-house method for rapid direct bacterial identification and antimicrobial susceptibility testing using positive blood culture
Keun Ju Kim, Seung Gyu Yun, Yunjung Cho, Myung‐Hyun Nam, Young Jin Ko, Chang Kyu Lee
SJR Q1European Journal of Clinical Microbiology & Infectious Diseases
Clinical BiochemistryBiochemistry, Genetics and Molecular Biology
9
Article|3 citations·2023
Evaluation of Multiplex Rapid Antigen Test for the Detection of SARS-CoV-2 and Influenza A/B in Respiratory Samples
Takho Kang, Jae Min Hyun, Juyeon Kim, Keun Ju Kim, Minjeong Nam, Myung‐Hyun Nam, Dae Won Kim, Yunjung Cho, Chang Kyu Lee, Seung Gyu Yun
SSRN Electronic JournalOA
Infectious DiseasesMedicine
10
Article|2 citations·2021
Acute Hemolysis Due to Rh Antibodies Against C and e Antigens after Rh-incompatible Transfusion in a Patient, Not Detected During Pre-transfusion Testing
Keun Ju Kim, Hyunji Lee, Seung Hwan Oh, In‐Suk Kim
Laboratory Medicine OnlineOA

range . Due to the low level of hemoglobin, one unit of packed red blood cells (RBCs) was requested.

HematologyMedicine
11
Article|2 citations·2022
Usefulness of Combining Sputum and Nasopharyngeal Samples for Viral Detection by Reverse Transcriptase PCR in Adults Hospitalized with Acute Respiratory Illness
Keun Ju Kim, Seung Gyu Yun, Yunjung Cho, Myung‐Hyun Nam, Chang Kyu Lee
SJR Q1Microbiology SpectrumOA

This study reveals that RT-PCR utilizing sputum significantly increased the detection rate for respiratory viral nucleic acids among adult patients admitted to the hospital, compared to nasopharyngeal swabs (NPS). Notably, combined samples of sputum and NPS maintained the majority of the improved sputum detection rate with only a few positive signal losses from NPS samples. In order to detect respiratory viruses in adult patients with acute respiratory illness, it is important to choose the opti

EpidemiologyMedicine
12
Article|2 citations·2025
Safety of intradermal Danish- vs. transcutaneous Tokyo-strain BCG vaccination in Korean children: A nationwide cohort study
Young Hwa Lee, Eunseon Gwak, Hyun Mi Kang, Young June Choe, Youn Young Choi, Keun Ju Kim, Cho Ryok Kang, Won Suk Choi, Ji Yun Noh, Nam‐Kyong Choi, Na‐Young Jeong, Jong‐Koo Lee
SJR Q1Vaccine
ImmunologyImmunology and Microbiology
13
Preprint|1 citations·2025
Plasma-Free Metanephrine and Normetanephrine Quantification for Clinical Applications Validated by Combining Solid-Phase Extraction and HPLC-MS/MS
Hyebin Choi, Jisook Yim, Jiwon Yun, Jong Kwon Lee, Keun Ju Kim, Minjeong Nam, Myung‐Hyun Nam, Yunjung Cho, Seung Gyu Yun
Preprints.orgOA

Plasma-free metanephrines are considered the most sensitive and specific biochemical markers for the diagnosis of catecholamine-secreting tumors, such as pheochromocytoma and paraganglioma. In this study, we developed and validated a liquid chromatography–tandem mass spectrometry method for quantifying metanephrine and normetanephrine in human plasma, using solid-phase extraction with a weak cation-exchange mechanism. The method was validated according to the FDA Bioanalytical Method Validation

SurgeryMedicine
14
Article|1 citations·2023
Assessment of Omitting MacConkey Agar as a Primary Inoculating Medium for MALDI-TOF MS-Based Bacterial Identification from Urine, Blood, and Respiratory Samples.
Keun Ju Kim, Duyeal Song, Seung Hwan Oh, Chulhun L. Chang
PubMed

OBJECTIVE: MacConkey agar (MAC) is commonly used as a primary medium for conventional bacterial identification in clinical microbiology laboratories. Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) has revolutionized microbial identification and is considered a reliable identification tool. While conventional identification methods rely on colony characteristics, MALDI-TOF MS requires a pure isolate on a solid medium. METHODS: This study investigated w

Clinical BiochemistryBiochemistry, Genetics and Molecular Biology
15
Article|1 citations·2025
Clinical Implications of Bacteremia Caused by Non-baumannii Acinetobacter Compared with Those of Acinetobacter baumannii Bacteremia
Jin Woong Suh, Ji Young Hong, Keun Ju Kim, Duck Jin Hong, Sun Bean Kim
SJR Q1BiomedicinesOA

Objectives: This study aimed to compare clinical characteristics, antimicrobial susceptibility, and 28-day mortality between patients with Acinetobacter baumannii bacteremia (ABB) and non-baumannii Acinetobacter bacteremia (NBAB) after rapid matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry (MS) species identification. Methods: We retrospectively reviewed the clinical data of adult ABB and NBAB patients over >7 years. Multivariate logistic regression was

Molecular MedicineBiochemistry, Genetics and Molecular Biology

Research Areas

EpidemiologyClinical BiochemistryHematologyInfectious DiseasesImmunologySurgery

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