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Il-Min Kwon

Sungkyunkwan University · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Il-Min Kwon's research lab focuses on the molecular mechanisms underlying circadian rhythms and post-transcriptional gene regulation, with a particular emphasis on RNA-binding proteins, phase-separated biomolecular condensates, and the dynamic regulation of transcription factors such as CLOCK-BMAL1. The lab investigates how post-translational modifications, including phosphorylation, control protein localization and function in cellular rhythms and stress responses. Additionally, the lab explores the interplay between host immunity, the microbiome, and redox signaling in intestinal homeostasis, particularly through molecules like Duox and TRPA1.

circadian clockRNA regulationbiomolecular condensatestranscriptional regulationhost-microbiome interaction

Research Overview

Papers
29
Total Citations
2,817
Papers (5y)
10
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
10total
2020
2021
2022
2023
2025
Citations per year (5y)
159total
20202021202220232025

Selected Papers

15
1
Article|682 citations·2014
Poly-dipeptides encoded by the C9orf72 repeats bind nucleoli, impede RNA biogenesis, and kill cells
Ilmin Kwon, Siheng Xiang, Masato Kato, Leeju C. Wu, Pano Theodoropoulos, Tao Wang, Jiwoong Kim, Jonghyun Yun, Yang Xie, Steven L. McKnight
SJR Q1ScienceOA

Many RNA regulatory proteins controlling pre-messenger RNA splicing contain serine:arginine (SR) repeats. Here, we found that these SR domains bound hydrogel droplets composed of fibrous polymers of the low-complexity domain of heterogeneous ribonucleoprotein A2 (hnRNPA2). Hydrogel binding was reversed upon phosphorylation of the SR domain by CDC2-like kinases 1 and 2 (CLK1/2). Mutated variants of the SR domains changing serine to glycine (SR-to-GR variants) also bound to hnRNPA2 hydrogels but w

Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|574 citations·2013
Phosphorylation-Regulated Binding of RNA Polymerase II to Fibrous Polymers of Low-Complexity Domains
Ilmin Kwon, Masato Kato, Siheng Xiang, Leeju C. Wu, Pano Theodoropoulos, Hamid Mirzaei, Tina Han, Shanhai Xie, Jeffry L. Corden, Steven L. McKnight
SJR Q1CellOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
Article|480 citations·2016
Toxic PR Poly-Dipeptides Encoded by the C9orf72 Repeat Expansion Target LC Domain Polymers
Yi Lin, Eiichiro Mori, Masato Kato, Siheng Xiang, Leeju C. Wu, Ilmin Kwon, Steven L. McKnight
SJR Q1CellOA
NeurologyMedicine
4
Article|201 citations·2018
A splice variant of human Bmal1 acts as a negative regulator of the molecular circadian clock
Ji‐Won Lee, Eonyoung Park, Ga Hye Kim, Ilmin Kwon, Kyungjin Kim
SJR Q1Experimental & Molecular MedicineOA

Bmal1 is one of the key molecules that controls the mammalian molecular clock. In humans, two isoforms of Bmal1 are generated by alternative RNA splicing. Unlike the extensively studied hBmal1b, the canonical form of Bmal1 in most species, the expression and/or function of another human-specific isoform, hBmal1a, are poorly understood. Due to the lack of the N-terminal nuclear localization signal (NLS), hBMAL1a does not enter the nucleus as hBMAL1b does. However, despite the lack of the NLS, hBM

Endocrine and Autonomic SystemsNeuroscience
5
Article|161 citations·2006
BMAL1 Shuttling Controls Transactivation and Degradation of the CLOCK/BMAL1 Heterodimer
Ilmin Kwon, Ji‐Won Lee, Seok Hoon Chang, Neon Cheol Jung, Byung Ju Lee, Gi Hoon Son, Kyungjin Kim, Kun Ho Lee
SJR Q2Molecular and Cellular BiologyOA

CLOCK and BMAL1 are bHLH-PAS-containing transcription factors that bind to E-box elements and are indispensable for expression of core circadian clock components such as the Per and Cry genes. A key step in expression is the heterodimerization of CLOCK and BMAL1 and their accumulation in the nucleus with an approximately 24-h periodicity. We show here that nucleocytoplasmic shuttling of BMAL1 is essential for transactivation and for degradation of the CLOCK/BMAL1 heterodimer. Using serial deleti

Endocrine and Autonomic SystemsNeuroscience
6
Article|120 citations·2010
Coactivation of the CLOCK–BMAL1 complex by CBP mediates resetting of the circadian clock
Yool Lee, Ji‐Won Lee, Ilmin Kwon, Yoshihiro Nakajima, Yoshihiro Ohmiya, Gi Hoon Son, Kun Ho Lee, Kyungjin Kim
SJR Q2Journal of Cell Science

The transcription factor CLOCK-BMAL1 is a core component of the molecular clock machinery that drives circadian gene expression and physiology in mammals. Recently, we reported that this heterodimeric transcription factor functions as a signaling molecule in response to the resetting stimuli via the Ca²+-dependent protein kinase C pathway. Here, we demonstrate that the CREB-binding protein (CBP) plays a key role in rapid activation of the CLOCK-BMAL1 heterodimer that leads to phase resetting of

Endocrine and Autonomic SystemsNeuroscience
7
Article|84 citations·2016
TrpA1 Regulates Defecation of Food-Borne Pathogens under the Control of the Duox Pathway
Eun Jo Du, Tae Jung Ahn, Ilmin Kwon, Ji Hye Lee, Jeong-Ho Park, Sun Hwa Park, Tong Mook Kang, Hana Cho, Tae Jin Kim, Hyung-Wook Kim, Youngsoo Jun, Hee Jae Lee
SJR Q1PLoS GeneticsOA

Pathogen expulsion from the gut is an important defense strategy against infection, but little is known about how interaction between the intestinal microbiome and host immunity modulates defecation. In Drosophila melanogaster, dual oxidase (Duox) kills pathogenic microbes by generating the microbicidal reactive oxygen species (ROS), hypochlorous acid (HOCl) in response to bacterially excreted uracil. The physiological function of enzymatically generated HOCl in the gut is, however, unknown asid

ImmunologyImmunology and Microbiology
8
Article|59 citations·2010
Processing of microcellular silicon carbide ceramics with a duplex pore structure
In‐Hyuck Song, Ilmin Kwon, Hai-Doo Kim, Young‐Wook Kim
SJR Q1Journal of the European Ceramic Society
Ceramics and CompositesMaterials Science
9
Article|58 citations·2011
Mammalian Molecular Clocks
Ilmin Kwon, Han Kyoung Choe, Gi Hoon Son, Kyungjin Kim
SJR Q2Experimental NeurobiologyOA

As a consequence of the Earth's rotation, almost all organisms experience day and night cycles within a 24-hr period. To adapt and synchronize biological rhythms to external daily cycles, organisms have evolved an internal time-keeping system. In mammals, the master circadian pacemaker residing in the suprachiasmatic nucleus (SCN) of the anterior hypothalamus generates circadian rhythmicity and orchestrates numerous subsidiary local clocks in other regions of the brain and peripheral tissues. Re

Endocrine and Autonomic SystemsNeuroscience
10
Review|55 citations·2022
Phase separation of low-complexity domains in cellular function and disease
Jiwon Lee, Hana Cho, Ilmin Kwon
SJR Q1Experimental & Molecular MedicineOA

In this review, we discuss the ways in which recent studies of low-complexity (LC) domains have challenged our understanding of the mechanisms underlying cellular organization. LC sequences, long believed to function in the absence of a molecular structure, are abundant in the proteomes of all eukaryotic organisms. Over the past decade, the phase separation of LC domains has emerged as a fundamental mechanism driving dynamic multivalent interactions of many cellular processes. We review the key

Molecular BiologyBiochemistry, Genetics and Molecular Biology
11
Article|51 citations·2015
The Mosquito Repellent Citronellal Directly Potentiates Drosophila TRPA1, Facilitating Feeding Suppression
Eun Jo Du, Tae Jung Ahn, Min Sung Choi, Ilmin Kwon, Hyung‐Wook Kim, Jae Young Kwon, KyeongJin Kang
SJR Q1Molecules and CellsOA

Citronellal, a well-known plant-derived mosquito repellent, was previously reported to repel Drosophila melanogaster via olfactory pathways involving but not directly activating Transient Receptor Potential Ankyrin 1 (TRPA1). Here, we show that citronellal is a direct agonist for Drosophila and human TRPA1s (dTRPA1 and hTRPA1) as well as Anopheles gambiae TRPA1 (agTRPA1). Citronellal-induced activity is isoform-dependent for Drosophila and Anopheles gambiae TRPA1s. The recently identified dTRPA1

Cellular and Molecular NeuroscienceNeuroscience
12
Article|36 citations·2021
Distinct roles of hnRNPH1 low-complexity domains in splicing and transcription
Ga Hye Kim, Ilmin Kwon
SJR Q1Proceedings of the National Academy of SciencesOA

Heterogeneous nuclear ribonucleoproteins (hnRNPs) represent a large family of RNA-binding proteins that control key events in RNA biogenesis under both normal and diseased cellular conditions. The low-complexity (LC) domain of hnRNPs can become liquid-like droplets or reversible amyloid-like polymers by phase separation. Yet, whether phase separation of the LC domains contributes to physiological functions of hnRNPs remains unclear. hnRNPH1 contains two LC domains, LC1 and LC2. Here, we show tha

Molecular BiologyBiochemistry, Genetics and Molecular Biology
13
Article|36 citations·2019
PRMT1 suppresses ATF4-mediated endoplasmic reticulum response in cardiomyocytes
Myong‐Ho Jeong, Hyeon‐Ju Jeong, Byeong-Yun Ahn, Jung‐Hoon Pyun, Ilmin Kwon, Hana Cho, Jong‐Sun Kang
SJR Q1Cell Death and DiseaseOA

Endoplasmic reticulum (ER) stress signaling plays a critical role in the control of cell survival or death. Persistent ER stress activates proapoptotic pathway involving the ATF4/CHOP axis. Although accumulating evidences support its important contribution to cardiovascular diseases, but its mechanism is not well characterized. Here, we demonstrate a critical role for PRMT1 in the control of ER stress in cardiomyocytes. The inhibition of PRMT1 augments tunicamycin (TN)-triggered ER stress respon

Cell BiologyBiochemistry, Genetics and Molecular Biology
14
Article|35 citations·2011
Regulatory Roles of Heterogeneous Nuclear Ribonucleoprotein M and Nova-1 Protein in Alternative Splicing of Dopamine D2 Receptor Pre-mRNA
Eonyoung Park, Ciro Iaccarino, Jiwon Lee, Ilmin Kwon, Sun Mi Baik, Myung‐Jin Kim, Jae Young Seong, Gi Hoon Son, Emiliana Borrelli, Kyungjin Kim
SJR Q1Journal of Biological ChemistryOA

The dopamine D2 receptor (D2R) plays a crucial role in the regulation of diverse key physiological functions, including motor control, reward, learning, and memory. This receptor is present in vivo in two isoforms, D2L and D2S, generated from the same gene by alternative pre-mRNA splicing. Each isoform has a specific role in vivo, underlining the importance of a strict control of its synthesis, yet the molecular mechanism modulating alternative D2R pre-mRNA splicing has not been completely eluci

Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Article|31 citations·2018
Estrogen modulates serotonin effects on vasoconstriction through Src inhibition
Jae Gon Kim, Young-Eun Leem, Ilmin Kwon, Jong‐Sun Kang, Young Min Bae, Hana Cho
SJR Q1Experimental & Molecular MedicineOA

Estrogen has diverse effects on cardiovascular function, including regulation of the contractile response to vasoactive substances such as serotonin. The serotonin system recently emerged as an important player in the regulation of vascular tone in humans. However, hyperreactivity to serotonin appears to be a critical factor for the pathophysiology of hypertension. In this study, we examined the modulatory mechanisms of estrogen in serotonin-induced vasoconstriction by using a combinatory approa

Endocrinology, Diabetes and MetabolismMedicine

Research Areas

Molecular BiologyEndocrine and Autonomic SystemsNeurologyImmunologyCeramics and CompositesCellular and Molecular Neuroscience

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