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Jin‐Won Lee

Hanyang University · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Jin-Won Lee's research lab focuses on redox signaling and metalloprotein regulation in bacterial stress response, particularly the molecular mechanisms of peroxide sensing and gene regulation in Gram-positive bacteria. The lab investigates how transcriptional regulators such as PerR, OhrR, and Fur-family proteins use metal cofactors (Fe²⁺, Mn²⁺, Zn²⁺) and redox-sensitive cysteine residues to detect oxidative stress and control defense gene expression. Key research directions include the structural and functional characterization of redox-sensing domains, disulfide and sulfenic acid formation, and metal-dependent conformational changes in transcriptional regulators. The lab also explores the role of these regulatory systems in bacterial pathogenesis and antibiotic resistance, particularly in pathogens like *Staphylococcus aureus*.

redox regulationperoxide sensingmetalloproteinstranscriptional regulationbacterial stress response

Research Overview

Papers
115
Total Citations
3,185
Papers (5y)
17
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
17total
2021
2022
2023
2024
2025
Citations per year (5y)
179total
20212022202320242025

Selected Papers

15
1
Article|544 citations·2006
The PerR transcription factor senses H2O2 by metal-catalysed histidine oxidation
Jin‐Won Lee, John D. Helmann
SJR Q1Nature
GeneticsBiochemistry, Genetics and Molecular Biology
2
Review|431 citations·2007
Functional specialization within the Fur family of metalloregulators
Jin‐Won Lee, John D. Helmann
SJR Q1BioMetals
Nutrition and DieteticsNursing
3
Article|253 citations·2007
A complex thiolate switch regulates the Bacillus subtilis organic peroxide sensor OhrR
Jin‐Won Lee, Sumarin Soonsanga, John D. Helmann
SJR Q1Proceedings of the National Academy of SciencesOA

Oxidation of protein thiolates is central to numerous redox-regulated processes. Bacillus subtilis OhrR is an organic peroxide sensor that represses expression of an inducible peroxiredoxin, OhrA. Here, we present evidence that oxidation of the sole cysteine residue in OhrR leads to a sulfenic acid-containing intermediate that retains DNA-binding activity: further reaction to generate either a mixed disulfide (S-thiolation) or a protein sulfenamide (sulfenyl-amide) derivative is essential for de

Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Article|124 citations·2006
Biochemical Characterization of the Structural Zn2+ Site in the Bacillus subtilis Peroxide Sensor PerR
Jin‐Won Lee, John D. Helmann
SJR Q1Journal of Biological ChemistryOA

In Bacillus subtilis most peroxide-inducible oxidative stress genes are regulated by a metal-dependent repressor, PerR. PerR is a dimeric, Zn2+-containing metalloprotein with a regulatory metal-binding site that binds Fe2+ (PerR:Zn,Fe) or Mn2+ (PerR: Zn,Mn). Reaction of PerR:Zn,Fe with low levels of hydrogen peroxide (H2O2) leads to oxidation of two His residues thereby leading to derepression. When bound to Mn2+, the resulting PerR:Zn,Mn is much less sensitive to oxidative inactivation. Here we

Nutrition and DieteticsNursing
5
Article|63 citations·2015
Staphylococcus aureus PerR Is a Hypersensitive Hydrogen Peroxide Sensor using Iron-mediated Histidine Oxidation
Chang‐Jun Ji, Jung‐Hoon Kim, Young‐Bin Won, Yeh-Eun Lee, Tae-Woo Choi, Shinyeong Ju, Hwan Youn, John D. Helmann, Jin‐Won Lee
SJR Q1Journal of Biological ChemistryOA

In many Gram-positive bacteria PerR is a major peroxide sensor whose repressor activity is dependent on a bound metal cofactor. The prototype for PerR sensors, the Bacillus subtilis PerRBS protein, represses target genes when bound to either Mn(2+) or Fe(2+) as corepressor, but only the Fe(2+)-bound form responds to H2O2. The orthologous protein in the human pathogen Staphylococcus aureus, PerRSA, plays important roles in H2O2 resistance and virulence. However, PerRSA is reported to only respond

Molecular BiologyBiochemistry, Genetics and Molecular Biology
6
Article|48 citations·2010
Molecular cloning and characterization of peptidoglycan recognition proteins from the rockfish, Sebastes schlegeli
Min Young Kim, Ju Hye Jang, Jin‐Won Lee, Ju Hyun Cho
SJR Q1Fish & Shellfish Immunology
ImmunologyImmunology and Microbiology
7
Article|23 citations·2002
Nickel-containing superoxide dismutase
Jin‐Won Lee, Jung‐Hye Roe, Sa-Ouk Kang
SJR Q4Methods in enzymology on CD-ROM/Methods in enzymology
Inorganic ChemistryChemistry
8
Article|21 citations·2000
Identification of cis site involved in nickel-responsive transcriptional repression of sodF gene coding for Fe- and Zn-containing superoxide dismutase of Streptomyces griseus
Ju-Sim Kim, Ji-Hee Jang, Jin‐Won Lee, Jin‐Won Lee, Sa-Ouk Kang, Kun‐Soo Kim, Jeong K. Lee, Jeong K. Lee
Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression
Inorganic ChemistryChemistry
9
Article|19 citations·2015
Use of lactic acid bacteria as a biological agent against the cyanobacterium Anabaena flos-aquae
Yoon‐Ho Kang, Sukyung Kang, Chong-Sung Park, Jae-Hyung Joo, Jin‐Won Lee, Myung‐Soo Han
SJR Q2Journal of Applied Phycology
Food ScienceAgricultural and Biological Sciences
10
Article|18 citations·2010
Removal of biofilms using carbon dioxide aerosols
Min‐Yeong Kang, Hyun‐Woo Jeong, Jaeeun Kim, Jin‐Won Lee, Jaesung Jang
SJR Q1Journal of Aerosol Science
Molecular BiologyBiochemistry, Genetics and Molecular Biology
11
Article|12 citations·2016
Bacillus licheniformis Contains Two More PerR-Like Proteins in Addition to PerR, Fur, and Zur Orthologues
Jung‐Hoon Kim, Chang‐Jun Ji, Shinyeong Ju, Yoon-Mo Yang, Su-Hyun Ryu, Yumi Kwon, Young‐Bin Won, Yeh-Eun Lee, Hwan Youn, Jin‐Won Lee
SJR Q1PLoS ONEOA

The ferric uptake regulator (Fur) family proteins include sensors of Fe (Fur), Zn (Zur), and peroxide (PerR). Among Fur family proteins, Fur and Zur are ubiquitous in most prokaryotic organisms, whereas PerR exists mainly in Gram positive bacteria as a functional homologue of OxyR. Gram positive bacteria such as Bacillus subtilis, Listeria monocytogenes and Staphylococcus aureus encode three Fur family proteins: Fur, Zur, and PerR. In this study, we identified five Fur family proteins from B. li

GeneticsBiochemistry, Genetics and Molecular Biology
12
Article|11 citations·2007
Evidence that a wortmannin-sensitive signal transduction pathway regulates aflatoxin biosynthesis
Jin‐Won Lee, Ludmila V. Roze, John E. Linz
SJR Q1Mycologia

A signal transduction pathway involving cAMP and protein kinase A (PKA) regulates aflatoxin accumulation and nor-1 and ver-1 (aflatoxin structural genes) promoter function in Aspergillus parasiticus by modulating expression of a key transcriptional activator, AflR. To understand the function of this pathway in greater detail we treated A. parasiticus in culture with wortmannin, a frequently used probe of phosphatidyl inositol (PI)-3 kinase activity. A. parasiticus D8D3 (nor-1::GUS reporter) and

Molecular BiologyBiochemistry, Genetics and Molecular Biology
13
editorial|9 citations·2023
Bacterial Regulatory Mechanisms for the Control of Cellular Processes: Simple Organisms’ Complex Regulation
Jin‐Won Lee
SJR Q2The Journal of MicrobiologyOA
GeneticsBiochemistry, Genetics and Molecular Biology
14
Article|8 citations·2017
The difference in in vivo sensitivity between Bacillus licheniformis PerR and Bacillus subtilis PerR is due to the different cellular environments
Jung-Hoon Kim, Young-Bin Won, Chang-Jun Ji, Yoon-Mo Yang, Su-Hyun Ryu, Shinyeong Ju, Yumi Kwon, Yeh-Eun Lee, Jin‐Won Lee
SJR Q2Biochemical and Biophysical Research Communications
Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Article|7 citations·2018
Anti-σ factor YlaD regulates transcriptional activity of σ factor YlaC and sporulation via manganese-dependent redox-sensing molecular switch in Bacillus subtilis
Min‐Kyu Kwak, Han-Bong Ryu, Sung-Hyun Song, Jin‐Won Lee, Sa-Ouk Kang
SJR Q1Biochemical Journal

YlaD, a membrane-anchored anti-sigma (σ) factor of Bacillus subtilis, contains a HX3CXXC motif that functions as a redox-sensing domain and belongs to one of the zinc (Zn)-co-ordinated anti-σ factor families. Despite previously showing that the YlaC transcription is controlled by YlaD, experimental evidence of how the YlaC–YlaD interaction is affected by active cysteines and/or metal ions is lacking. Here, we showed that the Pyla promoter is autoregulated solely by YlaC. Moreover, reduced YlaD c

GeneticsBiochemistry, Genetics and Molecular Biology

Research Areas

Molecular BiologyMaterials ChemistryGeneticsInorganic ChemistryElectronic, Optical and Magnetic MaterialsNutrition and Dietetics

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