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Jong Hee Chae

Seoul National University · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Jong Hee Chae's research lab specializes in the genetic diagnosis and molecular characterization of rare neuromuscular and neurodevelopmental disorders, with a focus on leveraging next-generation sequencing (NGS) technologies to improve early and accurate diagnosis. The lab investigates the genetic architecture of conditions such as hereditary myopathies, Leigh syndrome, Duchenne muscular dystrophy, Rett syndrome, and epileptic encephalopathies, emphasizing the identification of pathogenic variants across nuclear and mitochondrial genomes. A key research direction involves developing innovative, single-platform NGS strategies for detecting diverse mutations, including large deletions/duplications and point mutations, while advancing noninvasive prenatal diagnosis for X-linked disorders through maternal haplotype phasing.

neuromuscular disordersnext-generation sequencinggenetic diagnosismitochondrial diseasesnoninvasive prenatal testing

Research Overview

Papers
442
Total Citations
7,429
Papers (5y)
104
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
104total
2022
2023
2024
2025
2026
Citations per year (5y)
523total
20222023202420252026

Selected Papers

15
1
Article|116 citations·2015
Utility of next generation sequencing in genetic diagnosis of early onset neuromuscular disorders
Jong‐Hee Chae, Valeria Vasta, Anna Cho, Byung Chan Lim, Qing Zhang, So Hee Eun, Si Houn Hahn
SJR Q1Journal of Medical GeneticsOA

BACKGROUND: Neuromuscular disorders are a clinically, pathologically, and genetically heterogeneous group. Even for the experienced clinician, an accurate diagnosis is often challenging due to the complexity of these disorders. Here, we investigated the utility of next generation sequencing (NGS) in early diagnostic algorithms to improve the diagnosis for patients currently lacking precise molecular characterisation, particularly for hereditary myopathies. METHODS: 43 patients presenting with ea

NeurologyMedicine
2
Article|110 citations·2001
Calpain 3 gene mutations: genetic and clinico-pathologic findings in limb-girdle muscular dystrophy
Jong‐Hee Chae, Narihiro Minami, Yuko Jin, Masahiro Nakagawa, Kumiko Murayama, Fumie Igarashi, Ikuya Nonaka
SJR Q1Neuromuscular Disorders
Cell BiologyBiochemistry, Genetics and Molecular Biology
3
Article|93 citations·2020
Genetic heterogeneity in Leigh syndrome: Highlighting treatable and novel genetic causes
Jin Sook Lee, Taekyeong Yoo, Moses Lee, Youngha Lee, Eunyoung Jeon, Soo Yeon Kim, Byung Chan Lim, Ki Joong Kim, Murim Choi, Jong‐Hee Chae
SJR Q2Clinical Genetics

Leigh syndrome (LS), the most common childhood mitochondrial disorder, has characteristic clinical and neuroradiologic features. Mutations in more than 75 genes have been identified in both the mitochondrial and nuclear genome, implicating a high degree of genetic heterogeneity in LS. To profile these genetic signatures and understand the pathophysiology of LS, we recruited 64 patients from 62 families who were clinically diagnosed with LS at Seoul National University Children's Hospital. Mitoch

Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
letter|88 citations·2016
Tofacitinib relieves symptoms of stimulator of interferon genes (STING)–associated vasculopathy with onset in infancy caused by 2 de novo variants in TMEM173
Jieun Seo, Jung-Ah Kang, Dong In Suh, Eun-Byeol Park, Chorong Lee, Sun Ah Choi, Soo Yeon Kim, Yeji Kim, Sang-Heon Park, Michael Ye, Soonhak Kwon, June Dong Park
SJR Q1Journal of Allergy and Clinical ImmunologyOA
ImmunologyImmunology and Microbiology
5
Article|87 citations·2011
Genetic diagnosis of Duchenne and Becker muscular dystrophy using next-generation sequencing technology: comprehensive mutational search in a single platform
Byung Chan Lim, Seungbok Lee, Jaeik Shin, Jong‐Il Kim, Hee Hwang, Kwang J. Kim, Yong Seung Hwang, Jeong‐Sun Seo, Jong‐Hee Chae
SJR Q1Journal of Medical GeneticsOA

BACKGROUND: Duchenne muscular dystrophy or Becker muscular dystrophy might be a suitable candidate disease for application of next-generation sequencing in the genetic diagnosis because the complex mutational spectrum and the large size of the dystrophin gene require two or more analytical methods and have a high cost. The authors tested whether large deletions/duplications or small mutations, such as point mutations or short insertions/deletions of the dystrophin gene, could be predicted accura

Molecular BiologyBiochemistry, Genetics and Molecular Biology
6
Article|85 citations·2017
GABBR2 mutations determine phenotype in rett syndrome and epileptic encephalopathy
Yongjin Yoo, Jane Jung, Yoo‐Na Lee, Youngha Lee, Hyosuk Cho, Eunjung Na, JeaYeok Hong, Eunjin Kim, Jin Sook Lee, Je‐Sang Lee, Chansik Hong, Sang‐Yoon Park
SJR Q1Annals of NeurologyOA

OBJECTIVE: Rett syndrome (RTT) and epileptic encephalopathy (EE) are devastating neurodevelopmental disorders with distinct diagnostic criteria. However, highly heterogeneous and overlapping clinical features often allocate patients into the boundary of the two conditions, complicating accurate diagnosis and appropriate medical interventions. Therefore, we investigated the specific molecular mechanism that allows an understanding of the pathogenesis and relationship of these two conditions. METH

GeneticsBiochemistry, Genetics and Molecular Biology
7
Article|75 citations·2001
Hemifacial Seizure of Cerebellar Ganglioglioma Origin: Seizure Control by Tumor Resection
Jong‐Hee Chae, Seung‐Ki Kim, Kyu‐Chang Wang, Ki Joong Kim, Yong‐Seung Hwang, Byung‐Kyu Cho
SJR Q1EpilepsiaOA

The cerebellum is known to have an inhibitory effect on seizures. Nevertheless, cerebellar dysplastic lesions can be epileptogenic. A 4-month-old infant had paroxysmal facial contractions; tachypnea and nystagmoid eyeball and tremulous movements were occasionally combined. These evolved to stereotypic clinical patterns and frequencies, which increased despite administration of antiepileptic drugs (AEDs). Magnetic resonance imaging (MRI) demonstrated a mass arising from the superior cerebellar pe

Psychiatry and Mental healthMedicine
8
Article|68 citations·2018
Targeted linked-read sequencing for direct haplotype phasing of maternal DMD alleles: a practical and reliable method for noninvasive prenatal diagnosis
Se Song Jang, Byung Chan Lim, Seong‐Keun Yoo, Jong-Yeon Shin, Ki Joong Kim, Jeong‐Sun Seo, Jong‐Il Kim, Jong‐Hee Chae
SJR Q1Scientific ReportsOA

For the noninvasive prenatal diagnosis (NIPD) of X-linked recessive diseases such as Duchenne muscular dystrophy (DMD), maternal haplotype phasing is a critical step for dosage analysis of the inherited allele. Until recently, the proband-based indirect haplotyping method has been preferred despite its limitations for use in clinical practice. Here, we describe a method for directly determining the maternal haplotype without requiring the proband's DNA in DMD families. We used targeted linked-re

Pediatrics, Perinatology and Child HealthMedicine
9
Article|66 citations·2015
Noninvasive Prenatal Diagnosis of Duchenne Muscular Dystrophy: Comprehensive Genetic Diagnosis in Carrier, Proband, and Fetus
Seong‐Keun Yoo, Byung Chan Lim, Jiyoung Byeun, Hee Hwang, Ki Joong Kim, Yong Seung Hwang, Joon Ho Lee, Joong Shin Park, Yong-Sun Lee, Junghyun Namkung, Jungsun Park, Seungbok Lee
SJR Q1Clinical ChemistryOA

BACKGROUND: Noninvasive prenatal diagnosis of monogenic disorders using maternal plasma and targeted massively parallel sequencing is being investigated actively. We previously demonstrated that comprehensive genetic diagnosis of a Duchenne muscular dystrophy (DMD) patient is feasible using a single targeted sequencing platform. Here we demonstrate the applicability of this approach to carrier detection and noninvasive prenatal diagnosis. METHODS: Custom solution-based target enrichment was desi

Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
Article|63 citations·2013
Distinct neurological features in a patient with Schinzel–Giedion syndrome caused by a recurrent SETBP1 mutation
Jung Min Ko, Byung Chan Lim, Ki Joong Kim, Yong Seung Hwang, Hye Won Ryu, Jung Ho Lee, Jon Su Kim, Jong‐Hee Chae
SJR Q2Child s Nervous System
Pediatrics, Perinatology and Child HealthMedicine
11
Article|58 citations·2016
GM3 synthase deficiency due to ST3GAL5 variants in two Korean female siblings: Masquerading as Rett syndrome‐like phenotype
Jin Sook Lee, Yongjin Yoo, Byung Chan Lim, Ki Joong Kim, Junghan Song, Murim Choi, Jong‐Hee Chae
SJR Q2American Journal of Medical Genetics Part A

There have been a few reports of GM3 synthase deficiency since the disease of the ganglioside biosynthetic pathway was first reported in 2004. It is characterized by infantile-onset epilepsy with severe intellectual disability, blindness, cutaneous dyspigmentation, and choreoathetosis. Here we report the cases of two Korean female siblings with ST3GAL5 variants, who presented with a Rett-like phenotype. They had delayed speech, hand stereotypies with a loss of purposeful hand movements, and chor

Molecular BiologyBiochemistry, Genetics and Molecular Biology
12
Article|51 citations·2015
Clinical applications of next‐generation sequencing‐based gene panel in patients with muscular dystrophy: Korean experience
Moon‐Woo Seong, Anna Cho, Hyunwoong Park, Soo Hyun Seo, Byung Chan Lim, Dong-soo Seol, S.I. Cho, Sung Sup Park, Jong‐Hee Chae
SJR Q2Clinical Genetics

Muscular dystrophy (MD) is a genetically and clinically heterogeneous group of disorders. Here, we performed targeted sequencing of 18 limb-girdle MD (LGMD)-related genes in 35 patients who were highly suspected of having MD. We identified one or more pathogenic variants in 23 of 35 patients (65.7%), and a genetic diagnosis was performed in 20 patients (57.1%). LGMD2B was the most common LGMD type, followed by LGMD1B, LGMD2A, and LGMD2G. Among the three major LGMD types in this group, LGMD1B was

Molecular BiologyBiochemistry, Genetics and Molecular Biology
13
Article|44 citations·2004
Clinical features of A3243G mitochondrial tRNA mutation
Jong‐Hee Chae, Hee Hwang, Byung Chan Lim, Hae Il Cheong, Yong Seung Hwang, Ki Joong Kim
SJR Q2Brain and Development
Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Article|40 citations·2014
Delayed posterior circulation insufficiency in pediatric moyamoya disease
Ji Yeoun Lee, Young Hun Choi, Jung‐Eun Cheon, Jin Chul Paeng, Hye Won Ryu, Ki Joong Kim, Ji Hoon Phi, Kyu‐Chang Wang, Byung-Kyu Cho, Jong‐Hee Chae, Seung‐Ki Kim
SJR Q1Journal of Neurology
RheumatologyMedicine
15
Article|40 citations·2011
Pantothenate kinase‐associated neurodegeneration in Korea: recurrent R440P mutation in PANK2 and outcome of deep brain stimulation
Byung Chan Lim, Chang‐Seok Ki, Anna Cho, Hee Hwang, K. J. Kim, Yong Seung Hwang, Y. E. Kim, Ji Young Yun, Beom S. Jeon, Yong‐beom Lim, Sun Ha Paek, Jong‐Hee Chae
SJR Q1European Journal of Neurology

BACKGROUND AND PURPOSE: The purpose of this study was to evaluate the mutation status of PANK2 among Korean patients with pantothenate kinase-associated neurodegeneration (PKAN) and to document the outcome of pallidal deep brain stimulation (DBS). METHODS: Direct sequencing and deletion/duplication analysis of PANK2 were conducted in 12 patients (11 unrelated) with PKAN, diagnosed on the basis of extrapyramidal dysfunction and the 'eye-of-the-tiger sign' on brain magnetic resonance imaging (MRI)

NeurologyNeuroscience

Research Areas

GeneticsMolecular BiologyPsychiatry and Mental healthNeurologyRheumatologyPhysiology

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