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Sangbeom Choi

Korea University · Medicine

About the Lab

Professor Sangbeom Choi's research lab specializes in biomedical data science and computational health, focusing on identifying genetic and environmental risk factors for complex diseases such as oral squamous cell carcinoma, rheumatoid arthritis, and autoimmune thyroid disease. The lab integrates statistical genetics, systems biology, and machine learning to uncover genetic susceptibility loci and gene-environment interactions, particularly in non-European populations. A key focus is on developing efficient, real-time computational models—such as for 3D human pose estimation—enabling clinical and public health applications on resource-limited platforms. The lab also conducts large-scale epidemiological studies to assess the impact of lifestyle factors like sleep duration on mortality and disease risk.

genetic susceptibilitybiomedical data sciencesurvival analysisepidemiologycomputational health

Research Overview

Papers
105
Total Citations
2,006
Papers (5y)
25
Primary Field
Medicine

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
25total
2022
2023
2024
2025
2026
Citations per year (5y)
64total
20222023202420252026

Selected Papers

15
1
Review|522 citations·2008
Molecular Pathogenesis of Oral Squamous Cell Carcinoma: Implications for Therapy
Sangbum Choi, Jeffrey N. Myers
SJR Q1Journal of Dental Research

The development of oral squamous cell carcinoma (OSCC) is a multistep process requiring the accumulation of multiple genetic alterations, influenced by a patient's genetic predisposition as well as by environmental influences, including tobacco, alcohol, chronic inflammation, and viral infection. Tumorigenic genetic alterations consist of two major types: tumor suppressor genes, which promote tumor development when inactivated; and oncogenes, which promote tumor development when activated. Tumor

Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Review|143 citations·2005
Genome scan meta-analysis of rheumatoid arthritis
Sangbum Choi, Y. H. Rho, Jong Dae Ji, Gwan Gyu Song, Young Ho Lee
SJR Q1Lara D. Veeken

This RA GSMA confirmed the evidence for HLA loci as the greatest susceptibility factor to RA and showed evidence for linkage at non-HLA loci, such as chromosomes 1p, 6, 8p, 12, 16 and 18q, across studies. These data may provide a basis to carry out targeted linkage and candidate gene studies, particularly in the regions.

RheumatologyMedicine
3
Article|54 citations·2021
MobileHumanPose: Toward real-time 3D human pose estimation in mobile devices
Sangbum Choi, Seokeon Choi, Changick Kim

Currently, 3D pose estimation methods are not compatible with a variety of low computational power devices because of efficiency and accuracy. In this paper, we revisit a pose estimation architecture from a viewpoint of both efficiency and accuracy. We propose a mobile-friendly model, MobileHumanPose, for real-time 3D human pose estimation from a single RGB image. This model consists of the modified MobileNetV2 backbone, a parametric activation function, and the skip concatenation inspired by U-

Computer Vision and Pattern RecognitionComputer Science
4
Article|27 citations·2020
Sleep duration and mortality in Korean adults: a population-based prospective cohort study
Sohyeon Kwon, Hyeyoung Lee, Jong-Tae Lee, Min-Jeong Shin, Sangbum Choi, Hannah Oh
SJR Q1BMC Public HealthOA

BACKGROUND: Increasing evidence suggests that sleep duration is associated with risks of various diseases including type 2 diabetes, cardiovascular disease (CVD), and certain types of cancer. However, the relationship with mortality is not clear, particularly in non-European populations. In this study, we investigated the association between sleep duration and mortality in a population-based prospective cohort of Korean adults. METHODS: This analysis included 34,264 participants (14,704 men and

Experimental and Cognitive PsychologyPsychology
5
Review|19 citations·2016
Association of Interleukin 10 Gene Polymorphisms with Autoimmune Thyroid Disease: Meta‐Analysis
Jae Hyun Jung, Gwan Gyu Song, Jae‐Hoon Kim, Sangbum Choi
SJR Q2Scandinavian Journal of ImmunologyOA

The aim of this study was to perform a meta-analysis of eligible studies and to derive a precise estimate of the association between interleukin 10 (IL10) polymorphisms and susceptibility to autoimmune thyroid disease (AITD). Meta-analyses were conducted on the associations between AITD and the -1082 G/A (rs1800896), -819 C/T (rs1800871) and -592 C/A (rs1800872) polymorphisms in IL10, and the haplotype of these polymorphisms and AITD. A total of 2903 AITD patients and 3060 controls in 10 eligibl

GeneticsBiochemistry, Genetics and Molecular Biology
6
Article|15 citations·2014
Maximum likelihood estimation of semiparametric mixture component models for competing risks data
Sangbum Choi, Xuelin Huang
SJR Q1Biometrics

In the analysis of competing risks data, the cumulative incidence function is a useful quantity to characterize the crude risk of failure from a specific event type. In this article, we consider an efficient semiparametric analysis of mixture component models on cumulative incidence functions. Under the proposed mixture model, latency survival regressions given the event type are performed through a class of semiparametric models that encompasses the proportional hazards model and the proportion

Statistics and ProbabilityMathematics
7
Article|13 citations·2017
Semiparametric accelerated failure time cure rate mixture models with competing risks
Sangbum Choi, Liang Zhu, Xuelin Huang
SJR Q1Statistics in Medicine

Modern medical treatments have substantially improved survival rates for many chronic diseases and have generated considerable interest in developing cure fraction models for survival data with a non-ignorable cured proportion. Statistical analysis of such data may be further complicated by competing risks that involve multiple types of endpoints. Regression analysis of competing risks is typically undertaken via a proportional hazards model adapted on cause-specific hazard or subdistribution ha

Statistics and ProbabilityMathematics
8
Article|12 citations·2018
Smoothed quantile regression analysis of competing risks
Sangbum Choi, Sangwook Kang, Xuelin Huang
SJR Q1Biometrical Journal

Abstract Censored quantile regression models, which offer great flexibility in assessing covariate effects on event times, have attracted considerable research interest. In this study, we consider flexible estimation and inference procedures for competing risks quantile regression, which not only provides meaningful interpretations by using cumulative incidence quantiles but also extends the conventional accelerated failure time model by relaxing some of the stringent model assumptions, such as

Statistics and ProbabilityMathematics
9
Article|11 citations·2021
A fast algorithm for the accelerated failure time model with high-dimensional time-to-event data
Taehwa Choi, Sangbum Choi
SJR Q2Journal of Statistical Computation and Simulation

We propose the logistic-kernel smoothing procedure for the semiparametric accelerated failure time (AFT) model with high-dimensional right-censored data. The resulting estimating procedure permits fast and accurate computation of regression parameter estimates and standard errors while preserving the same asymptotic properties as those from the non-smoothed rank estimating function. In addition, we provide an efficient numerical algorithm for obtaining a complete regularization path to facilitat

Statistics and ProbabilityMathematics
10
Article|11 citations·2014
A semiparametric inverse‐Gaussian model and inference for survival data with a cured proportion
Sangbum Choi, Xuelin Huang, Janice N. Cormier, Kjell A. Doksum
SJR Q2Canadian Journal of Statistics

Abstract This work focuses on a semiparametric analysis of a cure rate modelling approach based on a latent failure process. In clinical and epidemiological studies, a Wiener process with drift may represent a patient's health status and a clinical endpoint occurs when the process first reaches an adverse threshold state. The first‐hitting‐time then follows an inverse‐Gaussian distribution. On the basis of the improper inverse‐Gaussian distribution, we consider a process‐based lifetime model tha

Management Science and Operations ResearchDecision Sciences
11
Article|11 citations·2013
A class of semiparametric transformation models for survival data with a cured proportion
Sangbum Choi, Xuelin Huang, Yi‐Hau Chen
SJR Q2Lifetime Data Analysis
Statistics and ProbabilityMathematics
12
Article|10 citations·2018
Accelerated failure time models for the analysis of competing risks
Sangbum Choi, Hyunsoon Cho
SJR Q3Journal of the Korean Statistical Society
Economics and EconometricsEconomics, Econometrics and Finance
13
Article|10 citations·2015
Efficient semiparametric mixture inferences on cure rate models for competing risks
Sangbum Choi, Xuelin Huang, Janice N. Cormier
SJR Q2Canadian Journal of Statistics

Abstract Cancer patients may die from causes other than the diagnosed cancer. In a study of patients treated for soft tissue sarcoma, the patients may die from the disease or die without experiencing disease recurrence. In addition, a substantial proportion of the patients will remain cancer‐free after surgical resection of the tumour, and therefore will not be at increased risk of any type of failure. Our goal is to describe the effect of adjuvant chemotherapy simultaneously on the probabilitie

Management Science and Operations ResearchDecision Sciences
14
Article|10 citations·2021
Semiparametric least-squares regression with doubly-censored data
Taehwa Choi, Arlene K. H. Kim, Sangbum Choi
SJR Q1Computational Statistics & Data Analysis
Statistics and ProbabilityMathematics
15
Article|10 citations·2012
A General Class of Semiparametric Transformation Frailty Models for Nonproportional Hazards Survival Data
Sangbum Choi, Xuelin Huang
SJR Q1BiometricsOA

We propose a semiparametrically efficient estimation of a broad class of transformation regression models for nonproportional hazards data. Classical transformation models are to be viewed from a frailty model paradigm, and the proposed method provides a unified approach that is valid for both continuous and discrete frailty models. The proposed models are shown to be flexible enough to model long-term follow-up survival data when the treatment effect diminishes over time, a case for which the P

Statistics and ProbabilityMathematics

Research Areas

Statistics and ProbabilityHematologyRheumatologyPulmonary and Respiratory MedicineMolecular BiologyPathology and Forensic Medicine

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