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Young Kyun Lee

Seoul National University · Biochemistry, Genetics and Molecular Biology

About the Lab

Professor Young Kyun Lee's research lab focuses on the molecular and cellular mechanisms underlying bone metabolism and immune regulation, with a particular emphasis on osteoclastogenesis, inflammatory bone diseases such as periodontitis and rheumatoid arthritis, and the role of key signaling molecules like IL-17, DYRK1A, Jak1, and complement components. The lab integrates molecular biology, immunology, and translational approaches to uncover novel therapeutic targets for bone loss disorders. Recent work highlights the dual roles of immune mediators in skeletal homeostasis and the potential of natural compounds like 6-shogaol as anti-resorptive agents.

osteoclastogenesisbone homeostasisinflammatory bone diseaseimmune regulationsignaling molecules

Research Overview

Papers
152
Total Citations
3,428
Papers (5y)
22
Primary Field
Biochemistry, Genetics and Molecular Biology

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
22total
2022
2023
2024
2025
2026
Citations per year (5y)
202total
20222023202420252026

Selected Papers

15
1
Article|162 citations·2006
Induction of c-Fos and NFATc1 during RANKL-stimulated osteoclast differentiation is mediated by the p38 signaling pathway
Hao Huang, Eun-Ju Chang, Ji‐Yoon Ryu, Zang Hee Lee, Youngkyun Lee, Hong‐Hee Kim
SJR Q2Biochemical and Biophysical Research Communications
Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|156 citations·2013
MicroRNA-124 regulates osteoclast differentiation
Youngkyun Lee, Hyo Jeong Kim, Hyo Jeong Kim, Cheol‐Kyu Park, Yong‐Gun Kim, Heon‐Jin Lee, Jae‐Young Kim, Hong‐Hee Kim, Hong‐Hee Kim
SJR Q1Bone
Cancer ResearchBiochemistry, Genetics and Molecular Biology
3
Review|107 citations·2013
The role of interleukin-17 in bone metabolism and inflammatory skeletal diseases
Youngkyun Lee
SJR Q1BMB ReportsOA

The balance between osteoblast-dependent bone formation and osteoclast-dependent bone resorption maintains bone homeostasis. In inflammatory conditions, this balance shifts toward bone resorption, causing osteolytic bone lesions observed in rheumatoid arthritis and periodontitis. A recently discovered family of cytokine IL-17 is widely reported to mediate diverse inflammatory processes. During the last decade, novel roles for IL-17 in skeletal homeostasis have been discovered indicating the pote

ImmunologyImmunology and Microbiology
4
Article|80 citations·2009
Negative Feedback Inhibition of NFATc1 by DYRK1A Regulates Bone Homeostasis
Youngkyun Lee, Jeongim Ha, Hyung Joon Kim, Yeun‐Soo Kim, Eun‐Ju Chang, Woo‐Joo Song, Hong‐Hee Kim, Hong‐Hee Kim, Hong‐Hee Kim
SJR Q1Journal of Biological ChemistryOA

DYRK1A is a serine/threonine kinase that has been linked to mental retardation associated with Down syndrome. In the present report, we describe a previously unknown role for DYRK1A in bone homeostasis. The protein expression of DYRK1A increased during osteoclast differentiation. In vitro studies in osteoclasts revealed that DYRK1A inhibited osteoclastogenesis. Whereas DYRK1A phosphorylated and inhibited the osteoclastogenic transcription factor NFATc1, forced expression of NFATc1 induced DYRK1A

Public Health, Environmental and Occupational HealthMedicine
5
Article|54 citations·2016
Transcriptome sequencing of gingival biopsies from chronic periodontitis patients reveals novel gene expression and splicing patterns
Yong‐Gun Kim, Min-Jung Kim, Ji Hyun Kang, Hyo Jeong Kim, Jin-Woo Park, Jae‐Mok Lee, Jo‐Young Suh, Jae‐Young Kim, Jae‐Hyung Lee, Youngkyun Lee
SJR Q1Human GenomicsOA

BACKGROUND: Periodontitis is the most common chronic inflammatory disease caused by complex interaction between the microbial biofilm and host immune responses. In the present study, high-throughput RNA sequencing was utilized to systemically and precisely identify gene expression profiles and alternative splicing. METHODS: The pooled RNAs of 10 gingival tissues from both healthy and periodontitis patients were analyzed by deep sequencing followed by computational annotation and quantification o

PeriodonticsDentistry
6
Article|51 citations·2020
IL-17 promotes osteoblast differentiation, bone regeneration, and remodeling in mice
Hyo Jeong Kim, Seung Jun Seo, Jae‐Young Kim, Yong‐Gun Kim, Youngkyun Lee
SJR Q2Biochemical and Biophysical Research Communications
Molecular BiologyBiochemistry, Genetics and Molecular Biology
7
Article|51 citations·2005
Complement Component C3d-Antigen Complexes Can Either Augment or Inhibit B Lymphocyte Activation and Humoral Immunity in Mice Depending on the Degree of CD21/CD19 Complex Engagement
Youngkyun Lee, Karen M. Haas, Dennis O. Gor, Xuedong Ding, David R. Karp, Neil S. Greenspan, Jonathan C. Poe, Thomas F. Tedder
SJR Q1The Journal of ImmunologyOA

C3d can function as a molecular adjuvant by binding CD21 and thereby enhancing B cell activation and humoral immune responses. However, recent studies suggest both positive and negative roles for C3d and the CD19/CD21 signaling complex in regulating humoral immunity. To address whether signaling through the CD19/CD21 complex can negatively regulate B cell function when engaged by physiological ligands, diphtheria toxin (DT)-C3d fusion protein and C3dg-streptavidin (SA) complexes were used to ass

ImmunologyImmunology and Microbiology
8
Article|46 citations·2007
The ubiquitin-mediated degradation of Jak1 modulates osteoclastogenesis by limiting interferon-β–induced inhibitory signaling
Youngkyun Lee, Seok‐Won Hyung, Hee Jung Jung, Hyung Joon Kim, Judith Staerk, Stefan N. Constantinescu, Eun‐Ju Chang, Zang Hee Lee, Sang‐Won Lee, Hong‐Hee Kim
SJR Q1BloodOA

Interferons (IFNs) have been shown to negatively regulate osteoclastogenesis. In a proteomic study to assess protein expression during osteoclastogenesis, we discovered that the expression level of Jak1 was significantly decreased during the early stage of osteoclast differentiation from mouse bone marrow macrophages (BMMs) upon stimulation with receptor activator of nuclear factor kappaB ligand (RANKL). RANKL induced Jak1 ubiquitination, and a proteasome inhibitor MG132 efficiently blocked the

Molecular BiologyBiochemistry, Genetics and Molecular Biology
9
Article|40 citations·2019
6‐Shogaol, an active ingredient of ginger, inhibits osteoclastogenesis and alveolar bone resorption in ligature‐induced periodontitis in mice
Yong‐Gun Kim, Myoung Ok Kim, Sunghyun Kim, Hyo Jeong Kim, Nitin Kumar Pokhrel, Ji Hye Lee, Heon‐Jin Lee, Jae‐Young Kim, Youngkyun Lee
SJR Q1Journal of Periodontology

Abstract Background Periodontitis is an inflammatory disease of the tissues surrounding teeth that causes destruction of connective tissues. During the progress of periodontitis, osteoclasts are solely accountable for the resorption of alveolar bones that leads to the loss of teeth if not properly treated. Thus, the development of effective anti‐resorptive therapies will greatly benefit the treatment of periodontitis patients. In the present study, we suggest an inhibitory effect of 6‐shogaol, a

PharmacologyPharmacology, Toxicology and Pharmaceutics
10
Article|32 citations·2023
Periodontitis promotes bacterial extracellular vesicle-induced neuroinflammation in the brain and trigeminal ganglion
Jae Yeong Ha, Jiwon Seok, Suk‐Jeong Kim, Hye-Jin Jung, Ka‐Young Ryu, Michiko Nakamura, Il‐Sung Jang, Su‐Hyung Hong, Youngkyun Lee, Heon‐Jin Lee
SJR Q1PLoS PathogensOA

Gram-negative bacteria derived extracellular vesicles (EVs), also known as outer membrane vesicles, have attracted significant attention due to their pathogenic roles in various inflammatory diseases. We recently demonstrated that EVs secreted by the periodontopathogen Aggregatibacter actinomycetemcomitans (Aa) can cross the blood-brain barrier (BBB) and that their extracellular RNA cargo can promote the secretion of proinflammatory cytokines, such as IL-6 and TNF-α, in the brain. To gain more i

MicrobiologyImmunology and Microbiology
11
Article|32 citations·2015
Serotonin Inhibits Osteoblast Differentiation and Bone Regeneration in Rats
Soon‐Shin Nam, Jeong Cheol Lee, Hyo Jeong Kim, Jin‐Woo Park, Jae‐Mok Lee, Jo‐Young Suh, Heung‐Sik Um, Jae‐Young Kim, Youngkyun Lee, Yong‐Gun Kim
SJR Q1Journal of Periodontology

BACKGROUND: Although increasing evidence indicates that serotonin (SER; 5-hydroxytrypamine [5-HT]) is involved in the regulation of bone metabolism, conflicting data exist regarding whether SER promotes or inhibits osteoblast differentiation and bone formation. Regeneration of functional bone is required for proper osseointegration of dental implants. Noticeably, the use of selective SER reuptake inhibitors was recently associated with the failure of osseointegrated dental implants. The present

Cellular and Molecular NeuroscienceNeuroscience
12
Article|28 citations·2010
Proteomic analysis of osteoclast lipid rafts: the role of the integrity of lipid rafts on V-ATPase activity in osteoclasts
Jiyoon Ryu, Hyunsoo Kim, Eun‐Ju Chang, Hyung Joon Kim, Youngkyun Lee, Hong‐Hee Kim, Youngkyun Lee, Hong‐Hee Kim, Hong‐Hee Kim
SJR Q2Journal of Bone and Mineral Metabolism
Molecular BiologyBiochemistry, Genetics and Molecular Biology
13
Article|25 citations·2016
Effect of diluted colloidal silica slurry mixed with ceria abrasives on CMP characteristic
Youngkyun Lee, Yong‐Jin Seo, Joo‐Ho Lee, Haedo Jeong
SJR Q1International Journal of Precision Engineering and Manufacturing-Green Technology
Biomedical EngineeringEngineering
14
Article|14 citations·2017
Bortezomib prevents ovariectomy-induced osteoporosis in mice by inhibiting osteoclast differentiation
Sung‐Hyun Kim, Myoung Ok Kim, Hyo Jeong Kim, Sanjiv Neupane, Hyung Joon Kim, Jihye Lee, Hong‐Hee Kim, Jae‐Young Kim, Youngkyun Lee
SJR Q2Journal of Bone and Mineral Metabolism
Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Article|14 citations·2016
Fluvastatin Inhibits Osteoclast Differentiation and Porphyromonas gingivalis Lipopolysaccharide‐Induced Alveolar Bone Erosion in Mice
Nitin Kumar Pokhrel, Yong‐Gun Kim, Jae‐Young Kim, Hong‐Hee Kim, Youngkyun Lee
SJR Q1Journal of Periodontology

BACKGROUND: Statins have been widely used to treat hypercholesterolemia. In addition to inhibition of cholesterol synthesis, recent reports suggest a bone anabolic property of statins. However, little notice has been paid to the direct effect of statins on osteoclastogenesis and bone resorption. METHODS: The effect of fluvastatin on osteoclast differentiation was determined using in vitro culture of mouse bone marrow macrophages (BMMs) in the presence of macrophage colony-stimulating factor and

Molecular BiologyBiochemistry, Genetics and Molecular Biology

Research Areas

Molecular BiologyBiomedical EngineeringPharmacyCell BiologyImmunologyPeriodontics

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