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Ja-Eun Kim

Kyung Hee University · 生化学・遺伝学・分子生物学

研究室紹介

Professor Ja-Eun Kim's research lab focuses on epigenetic regulation and cell cycle control in cancer biology, with a particular emphasis on histone modifications, chromatin dynamics, and signaling pathways governing cell proliferation, genomic stability, and tumorigenesis. The lab investigates key regulators such as DOT1L, TopBP1, and SIRT1/DBC1 in maintaining genomic integrity and their roles in cancer progression. Current research directions include the epigenetic mechanisms underlying chromosomal instability, cytokinesis regulation via Ect2, and the therapeutic targeting of oncogenic transcription factors like STAT3 in breast cancer.

epigeneticschromosomal instabilitycancer cell cycleSTAT3 signalingDOT1L

Research Overview

Papers
101
Total Citations
5,584
Papers (5y)
21
Primary Field
生化学・遺伝学・分子生物学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
21total
2022
2023
2024
2025
2026
Citations per year (5y)
44total
20222023202420252026

Selected Papers

15
1
Article|762 citations·2010
Sirtuin 1 Modulates Cellular Responses to Hypoxia by Deacetylating Hypoxia-Inducible Factor 1α
Ji‐Hong Lim, Yoon-Mi Lee, Yang‐Sook Chun, Junjie Chen, Ja‐Eun Kim, Jong‐Wan Park
SJR Q1Molecular CellOA
Cancer ResearchBiochemistry, Genetics and Molecular Biology
2
Article|500 citations·2008
DBC1 is a negative regulator of SIRT1
Ja‐Eun Kim, Junjie Chen, Zhenkun Lou
SJR Q1Nature
Geriatrics and GerontologyMedicine
3
Article|144 citations·2011
Deficiency of H3K79 Histone Methyltransferase Dot1-like Protein (DOT1L) Inhibits Cell Proliferation
Wootae Kim, Ranah Kim, Geunyeong Park, Jong‐Wan Park, Ja‐Eun Kim
SJR Q1Journal of Biological ChemistryOA

Dot1-like protein (DOT1L) is an evolutionarily conserved histone methyltransferase that methylates lysine 79 of histone H3 (H3K79). Mammalian DOT1L participates in the regulation of transcription, development, erythropoiesis, differentiation, and proliferation of normal cells. However, the role of DOT1L in cancer cell proliferation has not been fully elucidated. DOT1L siRNA-transfected A549 or NCI-H1299 lung cancer cells displayed a nonproliferating multinucleated phenotype. DOT1L-deficient cell

Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Review|115 citations·2014
The histone methyltransferase Dot1/DOT1L as a critical regulator of the cell cycle
Wootae Kim, Minji Choi, Ja‐Eun Kim
SJR Q1Cell CycleOA

Dot1/DOT1L catalyzes the methylation of histone H3 lysine 79 (H3K79), which regulates diverse cellular processes, such as development, reprogramming, differentiation, and proliferation. In regards to these processes, studies of Dot1/DOT1L-dependent H3K79 methylation have mainly focused on the transcriptional regulation of specific genes. Although the gene transcription mediated by Dot1/DOT1L during the cell cycle is not fully understood, H3K79 methylation plays a critical role in the progression

Molecular BiologyBiochemistry, Genetics and Molecular Biology
5
Article|106 citations·2004
The Tandem BRCT Domains of Ect2 Are Required for Both Negative and Positive Regulation of Ect2 in Cytokinesis
Ja‐Eun Kim, Daniel D. Billadeau, Junjie Chen
SJR Q1Journal of Biological ChemistryOA

Epithelial cell transforming protein 2 (Ect2) is a guanine nucleotide exchange factor (GEF) for Rho GTPases, molecular switches essential for the control of cytokinesis in mammalian cells. Aside from the canonical Dbl homology/pleckstrin homology cassette found in virtually all Dbl family members, Ect2 contains N-terminal tandem BRCT domains. In this study, we address the role of the Ect2 BRCT domains in the regulation of Ect2 activity and cytokinesis. First, we show that the depletion of endoge

Cell BiologyBiochemistry, Genetics and Molecular Biology
6
Article|73 citations·2010
Balance between SIRT1 and DBC1 expression is lost in breast cancer
Ji‐Youn Sung, Ranah Kim, Ja‐Eun Kim, Juhie Lee
SJR Q1Cancer ScienceOA

SIRT1 (silent mating-type information regulation 2 homologue 1)-mediated cellular resistance to various stresses is negatively regulated by deleted in breast cancer 1 (DBC1), which was originally reported to be deleted in breast cancer. However, the suggested functions of SIRT1 as a potential tumor promoter and of DBC1 as a potential tumor suppressor have been challenged by observations of their respective down- and up-regulation in various cancers. The aim of the present study was to simultaneo

Geriatrics and GerontologyMedicine
7
Article|70 citations·2005
Human TopBP1 Ensures Genome Integrity during Normal S Phase
Ja‐Eun Kim, Sarah McAvoy, Jeremy C. Smith, Junjie Chen
SJR Q2Molecular and Cellular BiologyOA

Cell cycle checkpoints are essential for maintaining genomic integrity. Human topoisomerase II binding protein 1 (TopBP1) shares sequence similarity with budding yeast Dpb11, fission yeast Rad4/Cut5, and Xenopus Cut5, all of which are required for DNA replication and cell cycle checkpoints. Indeed, we have shown that human TopBP1 participates in the activation of replication checkpoint and DNA damage checkpoints, following hydroxyurea treatment and ionizing radiation. In this study, we address t

Molecular BiologyBiochemistry, Genetics and Molecular Biology
8
Article|60 citations·2008
LYR71, a derivative of trimeric resveratrol, inhibits tumorigenesis by blocking STAT3-mediated matrix metalloproteinase 9 expression
Ja‐Eun Kim, Hong Sook Kim, Yong‐Jae Shin, Chang Seok Lee, Cheolhee Won, Sin-Ae Lee, Sang Eun Lee, Youngsoo Kim, Jae‐Seung Kang, Sang‐Kyu Ye, Myung-Hee Chung
SJR Q1Experimental & Molecular MedicineOA

Tumor migration/invasion is the main cause of tumor progression and STAT3 is needed to enhance tumor migration/invasion by up-regulating MMP-9. Thus, agents that inhibit STAT3 activation may be used as an anticancer drug. We present herein that 6-methyl-2-propylimino-6, 7-dihydro-5H-benzo [1, 3]-oxathiol- 4-one (LYR71) , a derivative of trimeric resveratrol, has an anticancer activity through inhibition of STAT3 activation. We found that LYR71 suppressed STAT3 activation and inhibited the expres

OncologyMedicine
9
Article|60 citations·2010
Characterization of the DOT1L Network: Implications of Diverse Roles for DOT1L
Geunyeong Park, Zihua Gong, Junjie Chen, Ja‐Eun Kim
SJR Q3The Protein Journal
Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
Article|51 citations·2018
Zingerone Suppresses Tumor Development through Decreasing Cyclin D1 Expression and Inducing Mitotic Arrest
Jae‐Sun Choi, Jaewook Ryu, Woom‐Yee Bae, Aron Park, Seungyoon Nam, Ja‐Eun Kim, Joo‐Won Jeong
SJR Q1International Journal of Molecular SciencesOA

Cancer cells undergo uncontrolled proliferation resulting from aberrant activity of various cell-cycle proteins. Therefore, despite recent advances in intensive chemotherapy, it is difficult to cure cancer completely. Recently, cell-cycle regulators became attractive targets in cancer therapy. Zingerone, a phenolic compound isolated from ginger, is a nontoxic and inexpensive compound with varied pharmacological activities. In this study, the therapeutic effect of zingerone as an anti-mitotic age

PharmacologyPharmacology, Toxicology and Pharmaceutics
11
Article|47 citations·2017
TC Mps1 12, a novel Mps1 inhibitor, suppresses the growth of hepatocellular carcinoma cells via the accumulation of chromosomal instability
Minji Choi, Yoo Hong Min, Jaehyuk Pyo, Chang‐Woo Lee, Chang‐Young Jang, Ja‐Eun Kim
SJR Q1British Journal of PharmacologyOA

BACKGROUND AND PURPOSE: Chromosomal instability is not only a hallmark of cancer but also an attractive therapeutic target. A diverse set of mitotic kinases maintains chromosomal stability. One of these is monopolar spindle 1 (Mps1, also known as TTK), which is essential for chromosome alignment and for the spindle assembly checkpoint (SAC). Pharmacological inhibition of Mps1 has been suggested as a cancer therapeutic; however, despite the existence of a novel Mps1 inhibitor, TC Mps1 12, no such

Cell BiologyBiochemistry, Genetics and Molecular Biology
12
Article|47 citations·2015
Mechanism for enhanced 5-aminolevulinic acid fluorescence in isocitrate dehydrogenase 1 mutant malignant gliomas
Ja‐Eun Kim, Hye Rim Cho, Wen Jun Xu, Ji-Young Kim, Min‐Sung Kim, Seung‐Ki Kim, Sung‐Hye Park, Hyeonjin Kim, Se‐Hoon Lee, Seung Hong Choi, Sunghyouk Park, Chul‐Kee Park
SJR Q2OncotargetOA

Fluorescence-guided surgery using 5-aminolevulinic acid (5-ALA) has become the main treatment modality in malignant gliomas. However unlike glioblastomas, there are inconsistent result about fluorescence status in WHO grade III gliomas. Here, we show that mutational status of IDH1 is linked to 5-ALA fluorescence. Using genetically engineered malignant glioma cells harboring wild type (U87MG-IDH1WT) or mutant (U87MG-IDH1R132H) IDH1, we demonstrated a lag in 5-ALA metabolism and accumulation of pr

Biomedical EngineeringEngineering
13
Article|44 citations·2003
8‐Oxoguanine induces intramolecular DNA damage but free 8‐oxoguanine protects intermolecular DNA from oxidative stress
Ja‐Eun Kim, Seongwon Choi, Ju-Ah Yoo, Myung‐Hee Chung
SJR Q1FEBS Letters

7,8-Dihydro-8-oxoguanine (8-oxoguanine; 8-oxo-G), one of the major oxidative DNA adducts, is highly susceptible to further oxidation by radicals. We confirmed the higher reactivity of 8-oxo-G toward reactive oxygen (singlet oxygen and hydroxyl radical) or nitrogen (peroxynitrite) species as compared to unmodified base. In this study, we raised the question about the effect of this high reactivity toward radicals on intramolecular and intermolecular DNA damage. We found that the amount of intact

Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Review|40 citations·2006
Signaling networks controlled by the MRN complex and MDC1 during early DNA damage responses
Ja‐Eun Kim, Katherine Minter‐Dykhouse, Junjie Chen
SJR Q2Molecular Carcinogenesis

Cells activate complex signaling networks in response to DNA damage. Several proteins and protein complexes are involved in sensing DNA lesions and initiating the DNA damage response networks. The subsequent DNA damage responses, including the initiation of DNA repair pathways, the activation of cell cycle checkpoint controls and the induction of apoptosis, help maintain genomic stability in mammalian systems. Failure to establish the appropriate DNA damage signaling networks results in genomic

Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Review|38 citations·2009
p30 DBC is a potential regulator of tumorigenesis
Ja‐Eun Kim, Junjie Chen, Zhenkun Lou
SJR Q1Cell CycleOA

Tumorigenesis is a multistep process controlled by a number of proteins involved in diverse pathways. Traditionally, proteins are either considered as oncogenes, which promote tumorigenesis or as tumor suppressors, which prevent tumorigenesis. However, recent studies revealed quite a few proteins that could function as oncogene as well as tumor suppressor. A new member of such proteins is p30 DBC (deleted in breast cancer 1, also called DBC1). p30 DBC is one of the proteins involved in tumorigen

Geriatrics and GerontologyMedicine

Research Areas

Molecular BiologyGeriatrics and GerontologyCell BiologyCancer ResearchOncologyGenetics

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