Jaechul Lim
Seoul National University · 生化学・遺伝学・分子生物学
研究室紹介
Professor Jaechul Lim's research lab focuses on post-transcriptional gene regulation, particularly the role of RNA modifications and mRNA tail dynamics in cellular homeostasis and disease. The lab investigates how polyadenylation, deadenylation, and guanylation of mRNA tails control mRNA stability, translation, and immune cell function. Key research directions include the molecular mechanisms of T cell quiescence, the regulation of maternal mRNA in early development, and the transfer of immune cell membrane proteins to cancer cells via trogocytosis, contributing to immunosuppression in tumors. The lab also explores the lipid-binding properties of adiponectin and related C1q/TNF-related proteins, linking metabolism and immunity.
Research Overview
Research Output Trend
Figures are computed from collected data and may differ slightly.
Selected Papers
15T cells maintain a quiescent state prior to activation. As inappropriate T cell activation can cause disease, T cell quiescence must be preserved. Despite its importance, the mechanisms underlying the "quiescent state" remain elusive. Here, we identify BTG1 and BTG2 (BTG1/2) as factors responsible for T cell quiescence. BTG1/2-deficient T cells show an increased proliferation and spontaneous activation due to a global increase in messenger RNA (mRNA) abundance, which reduces the threshold to act
Eukaryotic mRNAs are subject to multiple types of tailing that critically influence mRNA stability and translatability. To investigate RNA tails at the genomic scale, we previously developed TAIL-seq, but its low sensitivity precluded its application to biological materials of minute quantity. In this study, we report a new version of TAIL-seq (mRNA TAIL-seq [mTAIL-seq]) with enhanced sequencing depth for mRNAs (by ∼1000-fold compared with the previous version). The improved method allows us to
RNA tails play integral roles in the regulation of messenger RNA (mRNA) translation and decay. Guanylation of the poly(A) tail was discovered recently, yet the enzymology and function remain obscure. Here we identify TENT4A (PAPD7) and TENT4B (PAPD5) as the enzymes responsible for mRNA guanylation. Purified TENT4 proteins generate a mixed poly(A) tail with intermittent non-adenosine residues, the most common of which is guanosine. A single guanosine residue is sufficient to impede the deadenylas
The intestine is a site of direct encounter with the external environment and must consequently balance barrier defense with nutrient uptake. To investigate how nutrient uptake is regulated in the small intestine, we tested the effect of diets with different macronutrient compositions on epithelial gene expression. We found that enzymes and transporters required for carbohydrate digestion and absorption were regulated by carbohydrate availability. The "on-demand" induction of this machinery requ
Significance We have identified the presence of cancer cells harboring immune cell–specific surface marker proteins such as CD4 in the tumor microenvironment. Cancer cells acquired not only the T cell marker protein CD4 but also immune regulatory molecules such as CTLA4 by trogocytosis. Unlike other endocytic mechanisms, trogocytosis maintains the cellular localization and functions of the transferred membrane proteins. Therefore, trogocytic transfer of immune regulatory molecules enhances the i