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Ki‐Jun Yoon

Korea Advanced Institute of Science and Technology · 生化学・遺伝学・分子生物学

研究室紹介

Professor Ki-Jun Yoon's research lab focuses on the molecular mechanisms underlying Notch signaling in development and neurodegeneration, with a particular emphasis on the role of E3 ubiquitin ligases such as Mib1 in regulating intercellular communication. The lab investigates how ubiquitin ligases control Notch pathway activation through ligand endocytosis, exploring their functions in embryonic development, neural stem cell differentiation, and adult brain function. Additionally, the lab examines nucleocytoplasmic transport defects in neurodegenerative diseases, identifying endogenous protective pathways that counteract pathological protein aggregates. Their work bridges developmental biology, neurobiology, and molecular pathology using genetic, cell biological, and biochemical approaches in mouse models and human cell systems.

Notch signalingMib1neurodegenerationnucleocytoplasmic transportepitranscriptomics

Research Overview

Papers
98
Total Citations
6,143
Papers (5y)
52
Primary Field
生化学・遺伝学・分子生物学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
52total
2022
2023
2024
2025
2026
Citations per year (5y)
461total
20222023202420252026

Selected Papers

15
1
Article|2,153 citations·2016
Brain-Region-Specific Organoids Using Mini-bioreactors for Modeling ZIKV Exposure
Xuyu Qian, Ha Nam Nguyen, Mingxi M. Song, Christopher Hadiono, Sarah C. Ogden, Christy Hammack, Bing Yao, Gregory R. Hamersky, Fadi Jacob, Chun Zhong, Ki‐Jun Yoon, William J. Jeang
SJR Q1CellOA
Public Health, Environmental and Occupational HealthMedicine
2
Article|775 citations·2017
Temporal Control of Mammalian Cortical Neurogenesis by m6A Methylation
Ki‐Jun Yoon, Francisca Rojas Ringeling, Caroline Vissers, Fadi Jacob, Michael Pokrass, Dennisse Jimenez-Cyrus, Yijing Su, Nam-Shik Kim, Yunhua Zhu, Lily Zheng, Sunghan Kim, Xinyuan Wang
SJR Q1CellOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
Article|568 citations·2014
Synaptic dysregulation in a human iPS cell model of mental disorders
Zhexing Wen, Ha Nam Nguyen, Ziyuan Guo, Matthew A. Lalli, Xinyuan Wang, Yijing Su, Nam-Shik Kim, Ki‐Jun Yoon, Jaehoon Shin, Ce Zhang, Georgia Makri, David W. Nauen
SJR Q1Nature
Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Article|254 citations·2014
Modeling a Genetic Risk for Schizophrenia in iPSCs and Mice Reveals Neural Stem Cell Deficits Associated with Adherens Junctions and Polarity
Ki‐Jun Yoon, Ha Nam Nguyen, Gianluca Ursini, Fengyu Zhang, Nam-Shik Kim, Zhexing Wen, Georgia Makri, David W. Nauen, Joo Heon Shin, Youngbin Park, Raeeun Chung, Eva Pekle
SJR Q1Cell stem cellOA
GeneticsBiochemistry, Genetics and Molecular Biology
5
Article|247 citations·2005
Mind bomb 1 is essential for generating functional Notch ligands to activate Notch
Bon‐Kyoung Koo, Hyoung–Soo Lim, Ran Song, Mi-Jeong Yoon, Ki‐Jun Yoon, Jin-Sook Moon, Young-Woong Kim, Min‐Chul Kwon, Kyeong-Won Yoo, Myung-Phil Kong, Jinie Lee, Ajay Chitnis
SJR Q1Development

The Delta-Notch signaling pathway is an evolutionarily conserved intercellular signaling mechanism essential for cell fate specification. Mind bomb 1 (Mib1) has been identified as a ubiquitin ligase that promotes the endocytosis of Delta. We now report that mice lacking Mib1 die prior to embryonic day 11.5, with pan-Notch defects in somitogenesis, neurogenesis, vasculogenesis and cardiogenesis. The Mib1-/- embryos exhibit reduced expression of Notch target genes Hes5, Hey1, Hey2 and Heyl, with t

Molecular BiologyBiochemistry, Genetics and Molecular Biology
6
Article|214 citations·2017
Zika-Virus-Encoded NS2A Disrupts Mammalian Cortical Neurogenesis by Degrading Adherens Junction Proteins
Ki‐Jun Yoon, Guang Song, Xuyu Qian, Jianbo Pan, Dan Xu, Hee-Sool Rho, Nam-Shik Kim, Christa W. Habela, Lily Zheng, Fadi Jacob, Feiran Zhang, Emily M. Lee
SJR Q1Cell stem cellOA
Public Health, Environmental and Occupational HealthMedicine
7
Article|189 citations·2008
Mind Bomb 1-Expressing Intermediate Progenitors Generate Notch Signaling to Maintain Radial Glial Cells
Ki‐Jun Yoon, Bon‐Kyoung Koo, Sun-Kyoung Im, Hyun‐Woo Jeong, Jaewang Ghim, Min‐Chul Kwon, Jin-Sook Moon, Takaki Miyata, Young‐Yun Kong
SJR Q1NeuronOA
Developmental NeuroscienceNeuroscience
8
Article|120 citations·2007
An Obligatory Role of Mind Bomb-1 in Notch Signaling of Mammalian Development
Bon‐Kyoung Koo, Mi-Jeong Yoon, Ki‐Jun Yoon, Sun-Kyoung Im, Yoon Young Kim, Cheol‐Hee Kim, Pann‐Ghill Suh, Yuh Nung Jan, Young‐Yun Kong
SJR Q1PLoS ONEOA

Our data provide the first evidence that Mib1 is essential for Jagged as well as Deltalike ligand-mediated Notch signaling in mammalian development, while Neur1, Neur2, and Mib2 are dispensable.

Molecular BiologyBiochemistry, Genetics and Molecular Biology
9
Review|94 citations·2018
Epigenetics and epitranscriptomics in temporal patterning of cortical neural progenitor competence
Ki‐Jun Yoon, Caroline Vissers, Guo‐li Ming, Hongjun Song
SJR Q1The Journal of Cell Biology

During embryonic brain development, neural progenitor/stem cells (NPCs) sequentially give rise to different subtypes of neurons and glia via a highly orchestrated process. To accomplish the ordered generation of distinct progenies, NPCs go through multistep transitions of their developmental competence. The molecular mechanisms driving precise temporal coordination of these transitions remains enigmatic. Epigenetic regulation, including changes in chromatin structures, DNA methylation, and histo

Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
Review|36 citations·2022
Setting the clock of neural progenitor cells during mammalian corticogenesis
Bonsang Koo, Ki‐Heon Lee, Guo‐li Ming, Ki‐Jun Yoon, Hongjun Song
SJR Q1Seminars in Cell and Developmental BiologyOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
11
Article|32 citations·2012
Mind bomb-1 is an essential modulator of long-term memory and synaptic plasticity via the Notch signaling pathway
Ki‐Jun Yoon, Hye‐Ryeon Lee, Yong Sang Jo, Kyongman An, Sang-Yong Jung, Min-Woo Jeong, Seok‐Kyu Kwon, Nam-Shik Kim, Hyun‐Woo Jeong, Seo-Hee Ahn, Kyong‐Tai Kim, Kyungmin Lee
SJR Q2Molecular BrainOA

BACKGROUND: Notch signaling is well recognized as a key regulator of the neuronal fate during embryonic development, but its function in the adult brain is still largely unknown. Mind bomb-1 (Mib1) is an essential positive regulator in the Notch pathway, acting non-autonomously in the signal-sending cells. Therefore, genetic ablation of Mib1 in mature neuron would give valuable insight to understand the cell-to-cell interaction between neurons via Notch signaling for their proper function. RESUL

Developmental NeuroscienceNeuroscience
12
Review|30 citations·2019
Modeling Host-Virus Interactions in Viral Infectious Diseases Using Stem-Cell-Derived Systems and CRISPR/Cas9 Technology
Jihoon Kim, Bon‐Kyoung Koo, Ki‐Jun Yoon
SJR Q1VirusesOA

Pathologies induced by viral infections have undergone extensive study, with traditional model systems such as two-dimensional (2D) cell cultures and in vivo mouse models contributing greatly to our understanding of host-virus interactions. However, the technical limitations inherent in these systems have constrained efforts to more fully understand such interactions, leading to a search for alternative in vitro systems that accurately recreate in vivo physiology in order to advance the study of

Molecular BiologyBiochemistry, Genetics and Molecular Biology
13
letter|30 citations·2018
Epitranscriptomes in the Adult Mammalian Brain: Dynamic Changes Regulate Behavior
Ki‐Jun Yoon, Guo‐li Ming, Hongjun Song
SJR Q1NeuronOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Article|20 citations·2020
LSM12-EPAC1 defines a neuroprotective pathway that sustains the nucleocytoplasmic RAN gradient
Jongbo Lee, Jumin Park, Ji-hyung Kim, Giwook Lee, Tae‐Eun Park, Ki‐Jun Yoon, Yoon Ki Kim, Chunghun Lim
SJR Q1PLoS BiologyOA

Nucleocytoplasmic transport (NCT) defects have been implicated in neurodegenerative diseases such as C9ORF72-associated amyotrophic lateral sclerosis and frontotemporal dementia (C9-ALS/FTD). Here, we identify a neuroprotective pathway of like-Sm protein 12 (LSM12) and exchange protein directly activated by cyclic AMP 1 (EPAC1) that sustains the nucleocytoplasmic RAN gradient and thereby suppresses NCT dysfunction by the C9ORF72-derived poly(glycine-arginine) protein. LSM12 depletion in human ne

Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Article|17 citations·2021
CYFIP1 Dosages Exhibit Divergent Behavioral Impact via Diametric Regulation of NMDA Receptor Complex Translation in Mouse Models of Psychiatric Disorders
Namshik Kim, Francisca Rojas, Minghao Yin, Ha Nam Nguyen, Stephanie J. Temme, Yu-Ting Lin, Stephen Eacker, Valina L. Dawson, Ted M. Dawson, Bo Xiao, Kuei‐Sen Hsu, Stefan Canzar
SJR Q1Biological PsychiatryOA
GeneticsBiochemistry, Genetics and Molecular Biology

Research Areas

Molecular BiologyDevelopmental NeurosciencePublic Health, Environmental and Occupational HealthGeneticsCellular and Molecular NeuroscienceCognitive Neuroscience

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