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Seung Hee Lee

Seoul National University · 生化学・遺伝学・分子生物学

研究室紹介

Professor Seung Hee Lee's research lab focuses on deciphering the gene regulatory networks that govern neuronal cell fate specification during central nervous system development. The lab investigates how transcription factors, coactivators like ASC-2, and non-coding RNAs such as miR-218 coordinate to determine neuronal identity, particularly in spinal motor neurons and hypothalamic neurons. Key research directions include the epigenetic regulation of transcription by H3K4 methyltransferase complexes (e.g., MLL3/4-ASCOM), the role of LIM-homeodomain factors in neuronal differentiation, and the integration of transcriptional and post-transcriptional mechanisms in neural fate determination. The lab combines genetic, genomic, and stem cell differentiation approaches to uncover principles for directed neuronal differentiation with potential applications in regenerative medicine.

neuronal fate specificationgene regulatory networkstranscription factorsepigenetic regulationmicroRNA

Research Overview

Papers
127
Total Citations
4,075
Papers (5y)
28
Primary Field
生化学・遺伝学・分子生物学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
28total
2022
2023
2024
2025
2026
Citations per year (5y)
71total
20222023202420252026

Selected Papers

15
1
Article|256 citations·2011
UTX, a Histone H3-Lysine 27 Demethylase, Acts as a Critical Switch to Activate the Cardiac Developmental Program
Seunghee Lee, Jae W. Lee, Soo‐Kyung Lee, Soo‐Kyung Lee, Soo‐Kyung Lee
SJR Q1Developmental CellOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|165 citations·2006
Coactivator as a target gene specificity determinant for histone H3 lysine 4 methyltransferases
Seunghee Lee, Dong-Kee Lee, Yali Dou, Jeongkyung Lee, Bora Lee, Eunyee Kwak, Young‐Yun Kong, Soo‐Kyung Lee, Robert G. Roeder, Jae W. Lee
SJR Q1Proceedings of the National Academy of SciencesOA

Activating signal cointegrator-2 (ASC-2), a coactivator of multiple transcription factors that include retinoic acid receptor (RAR), associates with histone H3-K4 methyltranferases (H3K4MTs) MLL3 and MLL4 in mixed-lineage leukemia. Here, we show that mice expressing a SET domain mutant of MLL3 share phenotypes with isogenic ASC2+/- mice and that expression and H3-K4 trimethylation of RAR target gene RAR-beta2 are impaired in ASC-2-null mouse embryo fibroblasts (MEFs) or in MEFs expressing siRNAs

Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
Article|119 citations·2014
Isl1 Directly Controls a Cholinergic Neuronal Identity in the Developing Forebrain and Spinal Cord by Forming Cell Type-Specific Complexes
Hyong-Ho Cho, Francesca Cargnin, Yu‐Jin Kim, Bora Lee, Ryuk-Jun Kwon, Heejin Nam, Rongkun Shen, Anthony P. Barnes, Jae W. Lee, Seunghee Lee, Soo‐Kyung Lee
SJR Q1PLoS GeneticsOA

The establishment of correct neurotransmitter characteristics is an essential step of neuronal fate specification in CNS development. However, very little is known about how a battery of genes involved in the determination of a specific type of chemical-driven neurotransmission is coordinately regulated during vertebrate development. Here, we investigated the gene regulatory networks that specify the cholinergic neuronal fates in the spinal cord and forebrain, specifically, spinal motor neurons

Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Article|110 citations·2008
A Regulatory Network to Segregate the Identity of Neuronal Subtypes
Seunghee Lee, Seunghee Lee, Bora Lee, Kaumudi Joshi, Samuel L. Pfaff, Jae W. Lee, Soo‐Kyung Lee, Soo‐Kyung Lee
SJR Q1Developmental CellOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
5
Article|106 citations·2009
Retinoid Signaling and Neurogenin2 Function Are Coupled for the Specification of Spinal Motor Neurons through a Chromatin Modifier CBP
Seunghee Lee, Seunghee Lee, Bora Lee, Jae W. Lee, Soo-Kyung Lee, Soo-Kyung Lee
SJR Q1NeuronOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
6
Article|98 citations·2008
Activating Signal Cointegrator-2 Is an Essential Adaptor to Recruit Histone H3 Lysine 4 Methyltransferases MLL3 and MLL4 to the Liver X Receptors
Seunghee Lee, Jeongkyung Lee, Jeongkyung Lee, Soo-Kyung Lee, Jae W. Lee, Jae W. Lee
Molecular EndocrinologyOA

Activating signal cointegrator-2 (ASC-2), a coactivator of multiple nuclear receptors and transcription factors, including the liver X receptors (LXRs), is associated with histone H3 lysine 4 (H3K4) methyltransferase (H3K4MT) MLL3 or its paralogue MLL4 in a steady-state complex named ASCOM (ASC-2 complex). ASCOM belongs to Set1-like complexes, a conserved family of related H3K4MT complexes. ASC-2 binds to many nuclear receptors in a ligand-dependent manner through its two LXXLL motifs. In partic

SurgeryMedicine
7
Article|85 citations·2015
miR-218 is essential to establish motor neuron fate as a downstream effector of Isl1–Lhx3
Karen P. Thiebes, Heejin Nam, Xiaolu A. Cambronne, Rongkun Shen, Stacey M. Glasgow, Hyong‐Ho Cho, Ji-Sun Kwon, Richard H. Goodman, Jae W. Lee, Seunghee Lee, Soo‐Kyung Lee
SJR Q1Nature CommunicationsOA

While microRNAs have emerged as an important component of gene regulatory networks, it remains unclear how microRNAs collaborate with transcription factors in the gene networks that determines neuronal cell fate. Here we show that in the developing spinal cord, the expression of miR-218 is directly upregulated by the Isl1–Lhx3 complex, which drives motor neuron fate. Inhibition of miR-218 suppresses the generation of motor neurons in both chick neural tube and mouse embryonic stem cells, suggest

Cancer ResearchBiochemistry, Genetics and Molecular Biology
8
Article|82 citations·2012
Fusion protein Isl1–Lhx3 specifies motor neuron fate by inducing motor neuron genes and concomitantly suppressing the interneuron programs
Seunghee Lee, James Cuvillier, Bora Lee, Rongkun Shen, Jae W. Lee, Soo‐Kyung Lee
SJR Q1Proceedings of the National Academy of SciencesOA

Combinatorial transcription codes generate the myriad of cell types during development and thus likely provide crucial insights into directed differentiation of stem cells to a specific cell type. The LIM complex composed of Isl1 and Lhx3 directs the specification of spinal motor neurons (MNs) in embryos. Here, we report that Isl1-Lhx3, a LIM-complex mimicking fusion, induces a signature of MN transcriptome and concomitantly suppresses interneuron differentiation programs, thereby serving as a p

Molecular BiologyBiochemistry, Genetics and Molecular Biology
9
Article|66 citations·2018
Dlx1/2 and Otp coordinate the production of hypothalamic GHRH- and AgRP-neurons
Bora Lee, Jang‐Hyun Kim, Taekyeong An, Sangsoo Kim, Esha Patel, Jacob Raber, Soo‐Kyung Lee, Seunghee Lee, Jae W. Lee
SJR Q1Nature CommunicationsOA

Despite critical roles of the hypothalamic arcuate neurons in controlling the growth and energy homeostasis, the gene regulatory network directing their development remains unclear. Here we report that the transcription factors Dlx1/2 and Otp coordinate the balanced generation of the two functionally related neurons in the hypothalamic arcuate nucleus, GHRH-neurons promoting the growth and AgRP-neurons controlling the feeding and energy expenditure. Dlx1/2-deficient mice show a loss-of-GHRH-neur

Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
Article|65 citations·2016
Critical Roles of the Histone Methyltransferase MLL4/KMT2D in Murine Hepatic Steatosis Directed by ABL1 and PPARγ2
Dae‐Hwan Kim, Jang‐Hyun Kim, Ji-Sun Kwon, Jaspreet Sandhu, Peter Tontonoz, Soo‐Kyung Lee, Seunghee Lee, Jae W. Lee
SJR Q1Cell ReportsOA

The pathophysiologic continuum of non-alcoholic fatty liver disease begins with steatosis. Despite recent advances in our understanding of the gene regulatory program directing steatosis, how it is orchestrated at the chromatin level is unclear. PPARγ2 is a hepatic steatotic transcription factor induced by overnutrition. Here, we report that the histone H3 lysine 4 methyltransferase MLL4/KMT2D directs overnutrition-induced murine steatosis via its coactivator function for PPARγ2. We demonstrate

Molecular BiologyBiochemistry, Genetics and Molecular Biology
11
Article|50 citations·2016
Chx10 Consolidates V2a Interneuron Identity through Two Distinct Gene Repression Modes
Yoanne M. Clovis, So Yeon Seo, Ji-Sun Kwon, Jennifer Chiyeon Rhee, Sujeong Yeo, Jae W. Lee, Seunghee Lee, Soo‐Kyung Lee
SJR Q1Cell ReportsOA

During development, two cell types born from closely related progenitor pools often express identical transcriptional regulators despite their completely distinct characteristics. This phenomenon implies the need for a mechanism that operates to segregate the identities of the two cell types throughout differentiation after initial fate commitment. To understand this mechanism, we investigated the fate specification of spinal V2a interneurons, which share important developmental genes with motor

Molecular BiologyBiochemistry, Genetics and Molecular Biology
12
Article|49 citations·2009
Crucial Roles for Interactions between MLL3/4 and INI1 in Nuclear Receptor Transactivation
Seunghee Lee, Dae‐Hwan Kim, Young Hwa Goo, Young Chul Lee, Soo‐Kyung Lee, Jae W. Lee
Molecular EndocrinologyOA

Nuclear receptor (NR) transactivation involves multiple coactivators, and the molecular basis for how these are functionally integrated needs to be determined to fully understand the NR action. Activating signal cointegrator-2 (ASC-2), a transcriptional coactivator of many NRs and transcription factors, forms a steady-state complex, ASCOM (for ASC-2 complex), which contains histone H3-lysine-4 (H3K4) methyltransferase MLL3 or its paralog MLL4. Here, we show that ASCOM requires a functional cross

Molecular BiologyBiochemistry, Genetics and Molecular Biology
13
Article|47 citations·2013
STAT3 promotes motor neuron differentiation by collaborating with motor neuron-specific LIM complex
Seunghee Lee, Rongkun Shen, Hyong-Ho Cho, Ryuk-Jun Kwon, So Yeon Seo, Jae W. Lee, Soo‐Kyung Lee
SJR Q1Proceedings of the National Academy of SciencesOA

The motor neuron (MN)-hexamer complex consisting of LIM homeobox 3, Islet-1, and nuclear LIM interactor is a key determinant of motor neuron specification and differentiation. To gain insights into the transcriptional network in motor neuron development, we performed a genome-wide ChIP-sequencing analysis and found that the MN-hexamer directly regulates a wide array of motor neuron genes by binding to the HxRE (hexamer response element) shared among the target genes. Interestingly, STAT3-binding

Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Article|41 citations·2014
Crucial roles of mixed‐lineage leukemia 3 and 4 as epigenetic switches of the hepatic circadian clock controlling bile acid homeostasis in mice
Dae‐Hwan Kim, Jennifer Chiyeon Rhee, Sujeong Yeo, Rongkun Shen, Soo‐Kyung Lee, Jae W. Lee, Seunghee Lee
SJR Q1Hepatology

UNLABELLED: The histone H3-lysine-4 methyltransferase mixed-lineage leukemia 3 (MLL3) and its closest homolog, MLL4 (aka KMT2D), belong to two homologous transcriptional coactivator complexes, named MLL3 and MLL4 complexes, respectively. MLL3 plays crucial roles in multiple metabolic processes. However, the physiological roles of MLL4 in metabolism and the relationship between MLL3 and MLL4 in metabolic gene regulation are unclear. To address these issues, we analyzed the phenotypes of newly gen

Endocrine and Autonomic SystemsNeuroscience
15
Review|35 citations·2009
Chapter 10 Roles of Histone H3‐Lysine 4 Methyltransferase Complexes in NR‐Mediated Gene Transcription
Seunghee Lee, Robert G. Roeder, Jae W. Lee
SJR Q4Progress in molecular biology and translational science
Molecular BiologyBiochemistry, Genetics and Molecular Biology

Research Areas

Molecular BiologyCancer ResearchGeneticsPlant ScienceEndocrine and Autonomic SystemsSurgery

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