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Soojin Yang

Seoul National University · 医学

研究室紹介

Professor Soojin Yang’s research lab focuses on the molecular mechanisms underlying daptomycin resistance in *Staphylococcus aureus*, particularly in methicillin-resistant (MRSA) strains. The lab investigates genetic and regulatory pathways—such as the GraRS two-component system, mprF and dlt gene expression, and cell wall remodeling—that modulate bacterial surface charge and contribute to antibiotic resistance. Using clinical isolates from treatment failures, especially in endovascular infections, the lab explores the interplay between resistance development, virulence, and therapeutic outcomes. Their work also examines the dynamics of resistance emergence under drug pressure, including the 'seesaw' phenomenon between daptomycin and oxacillin resistance.

daptomycin resistanceS. aureusantibiotic resistance mechanismscell surface chargeMRSA

Research Overview

Papers
104
Total Citations
4,231
Papers (5y)
28
Primary Field
医学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
28total
2022
2023
2024
2025
2026
Citations per year (5y)
130total
20222023202420252026

Selected Papers

15
1
Article|158 citations·2011
The Staphylococcus aureus Two-Component Regulatory System, GraRS, Senses and Confers Resistance to Selected Cationic Antimicrobial Peptides
Soo‐Jin Yang, Arnold S. Bayer, Nagendra N. Mishra, Michael Meehl, Nagender Ledala, Michael R. Yeaman, Yan Q. Xiong, Ambrose L. Cheung
SJR Q1Infection and ImmunityOA

The two-component regulatory system, GraRS, appears to be involved in staphylococcal responses to cationic antimicrobial peptides (CAPs). However, the mechanism(s) by which GraRS is induced, regulated, and modulated remain undefined. In this study, we used two well-characterized MRSA strains (Mu50 and COL) and their respective mutants of graR and vraG (encoding the ABC transporter-dependent efflux pump immediately downstream of graRS), and show that (i) the expression of two key determinants of

MicrobiologyImmunology and Microbiology
2
Article|137 citations·2009
Enhanced Expression ofdltABCDIs Associated with the Development of Daptomycin Nonsusceptibility in a Clinical Endocarditis Isolate ofStaphylococcus aureus
Soo‐Jin Yang, Barry N. Kreiswirth, George Sakoulas, Michael R. Yeaman, Yan Q. Xiong, Ayumi Sawa, Arnold S. Bayer
SJR Q1The Journal of Infectious DiseasesOA

Using isogenic clinical bloodstream Staphylococcus aureus strains from a patient with relapsing endocarditis, we investigated the transcriptional profiles of the mprF and dlt genes in the context of cell-surface charge and daptomycin nonsusceptibility. As in prior studies, a point mutation within mprF was observed in the daptomycin-nonsusceptible strain. However, neither the transcriptional profile of mprF nor the membrane phospholipid analyses were compatible with the anticipated mprF gain-in-f

Infectious DiseasesMedicine
3
Article|130 citations·2010
Daptomycin-Oxacillin Combinations in Treatment of Experimental Endocarditis Caused by Daptomycin-Nonsusceptible Strains of Methicillin-Resistant Staphylococcus aureus with Evolving Oxacillin Susceptibility (the “Seesaw Effect”)
Soo‐Jin Yang, Yan Q. Xiong, Susan Boyle‐Vavra, R Daum, Tiffanny Jones, Arnold S. Bayer
SJR Q1Antimicrobial Agents and ChemotherapyOA

In vivo development of daptomycin resistance (DAPr) among Staphylococcus aureus strains, especially methicillin-resistant S. aureus (MRSA) strains, in conjunction with clinical treatment failures, has emerged as a major problem. This has raised the question of DAP-based combination regimens to enhance efficacy against such strains. We studied five recent DAP-susceptible (DAPs)/DAPr clinical MRSA strain pairs obtained from patients who failed DAP monotherapy regimens, as well as one DAPs/DAPr MRS

Infectious DiseasesMedicine
4
Article|117 citations·2010
Cell Wall Thickening Is Not a Universal Accompaniment of the Daptomycin Nonsusceptibility Phenotype in Staphylococcus aureus : Evidence for Multiple Resistance Mechanisms
Soo‐Jin Yang, Cynthia C. Nast, Nagendra N. Mishra, Michael R. Yeaman, Paul D. Fey, Arnold S. Bayer
SJR Q1Antimicrobial Agents and Chemotherapy

The mechanism(s) of daptomycin (DAP) resistance (DAPr) is incompletely defined. Thickened cell walls (CWs) acting as either a mechanical barrier or an affinity trap for DAP have been purported to be a major contributor to the DAPr phenotype. To this end, we studied an isogenic set of methicillin-resistant Staphylococcus aureus (MRSA) isolates (pulsotype USA 300) from the bloodstream of a DAP-treated patient with endocarditis in which serial strains exhibited increasing DAPr. Of interest, the DAP

Infectious DiseasesMedicine
5
Article|114 citations·2014
Phenotypic and Genotypic Characterization of Daptomycin-Resistant Methicillin-Resistant Staphylococcus aureus Strains: Relative Roles of mprF and dlt Operons
Nagendra N. Mishra, Arnold S. Bayer, Christopher Weidenmaier, Timo Grau, Stefanie Wanner, Stefania Stefani, Viviana Cafiso, Taschia Bertuccio, Michael R. Yeaman, Cynthia C. Nast, Soo‐Jin Yang
SJR Q1PLoS ONEOA

Development of in vivo daptomycin resistance (DAP-R) among Staphylococcus aureus clinical isolates, in association with clinical treatment failures, has become a major therapeutic problem. This issue is especially relevant to methicillin-resistant S. aureus (MRSA) strains in the context of invasive endovascular infections. In the current study, we used three well-characterized and clinically-derived DAP-susceptible (DAP-S) vs. resistant (DAP-R) MRSA strain-pairs to elucidate potential genotypic

Infectious DiseasesMedicine
6
Article|103 citations·2009
Regulation of mprF in Daptomycin-Nonsusceptible Staphylococcus aureus Strains
Soo‐Jin Yang, Yan Q. Xiong, Paul M. Dunman, Jacques Schrenzel, Patrice François, Andreas Peschel, Arnold S. Bayer
SJR Q1Antimicrobial Agents and ChemotherapyOA

We used a well-characterized isogenic set of clinical bloodstream Staphylococcus aureus strains to study (i) regulation of mprF-mediated phosphatidylglycerol lysinylation in the contexts of in vitro daptomycin (DAP) nonsuceptibility and (ii) the role of mprF mutation in endovascular virulence. We observed a correlation between increased expression of a mutant mprF gene and reduced in vitro DAP susceptibility. There were no detectable fitness differences between strains in experimental infective

Infectious DiseasesMedicine
7
Article|93 citations·2013
Causal Role of Single Nucleotide Polymorphisms within the mprF Gene of Staphylococcus aureus in Daptomycin Resistance
Soo‐Jin Yang, Nagendra N. Mishra, Aileen Rubio, Arnold S. Bayer
SJR Q1Antimicrobial Agents and ChemotherapyOA

Single nucleotide polymorphisms (SNPs) within the mprF open reading frame (ORF) have been commonly observed in daptomycin-resistant (DAP(r)) Staphylococcus aureus strains. Such SNPs are usually associated with a gain-in-function phenotype, in terms of either increased synthesis or enhanced translocation (flipping) of lysyl-phosphatidylglycerol (L-PG). However, it is unclear if such mprF SNPs are causal in DAP(r) strains or are merely a biomarker for this phenotype. In this study, we used an isog

Infectious DiseasesMedicine
8
Article|83 citations·2013
Emergence of Daptomycin Resistance in Daptomycin-Naïve Rabbits with Methicillin-Resistant Staphylococcus aureus Prosthetic Joint Infection Is Associated with Resistance to Host Defense Cationic Peptides and mprF Polymorphisms
Nagendra N. Mishra, Soo‐Jin Yang, Liang Chen, C. Muller, Azzam Saleh‐Mghir, Sebastian Kuhn, Andreas Peschel, Michael R. Yeaman, Cynthia C. Nast, Barry N. Kreiswirth, Anne–Claude Crémieux, Arnold S. Bayer
SJR Q1PLoS ONEOA

THESE RESULTS SUGGEST: i) DAP MIC increases may occur in the absence of DAP exposures in vivo and may be triggered by organism exposure to endogenous HDPs: and ii) gain-in-function SNPs in mprF may contribute to such HDP-DAP cross-resistance phenotypes, although the mechanism of this relationship remains to be defined.

Infectious DiseasesMedicine
9
Article|82 citations·2006
Characterization of the Staphylococcus aureus CidR regulon: elucidation of a novel role for acetoin metabolism in cell death and lysis
Soo‐Jin Yang, Paul M. Dunman, Steven J. Projan, Kenneth W. Bayles
SJR Q1Molecular MicrobiologyOA

The Staphylococcus aureus cid and lrg operons encode a novel regulatory system that affects murein hydrolase activity, stationary-phase survival and antibiotic tolerance. Expression of the lrgAB operon is positively regulated by a two-component regulatory system encoded by the lytSR operon located immediately upstream to lrgAB. By comparison, the cidABC operon lies downstream from the cidR gene, encoding a protein homologous to the LysR-type family of transcriptional regulators. Transcription an

Infectious DiseasesMedicine
10
Article|76 citations·2005
A LysR-Type Regulator, CidR, Is Required for Induction of the Staphylococcus aureus cidABC Operon
Soo‐Jin Yang, Kelly C. Rice, Raquel J. Brown, Toni G. Patton, Linda E. Liou, Yong Ho Park, Kenneth W. Bayles
SJR Q2Journal of BacteriologyOA

The Staphylococcus aureus cidABC and lrgAB operons have been shown to regulate murein hydrolase activity and affect antibiotic tolerance. The cid operon enhances murein hydrolase activity and antibiotic sensitivity, whereas the lrg operon inhibits these processes. Based on these findings and the structural similarities of the cidA and lrgA gene products to the bacteriophage holin family of proteins, we have proposed that the cid and lrg operons encode holin- and antiholin-like proteins, respecti

GeneticsBiochemistry, Genetics and Molecular Biology
11
Article|54 citations·2016
Dysregulation ofmprFanddltABCDexpression among daptomycin-non-susceptible MRSA clinical isolates
Arnold S. Bayer, Nagendra N. Mishra, Ambrose L. Cheung, Aileen Rubio, Soo‐Jin Yang
SJR Q1Journal of Antimicrobial ChemotherapyOA

BACKGROUND: In small series or individual reports, SNPs within the mprF ORF and dysregulation of its expression in Staphylococcus aureus have been linked to daptomycin resistance (DAP-R) via a proposed gain-in-function mechanism. Similarly, dysregulation of dltABCD has also been associated with DAP-R. METHODS: Using 22 well-characterized, isogenic daptomycin-susceptible (DAP-S)/DAP-R clinical MRSA strain pairs, we assessed potential relationships of the DAP-R phenotype with: (i) regulation of mp

Infectious DiseasesMedicine
12
Article|47 citations·2008
Gaetbulibacter marinus sp. nov., isolated from coastal seawater, and emended description of the genus Gaetbulibacter
Soo‐Jin Yang, Jang‐Cheon Cho
SJR Q1INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

A Gram-negative, yellow-coloured, chemoheterotrophic, non-motile, strictly aerobic, rod-shaped bacterium, designated IMCC1914(T), was isolated from coastal surface seawater of the Yellow Sea, Korea. The temperature, pH and NaCl ranges for growth were 3-37 degrees C, pH 8.0-11.0 and 0.5-4.0 %. The DNA G+C content of the strain was 38.1 mol% and the major cellular fatty acids were iso-C(15 : 1) (32.1 %), iso-C(15 : 0) (20.6 %) and iso-C(17 : 0) 3-OH (7.8 %). Phylogenetic analysis based on 16S rRNA

Molecular BiologyBiochemistry, Genetics and Molecular Biology
13
Article|47 citations·2013
Role of the LytSR Two-Component Regulatory System in Adaptation to Cationic Antimicrobial Peptides in Staphylococcus aureus
Soo‐Jin Yang, Yan Q. Xiong, Michael R. Yeaman, Kenneth W. Bayles, Wessam Abdelhady, Arnold S. Bayer
SJR Q1Antimicrobial Agents and ChemotherapyOA

Many host defense cationic antimicrobial peptides (HDPs) perturb the staphylococcal cell membrane (CM) and alter transmembrane potential (ΔΨ) as key parts of their lethal mechanism. Thus, a sense-response system for detecting and mediating adaptive responses to such stresses could impact organism survival; the Staphylococcus aureus LytSR two-component regulatory system (TCRS) may serve as such a ΔΨ sensor. One well-known target of this system is the lrgAB operon, which, along with the related ci

MicrobiologyImmunology and Microbiology
14
Article|36 citations·2000
THE MECHANISM OF CONTRACTION BY 2-CHLOROADENOSINE IN CAT DETRUSOR MUSCLE CELLS
Soo‐Jin Yang, Ja Young An, Jun O. Shim, Cheonkyu Park, In Hoi Huh, Uy Dong Sohn
SJR Q1The Journal of Urology

PURPOSE: Four adenosine receptors (ARs), designated A1AR (A1 adenosine receptor), A2aAR (A2a adenosine receptor), A2bAR (A2b adenosine receptor), and A3AR (A3 adenosine receptor), have been cloned from various species, but the contraction mechanism via A1ARs in cat detrusor muscle cell is not well known. MATERIALS AND METHODS: We examined the cellular mechanism using an A1AR agonist 2-chloroadenosine (2-CA) in cat detrusor cell isolated by enzymatic digestion. To examine which phospholipase medi

UrologyMedicine
15
Article|23 citations·2022
Co-occurrence of cfr-mediated linezolid-resistance in ST398 LA-MRSA and non-aureus staphylococci isolated from a pig farm
Gi Yong Lee, Geun‐Bae Kim, Soo‐Jin Yang
SJR Q1Veterinary Microbiology
Infectious DiseasesMedicine

Research Areas

Infectious DiseasesBiotechnologyMolecular BiologyMicrobiologyGeneticsUrology

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