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Yun-Ho Choi

Korea University · 生化学・遺伝学・分子生物学

研究室紹介

Professor Yun-Ho Choi's research lab specializes in developing label-free, sensitive biosensing technologies for early disease diagnosis, with a focus on leveraging surface-enhanced Raman spectroscopy (SERS) and artificial intelligence to analyze exosomes and viral particles. The lab pioneers noninvasive liquid biopsy approaches using nanoscale biomarkers from body fluids, enabling early detection of multiple cancers and emerging viral infections. Key research directions include the identification of unique Raman signatures in exosomes and viral envelopes, combined with machine learning and statistical pattern analysis for high-accuracy diagnostics.

SERSexosomeliquid biopsyAI diagnosticsviral detection

Research Overview

Papers
129
Total Citations
4,107
Papers (5y)
40
Primary Field
生化学・遺伝学・分子生物学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
40total
2022
2023
2024
2025
2026
Citations per year (5y)
622total
20222023202420252026

Selected Papers

15
1
Article|473 citations·2020
Early-Stage Lung Cancer Diagnosis by Deep Learning-Based Spectroscopic Analysis of Circulating Exosomes
Hyunku Shin, Seunghyun Oh, Soonwoo Hong, Min-Sung Kang, Daehyeon Kang, Yong-gu Ji, Byeong Hyeon Choi, Ka‐Won Kang, Hyesun Jeong, Yong Park, Sunghoi Hong, Hyun Koo Kim
SJR Q1ACS Nano

Lung cancer has a high mortality rate, but an early diagnosis can contribute to a favorable prognosis. A liquid biopsy that captures and detects tumor-related biomarkers in body fluids has great potential for early-stage diagnosis. Exosomes, nanosized extracellular vesicles found in blood, have been proposed as promising biomarkers for liquid biopsy. Here, we demonstrate an accurate diagnosis of early-stage lung cancer, using deep learning-based surface-enhanced Raman spectroscopy (SERS) of the

Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|354 citations·2023
Single test-based diagnosis of multiple cancer types using Exosome-SERS-AI for early stage cancers
Hyunku Shin, Byeong Hyeon Choi, On Shim, Jihee Kim, Yong Park, Suk Ki Cho, Hyun Koo Kim, Yeonho Choi
SJR Q1Nature CommunicationsOA

Early cancer detection has significant clinical value, but there remains no single method that can comprehensively identify multiple types of early-stage cancer. Here, we report the diagnostic accuracy of simultaneous detection of 6 types of early-stage cancers (lung, breast, colon, liver, pancreas, and stomach) by analyzing surface-enhanced Raman spectroscopy profiles of exosomes using artificial intelligence in a retrospective study design. It includes classification models that recognize sign

Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
Article|240 citations·2017
Exosome Classification by Pattern Analysis of Surface-Enhanced Raman Spectroscopy Data for Lung Cancer Diagnosis
Jaena Park, Miyeon Hwang, Byeong Hyeon Choi, Hyesun Jeong, Jik-han Jung, Hyun Koo Kim, Sunghoi Hong, Ji‐Ho Park, Yeonho Choi
SJR Q1Analytical Chemistry

Owing to the role of exosome as a cargo for intercellular communication, especially in cancer metastasis, the evidence has been consistently accumulated that exosomes can be used as a noninvasive indicator of cancer. Consequently, several studies applying exosome have been proposed for cancer diagnostic methods such as ELISA assay. However, it has been still challenging to get reliable results due to the requirement of a labeling process and high concentration of exosome. Here, we demonstrate a

Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Article|228 citations·2018
Correlation between Cancerous Exosomes and Protein Markers Based on Surface-Enhanced Raman Spectroscopy (SERS) and Principal Component Analysis (PCA)
Hyunku Shin, Hyesun Jeong, Jaena Park, Sunghoi Hong, Yeonho Choi
SJR Q1ACS Sensors

Exosomes, which are nanovesicles secreted by cells, are promising biomarkers for cancer diagnosis and prognosis, based on their specific surface protein compositions. Here, we demonstrate the correlation of nonsmall cell lung cancer (NSCLC) cell-derived exosomes and potential protein markers by unique Raman scattering profiles and principal component analysis (PCA) for cancer diagnosis. On the basis of surface enhanced Raman scattering (SERS) signals of exosomes from normal and NSCLC cells, we e

Molecular BiologyBiochemistry, Genetics and Molecular Biology
5
Article|108 citations·2015
Assessment of clinical and MRI outcomes after mesenchymal stem cell implantation in patients with knee osteoarthritis: a prospective study
Y.S. Kim, Yeonho Choi, S.W. Lee, Ohchan Kwon, Dong‐Suk Suh, Dong Beom Heo, Yong Gon Koh
SJR Q1Osteoarthritis and CartilageOA
RheumatologyMedicine
6
Article|83 citations·2015
Identification of Newly Emerging Influenza Viruses by Surface-Enhanced Raman Spectroscopy
Jae Young Lim, Jung-soo Nam, Se-eun Yang, Hyunku Shin, Yoon‐ha Jang, Gyu‐Un Bae, Taewook Kang, Kwang‐il Lim, Yeonho Choi
SJR Q1Analytical Chemistry

In this work, we demonstrate in situ virus identification based on surface-enhanced Raman scattering (SERS). We hypothesized that newly emerging influenza viruses possess surface proteins and lipids that can generate distinctive Raman signals. To test this hypothesis, SERS signals were measured from the surface of a noninfluenza virus, two different influenza viruses, and a genetically shuffled influenza virus. To ensure the safety for experimenters we constructed nonreplicating pseudotyped viru

Biomedical EngineeringEngineering
7
Article|63 citations·2019
Identification of Newly Emerging Influenza Viruses by Detecting the Virally Infected Cells Based on Surface Enhanced Raman Spectroscopy and Principal Component Analysis
Jae‐Young Lim, Jung-soo Nam, Hyunku Shin, Jaena Park, Hye-in Song, Min-Sung Kang, Kwang‐il Lim, Yeonho Choi
SJR Q1Analytical Chemistry

Rapid diagnosis and quarantine of influenza virus mutant-infected people is critical to contain the fatal viral infection spread because effective antiviral drugs are normally not available. Conventional methods, however, cannot be used for the diagnosis because these methods need predefined labels, likely also unavailable for just emerging viruses. Here, we propose label-free identification of cells infected with different influenza viruses based on surface-enhanced Raman spectroscopy (SERS) an

EpidemiologyMedicine
8
Article|56 citations·2023
Artificial Intelligence-Based Major Depressive Disorder (MDD) Diagnosis Using Raman Spectroscopic Features of Plasma Exosomes
Hyunku Shin, Youbin Kang, Kwan Woo Choi, Seungmin Kim, Byung‐Joo Ham, Yeonho Choi
SJR Q1Analytical Chemistry

In vitro diagnosis using biomarkers for major depressive disorder (MDD) can offer considerable advantages in overcoming the lack of objective tests for depression and treating more patients. Plasma exosomes can be novel biomarkers for MDD based on their ability to pass through the blood-brain barrier and offer brain-related information. Here, we demonstrate a novel and precise MDD diagnosis using deep learning analysis and surface-enhanced Raman spectroscopy (SERS) of plasma exosomes. Our system

Molecular BiologyBiochemistry, Genetics and Molecular Biology
9
Article|56 citations·2010
The Effect of Thermal Gradients in SERS Spectroscopy
Taewook Kang, SoonGweon Hong, Yeonho Choi, Luke P. Lee
SJR Q1SmallOA

The importance of the photothermal effect in surface enhanced Raman scattering (SERS) measurements is addressed. Strong temperature gradient (≈106 K m−1) induced by photothermal effect can force molecules to move. Finally, redistributed molecules can result in a nonuniform SERS intensity. Detailed facts of importance to specialist readers are published as ”Supporting Information”. Such documents are peer-reviewed, but not copy-edited or typeset. They are made available as submitted by the author

Electronic, Optical and Magnetic MaterialsMaterials Science
10
Review|49 citations·2020
Extracellular Vesicle Identification Using Label-Free Surface-Enhanced Raman Spectroscopy: Detection and Signal Analysis Strategies
Hyunku Shin, Dongkwon Seo, Yeonho Choi
SJR Q1MoleculesOA

Extracellular vesicles (EVs) have been widely investigated as promising biomarkers for the liquid biopsy of diseases, owing to their countless roles in biological systems. Furthermore, with the notable progress of exosome research, the use of label-free surface-enhanced Raman spectroscopy (SERS) to identify and distinguish disease-related EVs has emerged. Even in the absence of specific markers for disease-related EVs, label-free SERS enables the identification of unique patterns of disease-rela

Molecular BiologyBiochemistry, Genetics and Molecular Biology
11
Article|48 citations·2012
Self-Assembled Three-Dimensional Nanocrown Array
SoonGweon Hong, Taewook Kang, Dukhyun Choi, Yeonho Choi, Luke P. Lee
SJR Q1ACS Nano

Although an ordered nanoplasmonic probe array will have a huge impact on light harvesting, selective frequency response (i.e., nanoantenna), and quantitative molecular/cellular imaging, the realization of such an array is still limited by conventional techniques due to the serial processing or resolution limit by light diffraction. Here, we demonstrate a thermodynamically driven, self-assembled three-dimensional nanocrown array that consists of a core and six satellite gold nanoparticles (GNPs).

Computational MechanicsEngineering
12
Article|41 citations·2020
Protein Quantification and Imaging by Surface‐Enhanced Raman Spectroscopy and Similarity Analysis
Hyunku Shin, Seunghyun Oh, Daehyeon Kang, Yeonho Choi
SJR Q1Advanced ScienceOA

Protein quantification techniques such as immunoassays have been improved considerably, but they have several limitations, including time-consuming procedures, low sensitivity, and extrinsic detection. Because direct surface-enhanced Raman spectroscopy (SERS) can detect intrinsic signals of proteins, it can be used as an effective detection method. However, owing to the complexity and reliability of SERS signals, SERS is rarely adopted for quantification without a purified target protein. This s

Electronic, Optical and Magnetic MaterialsMaterials Science
13
Article|39 citations·2014
Highly sensitive and selective anticancer effect by conjugated HA-cisplatin in non-small cell lung cancer overexpressed with CD44
Yu Hua Quan, Byungji Kim, Ji‐Ho Park, Yeonho Choi, Yeonho Choi, Young Ho Choi, Young Ho Choi, Hyun Koo Kim
SJR Q3Experimental Lung Research

In spite of severe side effects, chemotherapy is widely used as a major anticancer treatment in non-small cell lung cancer (NSCLC). In order to enhance the therapeutic properties and reduce side effects, enormous efforts have been devoted to direct anticancer agents specifically to tumor tissues by the use of nanoparticles, or cancer cell marker attached drugs. However, cell-specific chemotherapy is still in its infancy and is not applicable to all types of cancers due to the complexity of the c

Cell BiologyBiochemistry, Genetics and Molecular Biology
14
Article|35 citations·2016
Autoenhanced Raman Spectroscopy via Plasmonic Trapping for Molecular Sensing
Soonwoo Hong, On Shim, Hyosung Kwon, Yeonho Choi
SJR Q1Analytical Chemistry

As a label-free and sensitive biosensor, surface-enhanced Raman spectroscopy (SERS) is a rapidly emerging technique. However, because SERS spectra are obtained in the area of light excitation and the enhancement effect can be varied depending on the position of a substrate, it is important to match the enhanced area with an illuminated spot. Here, in order to overcome such difficulty, we demonstrated a new technique combining SERS with plasmonic trapping. By plasmonic trapping, we can collect go

Electronic, Optical and Magnetic MaterialsMaterials Science
15
Article|34 citations·2023
Plasma Exosome Analysis for Protein Mutation Identification Using a Combination of Raman Spectroscopy and Deep Learning
Seungmin Kim, Byeong Hyeon Choi, Hyunku Shin, Kihun Kwon, Sung Yong Lee, Hyun Bin Yoon, Hyun Koo Kim, Yeonho Choi
SJR Q1ACS Sensors

Protein mutation detection using liquid biopsy can be simply performed periodically, making it easy to detect the occurrence of newly emerging mutations rapidly. However, it has low diagnostic accuracy since there are more normal proteins than mutated proteins in body fluids. To increase the diagnostic accuracy, we analyzed plasma exosomes using nanoplasmonic spectra and deep learning. Exosomes, a promising biomarker, are abundant in plasma and stably carry intact proteins originating from mothe

BiophysicsBiochemistry, Genetics and Molecular Biology

Research Areas

Molecular BiologyElectronic, Optical and Magnetic MaterialsBiomedical EngineeringPulmonary and Respiratory MedicineBiophysicsAstronomy and Astrophysics

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