Seong Eon Ryu
한양대학교 생명공학과 · 생화학·유전·분자생물학
Seong Eon Ryu 교수의 연구실은 단백질의 구조 기반 기능 해석을 중심으로, 산소 농도 변화에 따른 세포 반응 조절, 이온 및 전자 전달 메커니즘, 산화환원 반응을 통한 단백질 기능 조절 등 생물학적 스위치 기작을 규명하는 데 집중하고 있습니다. 특히, HIF-1, DsbD, TRP14, Eya 단백질 등 생존 및 발달 신호 전달에 핵심적인 단백질들의 고해상도 구조를 규명함으로써, 이들의 기질 특이성과 활성 조절 메커니즘을 기초적으로 밝혀내고 있습니다. 이는 암, 대사질환, 면역질환 등과 관련된 질병의 분자 기전 해석에 기여하고 있습니다.
표시된 성과는 수집된 데이터 기준으로 산출되며, 일부 차이가 있을 수 있습니다.
The master switch of cellular hypoxia responses, hypoxia-inducible factor 1 (HIF-1), is hydroxylated by factor inhibiting HIF-1 (FIH-1) at a conserved asparagine residue under normoxia, which suppresses transcriptional activity of HIF-1 by abrogating its interaction with transcription coactivators. Here we report the crystal structure of human FIH-1 at 2.8-A resolution. The structural core of FIH-1 consists of a jellyroll-like beta-barrel containing the conserved ferrous-binding triad residues,
The Escherichia coli transmembrane protein DsbD transfers electrons from the cytoplasm to the periplasm through a cascade of thiol-disulfide exchange reactions. In this process, the C-terminal periplasmic domain of DsbD (DsbDgamma) shuttles the reducing potential from the membrane domain (DsbDbeta) to the N-terminal periplasmic domain (DsbDalpha). The crystal structure of DsbDgamma determined at 1.9 A resolution reveals that the domain has a thioredoxin fold with an extended N-terminal stretch.
Thioredoxin-related protein 14 (TRP14) is involved in regulating tumor necrosis factor-alpha-induced signaling pathways in a different manner from human thioredoxin 1 (Trx1). Here, we report the crystal structure of human TRP14 determined at 1.8-A resolutions. The structure reveals a typical thioredoxin fold with characteristic structural features that account for the substrate specificity of the protein. The surface of TRP14 in the vicinity of the active site includes an extended loop and an ad
Eya proteins are transcription factors that play pivotal roles in organ formation during development by mediating interactions between Sine Oculis (SO) and Dachshund (DAC). Remarkably, the transcriptional activity of Eya proteins is regulated by a dephosphorylating activity within its Eya domain (ED). However, the molecular basis for the link between catalytic and transcriptional activities remains unclear. Here we report the first description of the crystal structure of the ED of human Eya2 (ED
Mitogen-activated protein kinases (MAPKs) mediate a variety of cell signals regulating cell growth, differentiation, transcription, and metabolism. MAPKs are fully activated by dual phosphorylation on tyrosine and threonine in their activation loops. This process is thought to be counteracted by a family of proteins termed dual-specificity protein tyrosine phosphatases (DSPs). Inadequate production or action of MAPKs or DSPs has been associated with diverse human disorders, including cancer, dia
The oxidation of cysteine sulphydryl in proteins produces sulphenic acid that can form a reversible disulphide bond with another cysteine. The disulphide bond formation often triggers switches in protein structure and activity, especially when the distance between the two cysteine sulphur atoms is longer than the resulting disulphide bond distance. As an early example for the reversible disulphide bond-mediated functional switches, the reduced and oxidized forms of the bacterial transcription fa
The testis- and skeletal-muscle-specific dual-specificity phosphatase (TMDP) is a member of the dual-specificity phosphatase (DSP) subgroup of protein tyrosine phosphatases. TMDP has similar activities toward both tyrosine and threonine phosphorylated substrates, and is supposed to be involved in spermatogenesis. Here, we report the crystal structure of human TMDP at a resolution of 2.4 A. In spite of high sequence similarity with other DSPs, the crystal structure of TMDP shows distinct structur
Dual specificity protein tyrosine phosphatases (DSPs) play an important role in controlling various cellular processes, including cell growth, differentiation, transcription, and metabolism by catalyzing the hydrolysis of phosphorylated protein substrates.1 To meet the demand for distinct functions implicated in diverse cellular signaling, the human genome is estimated to encode 61 DSPs among 107 protein tyrosine phosphatases (PTPs).2 According to their structural and functional characteristics,