Tohoku University · 생화학·유전·분자생물학
Yusuke Sato 교수의 연구실은 생체분자 기반의 나노구조 설계와 액체-액체 상분리 현상을 핵심으로 삼아, DNA 나노구조를 이용한 프로그래머블한 다이내믹 시스템을 개발하고 있습니다. 특히 DNA의 염기서열 설계를 통해 상전이 온도, 융합·분열, 제아누스형 구조 형성 등 동적 기능을 정밀하게 제어하는 데 초점을 맞추고 있으며, 이는 인공세포 및 분자 로봇 구현에 기여합니다. 또한 지질 이중층 막 상에서 DNA 옹모리의 환경 의존적 자가조립 메커니즘을 규명함으로써 생체막 기반 기능성 나노디바이스의 설계 원리를 제시하고 있습니다.
표시된 성과는 수집된 데이터 기준으로 산출되며, 일부 차이가 있을 수 있습니다.
DNA has the potential to achieve a controllable macromolecular structure, such as hydrogels or droplets formed through liquid-liquid phase separation (LLPS), as the design of its base sequence can result in programmable interactions. Here, we constructed "DNA droplets" via LLPS of sequence-designed DNA nanostructures and controlled their dynamic functions by designing their sequences. Specifically, we were able to adjust the temperature required for the formation of DNA droplets by designing the
Rapid progress in nanoscale bioengineering has allowed for the design of biomolecular devices that act as sensors, actuators, and even logic circuits. Realization of micrometer-sized robots assembled from these components is one of the ultimate goals of bioinspired robotics. We constructed an amoeba-like molecular robot that can express continuous shape change in response to specific signal molecules. The robot is composed of a body, an actuator, and an actuator-controlling device (clutch). The
Photovoltaic (PV) systems having rechargeable batteries are prone to be complex and costly because multiple converters are necessary to individually regulate a load, PV panel, and battery. This paper proposes novel nonisolated multiport converters (MPCs) integrating a bidirectional pulsewidth modulation (PWM) converter and phase-shift-switched capacitor converter (PS-SCC) for standalone PV systems. A PWM converter and PS-SCC are integrated by reducing the total switch count, realizing the simpli
Phase separation is a key phenomenon in artificial cell construction. Recent studies have shown that the liquid-liquid phase separation of designed-DNA nanostructures induces the formation of liquid-like condensates that eventually become hydrogels by lowering the solution temperature. As a compartmental capsule is an essential artificial cell structure, many studies have focused on the lateral phase separation of artificial lipid vesicles. However, controlling phase separation using a molecular
Abstract Self‐assembly of designed nanostructures on a lipid membrane offers a powerful approach for enhancing the functionality of its surface. Here, the environment‐dependent assembly of blunt‐ended DNA origami structures on a phase‐separated lipid‐bilayer membrane consisting of liquid‐disordered (Ld) and solid‐ordered (So) phases is reported. Fluorescence microscopy and atomic force microscopy (AFM) imaging reveal that DNA origami structures preferentially bind to the So phase. At higher conc
Liquid-liquid phase separation (LLPS) of biopolymer molecules generates liquid-like droplets. Physical properties such as viscosity and surface tension play important roles in the functions of these droplets. DNA-nanostructure-based LLPS systems provide useful model tools to investigate the influence of molecular design on the physical properties of the droplets, which has so far remained unclear. Herein, we report changes in the physical properties of DNA droplets by sticky end (SE) design in D
The creation of artificial cells is an immensely challenging task in science. Artificial cells contribute to revealing the mechanisms of biological systems and deepening our understanding of them. The progress of versatile biological research fields has clarified many biological phenomena, and various artificial cell models have been proposed in these fields. Microfluidics provides useful technologies for the study of artificial cells because it allows the fabrication of cell-like compartments,
An isothermal amplification circuit for specific DNA molecules was implemented in giant unilamellar vesicles. Using this circuit, over 5000-fold amplification of output DNAs was achieved, and the amplification behaviour depended on the concentration of input signal DNAs in a cell-sized compartment. Moreover, initiation of the amplification by photo-stimulation was demonstrated.
Deoxyribonucleic acid (DNA) nanotechnology, a frontier in biomedical engineering, is an emerging field that has enabled the engineering of molecular-scale DNA materials with applications in biomedicine such as bioimaging, biodetection, and drug delivery over the past decades. The programmability of DNA nanostructures allows the precise engineering of DNA nanocarriers with controllable shapes, sizes, surface chemistries, and functions to deliver therapeutic and functional payloads to target cells
Rapid-single-flux-quantum digital-to-analogue converters (RSFQ-DACs) are now under development for ac voltage standard applications. The voltage multiplier (VM), which precisely amplifies the input voltage, is a key component for RSFQ-DACs. Because the amount of bias current for a conventional VM increases in proportion to its multiplication factor, we have been looking for a VM device which is operated on a different principle. In this paper, we report our design of a 1000-fold VM comprising do
Multi-power-source systems containing multiple power sources have gained considerable attention since the advent of renewable energy sources, electric vehicles, etc. These systems tend to increase complexity and costs because multiple converters in proportion to the number of power sources are required to individually control each source. Multi-port converters (MPCs) that combine multiple converters into a single unit have been reported to achieve simplified systems at lower costs. Most conventi
Recent studies have revealed that liquid-liquid phase separation (LLPS) plays crucial roles in various cellular functions. Droplets formed via LLPS within cells, often referred to as membraneless organelles, serve to concentrate specific molecules, thus enhancing biochemical reactions. Artificial LLPS systems have been utilized to construct synthetic cell models, employing a range of synthetic molecules. LLPS systems based on DNA nanotechnology are particularly notable for their designable chara
The formation of biomolecular condensates via phase separation relates to various cellular functions. Reconstituting these condensates with designed molecules facilitates the exploration of their mechanisms and potential applications. Sequence-designed DNA nanostructures enable the investigation of how structural design influences condensate formation and the construction of functional artificial condensates. Despite the high designability of DNA-based condensates, free nanostructures that do no
Constrained clustering is attracting attention as a useful way for grouping a data set into intended clusters using users' feedback. We develop an interactive document clustering method by employing constrained clustering in order to group patent documents into some technological categories based on their contents. This method aims to progressively improve the accuracy of clustering to repeat both the assigning of appropriate cluster to documents and applying constrained clustering. We evaluate