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Bae Ho

Ewha Womans University · 情報科学

研究室紹介

Professor Bae Ho's research lab specializes in the intersection of artificial intelligence, computational biology, and medical data security. The lab focuses on developing robust machine learning models—particularly ensemble methods and deep neural networks—for drug discovery and biomedical prediction, while addressing critical challenges such as adversarial robustness and privacy preservation in sensitive health data. A key emphasis is placed on enhancing model reliability, interpretability, and security in real-world healthcare applications, especially in hepatitis B treatment and genomic data management. The lab also explores innovative techniques to protect data privacy and defend AI systems against malicious attacks in medical AI systems.

adversarial robustnessQSAR modelingmedical data privacydeep learning securitybiomedical AI

Research Overview

Papers
57
Total Citations
1,191
Papers (5y)
27
Primary Field
情報科学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
27total
2021
2022
2023
2024
2025
Citations per year (5y)
125total
20212022202320242025

Selected Papers

15
1
Article|423 citations·2018
96 weeks treatment of tenofovir alafenamide vs. tenofovir disoproxil fumarate for hepatitis B virus infection
Kosh Agarwal, Maurizia Rossana Brunetto, Wai Kay Seto, Young‐Suk Lim, Scott Fung, Patrick Marcellin, Sang Hoon Ahn, Namiki Izumi, Wan‐Long Chuang, Ho Bae, Manoj Sharma, Harry L.A. Janssen
SJR Q1Journal of HepatologyOA
EpidemiologyMedicine
2
Article|243 citations·2019
Comprehensive ensemble in QSAR prediction for drug discovery
Sunyoung Kwon, Ho Bae, Jeonghee Jo, Sungroh Yoon
SJR Q1BMC BioinformaticsOA

BACKGROUND: Quantitative structure-activity relationship (QSAR) is a computational modeling method for revealing relationships between structural properties of chemical compounds and biological activities. QSAR modeling is essential for drug discovery, but it has many constraints. Ensemble-based machine learning approaches have been used to overcome constraints and obtain reliable predictions. Ensemble learning builds a set of diversified models and combines them. However, the most prevalent app

Computational Theory and MathematicsComputer Science
3
Article|70 citations·2018
Improvement of bone mineral density and markers of proximal renal tubular function in chronic hepatitis B patients switched from tenofovir disoproxil fumarate to tenofovir alafenamide
Tse–Ling Fong, Brian T. Lee, Andy Tien, Mimi Chang, Carolina Lim, Aiden Ahn, Ho Bae
SJR Q2Journal of Viral Hepatitis

Tenofovir alafenamide (TAF) is a novel prodrug that reduces tenofovir plasma levels by 90% compared to tenofovir disoproxil fumarate (TDF), resulting in decreased bone mineral density (BMD) loss and renal toxicity. We aimed to study changes in BMD and markers of renal function of chronic hepatitis B (CHB) patients previously treated with TDF who were switched to TAF in as early as 12 weeks. This was a prospective single-arm open-label study of 75 CHB patients treated with TDF 300 mg daily who we

EpidemiologyMedicine
4
Preprint|58 citations·2018
Security and Privacy Issues in Deep Learning
Ho Bae, Jaehee Jang, Dahuin Jung, Hyemi Jang, Heonseok Ha, Hyungyu Lee, Sungroh Yoon
arXiv (Cornell University)OA

To promote secure and private artificial intelligence (SPAI), we review studies on the model security and data privacy of DNNs. Model security allows system to behave as intended without being affected by malicious external influences that can compromise its integrity and efficiency. Security attacks can be divided based on when they occur: if an attack occurs during training, it is known as a poisoning attack, and if it occurs during inference (after training) it is termed an evasion attack. Po

Artificial IntelligenceComputer Science
5
Article|46 citations·2014
Long-Term Treatment with Tenofovir in Asian-American Chronic Hepatitis B Patients Is Associated with Abnormal Renal Phosphate Handling
Connie Tien, Jason Xu, Linda S. Chan, Mimi Chang, Carolina Lim, Sue Lee, Brian Huh, Shuntaro Shinada, Ho Bae, Tse–Ling Fong
SJR Q2Digestive Diseases and Sciences
Emergency MedicineMedicine
6
Article|37 citations·2019
AnomiGAN: Generative Adversarial Networks for Anonymizing Private Medical Data
Ho Bae, Dahuin Jung, Hyun-Soo Choi, Sungroh Yoon
OA

Typical personal medical data contains sensitive information about individuals. Storing or sharing the personal medical data is thus often risky. For example, a short DNA sequence can provide information that can identify not only an individual, but also his or her relatives. Nonetheless, most countries and researchers agree on the necessity of collecting personal medical data. This stems from the fact that medical data, including genomic data, are an indispensable resource for further research

Artificial IntelligenceComputer Science
7
Article|35 citations·2022
Safety and efficacy of vebicorvir in virologically suppressed patients with chronic hepatitis B virus infection
Man‐Fung Yuen, Kosh Agarwal, Xiaoli Ma, Tuan Nguyen, Eugene R. Schiff, Hie‐Won Hann, Douglas T. Dieterich, Ronald Nahass, James Park, Sing Chan, Steven‐Huy B. Han, Edward Gane
SJR Q1Journal of HepatologyOA

BACKGROUND & AIMS: HBV nucleos(t)ide reverse transcriptase inhibitors (NrtIs) do not completely suppress HBV replication. Previous reports indicate persistent viremia during NrtI treatment despite HBV DNA being undetectable. HBV core inhibitors may enhance viral suppression when combined with NrtIs. This phase II trial (NCT03576066) evaluated the efficacy and safety of the investigational core inhibitor, vebicorvir (VBR), in virologically- suppressed patients on NrtIs. METHODS: Non-cirrhotic, Nr

EpidemiologyMedicine
8
Article|32 citations·2020
Gradient Masking of Label Smoothing in Adversarial Robustness
Hyungyu Lee, Ho Bae, Sungroh Yoon
SJR Q1IEEE AccessOA

Deep neural networks (DNNs) have achieved impressive results in several image classification tasks. However, these architectures are unstable for adversarial examples (AEs) such as inputs crafted by a hardly perceptible perturbation with the intent of causing neural networks to make errors. AEs must be considered to prevent accidents in areas such as unmanned car driving using visual object detection in Internet of Things (IoT) networks. Gaussian noise with label smoothing or logit squeezing can

Artificial IntelligenceComputer Science
9
Article|27 citations·2020
Bone and renal safety profile at 72 weeks after switching to tenofovir alafenamide in chronic hepatitis B patients
Brian T. Lee, Mimi Chang, Carolina Lim, Ho Bae, Tse–Ling Fong
SJR Q3JGH OpenOA

Abstract Background and Aim Tenofovir disoproxil fumarate (TDF) has been efficacious in treating chronic hepatitis B (CHB), but long‐term use is accompanied by a decline in renal function and bone mineral density (BMD). Tenofovir alefanamide (TAF) is a prodrug of tenofovir, with similar efficacy in CHB but with fewer side effects than TDF. Recent studies on patients who underwent the switch from TDF to TAF have shown improved bone and renal profiles from 24 to 48 weeks of follow‐up. Methods This

EpidemiologyMedicine
10
Article|23 citations·2021
PixelSteganalysis: Pixel-Wise Hidden Information Removal With Low Visual Degradation
Dahuin Jung, Ho Bae, Hyun-Soo Choi, Sungroh Yoon
SJR Q1IEEE Transactions on Dependable and Secure Computing

Recently, the field of steganography has experienced rapid developments based on deep learning (DL). DL based steganography distributes secret information over all the available bits of the cover image, thereby posing difficulties in using conventional steganalysis methods to detect, extract or remove hidden secret images. However, our proposed framework is the first to effectively disable covert communications and transactions that use DL based steganography. We propose a DL based steganalysis

Computer Vision and Pattern RecognitionComputer Science
11
Article|22 citations·2015
Durability of Hepatitis B e Antigen Seroconversion in Chronic Hepatitis B Patients Treated with Entecavir or Tenofovir
Tse–Ling Fong, Andy Tien, Kahee J Jo, Danny Chu, Eddie C. Cheung, Edward Mena, Quang-Quoc Phan, Andy Yu, Wafa Mohammed, Andrew Velasco, Vinh-Huy LeDuc, Nickolas Nguyen
SJR Q2Digestive Diseases and SciencesOA
EpidemiologyMedicine
12
Article|21 citations·2020
DNA Privacy: Analyzing Malicious DNA Sequences Using Deep Neural Networks
Ho Bae, Seonwoo Min, Hyun-Soo Choi, Sungroh Yoon
SJR Q2IEEE/ACM Transactions on Computational Biology and BioinformaticsOA

Recent advances in next-generation sequencing technologies have led to the successful insertion of video information into DNA using synthesized oligonucleotides. Several attempts have been made to embed larger data into living organisms. This process of embedding messages is called steganography and it is used for hiding and watermarking data to protect intellectual property. In contrast, steganalysis is a group of algorithms that serves to detect hidden information from covert media. Various me

Computer Vision and Pattern RecognitionComputer Science
13
Article|20 citations·2019
Learning-Based Instantaneous Drowsiness Detection Using Wired and Wireless Electroencephalography
Hyun-Soo Choi, Seonwoo Min, Siwon Kim, Ho Bae, Jee‐Eun Yoon, Inha Hwang, Dana Oh, Chang‐Ho Yun, Sungroh Yoon
SJR Q1IEEE AccessOA

Instantaneous drowsiness (i.e., lapse or micro-sleep) during various activities such as driving or construction causes enormous socioeconomic losses. Thus, a virtuous cycle system that monitors a subject's drowsiness can improve work efficiency and safety. We propose a novel framework to detect instantaneous drowsiness with only a two-second length of electroencephalography (EEG). To achieve reliable performance, we use multitaper power spectral density for feature extraction along with extreme

Experimental and Cognitive PsychologyPsychology
14
Article|18 citations·2021
Learn2Evade: Learning-Based Generative Model for Evading PDF Malware Classifiers
Ho Bae, Younghan Lee, Yo-Han Kim, Uiwon Hwang, Sungroh Yoon, Yunheung Paek
SJR Q1IEEE Transactions on Artificial IntelligenceOA

Recent research has shown that a small perturbation to an input may forcibly change the prediction of a machine learning (ML) model. Such variants are commonly referred to as <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">adversarial examples</i> . Early studies have focused mostly on ML models for image processing and expanded to other applications, including those for malware classification. In this article, we focus on the problem of finding

Signal ProcessingComputer Science
15
Article|11 citations·2018
DNA Steganalysis Using Deep Recurrent Neural Networks
Ho Bae, Byunghan Lee, Sunyoung Kwon, Sungroh Yoon
OA

Recent advances in next-generation sequencing technologies have facilitated the use of deoxyribonucleic acid (DNA) as a novel covert channels in steganography. There are various methods that exist in other domains to detect hidden messages in conventional covert channels. However, they have not been applied to DNA steganography. The current most common detection approaches, namely frequency analysis-based methods, often overlook important signals when directly applied to DNA steganography becaus

Molecular BiologyBiochemistry, Genetics and Molecular Biology

Research Areas

EpidemiologyArtificial IntelligenceComputer Vision and Pattern RecognitionSignal ProcessingMolecular BiologyHepatology

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