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Dongeun Yong

Yonsei University · 生化学・遺伝学・分子生物学

研究室紹介

Professor Dongeun Yong's research lab specializes in antimicrobial resistance, with a focus on the molecular epidemiology and genetic mechanisms of multidrug-resistant Gram-negative bacteria, particularly carbapenem-resistant Enterobacteriaceae, Pseudomonas aeruginosa, and Acinetobacter baumannii. The lab investigates novel resistance genes, including metallo-β-lactamases (MBLs) such as bla(AIM-1) and bla(CMY-4), as well as mobile genetic elements like ISCR1 and integrons that facilitate resistance gene dissemination. They also explore alternative therapeutic strategies, such as phage therapy using lytic phages like Βϕ-R2096, for treating difficult-to-treat infections caused by carbapenem-resistant pathogens. The lab combines molecular diagnostics, genomics, and in vivo infection models to address the global threat of antibiotic resistance.

antimicrobial resistancemetallobeta-lactamasecarbapenem-resistant bacteriaphage therapymobile genetic elements

Research Overview

Papers
504
Total Citations
15,237
Papers (5y)
79
Primary Field
生化学・遺伝学・分子生物学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
79total
2021
2022
2023
2024
2025
Citations per year (5y)
1,299total
20212022202320242025

Selected Papers

15
1
Article|2,414 citations·2009
Characterization of a New Metallo-β-Lactamase Gene, bla NDM-1 , and a Novel Erythromycin Esterase Gene Carried on a Unique Genetic Structure in Klebsiella pneumoniae Sequence Type 14 from India
Dongeun Yong, Mark A. Toleman, Christian G. Giske, Hyun S. Cho, Kristina Sundman, Kyungwon Lee, Timothy R. Walsh
SJR Q1Antimicrobial Agents and ChemotherapyOA

A Swedish patient of Indian origin traveled to New Delhi, India, and acquired a urinary tract infection caused by a carbapenem-resistant Klebsiella pneumoniae strain that typed to the sequence type 14 complex. The isolate, Klebsiella pneumoniae 05-506, was shown to possess a metallo-beta-lactamase (MBL) but was negative for previously known MBL genes. Gene libraries and amplification of class 1 integrons revealed three resistance-conferring regions; the first contained bla(CMY-4) flanked by ISEc

Molecular MedicineBiochemistry, Genetics and Molecular Biology
2
Article|622 citations·2009
Characterization of a new metallo-beta-lactamase gene, bla(NDM-1), and a novel erythromycin esterase gene carried on a unique genetic structure in Klebsiella pneumoniae sequence type 14 from India
Dongeun Yong, Mark A. Toleman, Christian G. Giske, Hyun S. Cho, Kristina Sundman, Kyungwon Lee, Timothy R. Walsh
Molecular MedicineBiochemistry, Genetics and Molecular Biology
3
Article|504 citations·2002
Imipenem-EDTA Disk Method for Differentiation of Metallo-β-Lactamase-Producing Clinical Isolates of Pseudomonas spp. and Acinetobacter spp
Dongeun Yong, Kyungwon Lee, Jong Hwa Yum, Hee Bong Shin, Gian María Rossolini, Yunsop Chong
SJR Q1Journal of Clinical MicrobiologyOA

Rapid detection of metallo-beta-lactamase (MBL)-producing gram-negative bacilli is necessary to prevent their dissemination. The method using a disk with imipenem plus 750 micro g of EDTA differentiated all MBL-producing pseudomonads, and the sensitivity and specificity for acinetobacters were 95.7 and 91.0%, respectively. The imipenem-EDTA disks were stable for 12 and 16 weeks at 4 and -20 degrees C, respectively.

Molecular MedicineBiochemistry, Genetics and Molecular Biology
4
Article|148 citations·2019
Efficacy of bacteriophage treatment against carbapenem-resistant Acinetobacter baumannii in Galleria mellonella larvae and a mouse model of acute pneumonia
Jongsoo Jeon, Jong‐Hwan Park, Dongeun Yong
SJR Q1BMC MicrobiologyOA

The results of this study strongly suggest that phage Βϕ-R2096, a novel A. baumannii lytic phage, could be an alternative antibacterial agent to control CRAB infections. This study is the first report to compare in vivo evaluations (G. mellonella larvae and a mouse acute pneumonia model) of the therapeutic efficacy of a phage against CRAB infections.

EcologyEnvironmental Science
5
Article|123 citations·2002
Imipenem-EDTA disk method for differentiation of metallo-beta-lactamase-producing clinical isolates of Pseudomonas spp. and Acinetobacter spp.
Dongeun Yong, Kyungwon Lee, Jong Hwa Yum, Hee Bong Shin, Gian María Rossolini, Yunsop Chong
Molecular MedicineBiochemistry, Genetics and Molecular Biology
6
Article|98 citations·2012
Genetic and Biochemical Characterization of an Acquired Subgroup B3 Metallo-β-Lactamase Gene, bla AIM-1 , and Its Unique Genetic Context in Pseudomonas aeruginosa from Australia
Dongeun Yong, Mark A. Toleman, Jan Bell, Brett Ritchie, Rachael Pratt, H C Ryley, Timothy R. Walsh
SJR Q1Antimicrobial Agents and ChemotherapyOA

Three clinical Pseudomonas aeruginosa isolates (WCH2677, WCH2813, and WCH2837) isolated from the Women's and Children's Hospital, Adelaide, Australia, produced a metallo-β-lactamase (MBL)-positive Etest result. All isolates were PCR negative for known MBL genes. A gene bank was created, and an MBL gene, designated bla(AIM-1), was cloned and fully characterized. The encoded enzyme, AIM-1, is a group B3 MBL that has the highest level of identity to THIN-B and L1. It is chromosomal and flanked by t

Molecular MedicineBiochemistry, Genetics and Molecular Biology
7
Article|86 citations·2003
High Prevalence of PER-1 Extended-Spectrum β-Lactamase-Producing Acinetobacter spp. in Korea
Dongeun Yong, Jong Hee Shin, Sinyoung Kim, Youngsik Lim, Jong Hwa Yum, Kyungwon Lee, Yunsop Chong, A. Bauernfeind
SJR Q1Antimicrobial Agents and ChemotherapyOA

PER-1, an extended-spectrum beta-lactamase, has been reported only in Europe. We detected PER-1 in 53 of 97 acinetobacters in Korea, mainly in the sputum of intensive care unit patients. Pulsed-field gel electrophoresis analysis suggested that clonal spread had occurred. Only PCR reliably detected PER-1 producers. PER-1 producers may also exist in other Asian countries.

Molecular MedicineBiochemistry, Genetics and Molecular Biology
8
Article|51 citations·2006
Increasing Prevalence and Diversity of Metallo-β-Lactamases in Pseudomonas spp., Acinetobacter spp., and Enterobacteriaceae from Korea
Dongeun Yong, Yeoung Seon Choi, Kyoung Ho Roh, Chang Ki Kim, Younhee Park, Jong Hwa Yum, Kyungwon Lee, Yunsop Chong
SJR Q1Antimicrobial Agents and ChemotherapyOA

Among imipenem-nonsusceptible isolates, acquired metallo-beta-lactamase genes were detected in 36 of 581 (6.2%) Pseudomonas aeruginosa isolates, 42 of 44 (95.4%) other Pseudomonas species, and 136 of 513 (26.5%) Acinetobacter species from 2003 to 2004 at a Korean hospital. Overall, bla(VIM-2)-like genes were the most prevalent and were also detected in Enterobacteriaceae, including Klebsiella pneumoniae.

Molecular MedicineBiochemistry, Genetics and Molecular Biology
9
Article|40 citations·2013
Comparison of matrix-assisted laser desorption ionization–time-of-flight mass spectrometry assay with conventional methods for detection of IMP-6, VIM-2, NDM-1, SIM-1, KPC-1, OXA-23, and OXA-51 carbapenemase-producing Acinetobacter spp., Pseudomonas aeruginosa, and Klebsiella pneumoniae
Wonmok Lee, Hae‐Sun Chung, Yangsoon Lee, Dongeun Yong, Seok Hoon Jeong, Kyungwon Lee, Yunsop Chong
SJR Q2Diagnostic Microbiology and Infectious DiseaseOA
Molecular MedicineBiochemistry, Genetics and Molecular Biology
10
Article|40 citations·2002
Further modification of the Hodge test to screen AmpC β-lactamase (CMY-1)-producing strains of Escherichia coli and Klebsiella pneumoniae
Dongeun Yong, Rojin Park, Jong Hwa Yum, Kyungwon Lee, Eung Chil Choi, Yunsop Chong
SJR Q3Journal of Microbiological MethodsOA
Molecular MedicineBiochemistry, Genetics and Molecular Biology
11
Article|37 citations·2016
Characterization and complete genome sequence analysis of two Myoviral bacteriophages infecting clinical carbapenem‐resistant Acinetobacter baumannii isolates
Jongsoo Jeon, Roshan D’Souza, Nelson Pinto, Choong‐Min Ryu, Joseph Park, Dongeun Yong, Kyungwon Lee
SJR Q2Journal of Applied MicrobiologyOA

In vitro and in silico data showed that these novel Ac. baumannii phages, Βϕ-R1215 and Βϕ-R2315, have potential as antimicrobial alternatives to control CRAB in healthcare settings.

EcologyEnvironmental Science
12
Article|35 citations·2014
Increase in the Prevalence of Carbapenem-ResistantAcinetobacterIsolates and Ampicillin-Resistant Non-TyphoidalSalmonellaSpecies in Korea: A KONSAR Study Conducted in 2011
Dongeun Yong, Hee Bong Shin, Yong Kyun Kim, Ji‐Hyun Cho, Wee Gyo Lee, Gyoung Yim Ha, Tae Yeal Choi, Seok Hoon Jeong, Kyungwon Lee, Yunsop Chong, The KONSAR group
SJR Q2Infection and ChemotherapyOA

The prevalence of MRSA, penicillin G-non-susceptible S. pneumoniae, and ampicillin-resistant E. faecium among clinical isolates tested in laboratories remained high. Multidrug resistance was more prevalent among isolates from ICUs. The prevalence of ceftazidime-resistant and amikacin-resistant K. pneumoniae and amikacin-resistant P. aeruginosa decreased after 2005, while the prevalence of imipenem-resistant Acinetobacter spp. increased.

Molecular MedicineBiochemistry, Genetics and Molecular Biology
13
Article|31 citations·2014
Clonality and Resistome Analysis of KPC-ProducingKlebsiella pneumoniaeStrain Isolated in Korea Using Whole Genome Sequencing
Yangsoon Lee, Bong Soo Kim, Jongsik Chun, Ji Hyun Yong, Yeong Seon Lee, Jung Sik Yoo, Dongeun Yong, Yunsop Chong, Roshan D’Souza, Kenneth S. Thomson, Kyungwon Lee, Yunsop Chong
SJR Q2BioMed Research InternationalOA

We analyzed the whole genome sequence and resistome of the outbreak Klebsiella pneumoniae strain MP14 and compared it with those of K. pneumoniae carbapenemase- (KPC-) producing isolates that showed high similarity in the NCBI genome database. A KPC-2-producing multidrug-resistant (MDR) K. pneumoniae clinical isolate was obtained from a patient admitted to a Korean hospital in 2011. The strain MP14 was resistant to all tested β-lactams including monobactam, amikacin, levofloxacin, and cotrimoxaz

Molecular MedicineBiochemistry, Genetics and Molecular Biology
14
Article|29 citations·2003
In Vitro Activities of DA-7867, a Novel Oxazolidinone, against Recent Clinical Isolates of Aerobic and Anaerobic Bacteria
Dongeun Yong, Jong Hwa Yum, Kyungwon Lee, Yunsop Chong, Sung Choi, Jae Keol Rhee
SJR Q1Antimicrobial Agents and ChemotherapyOA

In vitro activities of DA-7867, a novel oxazolidinone, were compared to those of linezolid and commonly used antimicrobials. DA-7867 had the lowest MIC for 90% of the aerobic gram-positive bacterial strains tested, </=0.25 micro g/ml, and it was more potent than linezolid.

Clinical BiochemistryBiochemistry, Genetics and Molecular Biology
15
Article|28 citations·2010
New cfiA variant and novel insertion sequence elements in carbapenem-resistant Bacteroides fragilis isolates from Korea
Kyoung Ho Roh, Sinyoung Kim, Changki Kim, Jong Hwa Yum, Myung Sook Kim, Dongeun Yong, Seok Hoon Jeong, Kyungwon Lee, June Myung Kim, Yunsop Chong
SJR Q2Diagnostic Microbiology and Infectious DiseaseOA
Clinical BiochemistryBiochemistry, Genetics and Molecular Biology

Research Areas

Molecular MedicineInfectious DiseasesClinical BiochemistryEpidemiologyMolecular BiologyEcology

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