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Jong-Il Kim

Seoul National University · 生化学・遺伝学・分子生物学

研究室紹介

Professor Jong-Il Kim's research spans molecular biology, cancer genetics, and biochemical mechanisms underlying disease and protection. His lab investigates RNA editing in cancer, particularly A-to-I editing in RHOQ transcripts and its impact on RhoQ protein activity and tumor invasion. The lab also explores chemopreventive mechanisms, such as the protective effects of green tea catechins like EGCG against UV-induced skin damage and oxidative stress. Additionally, his work includes enzymatic pathways in natural product biosynthesis, such as the cyclization mechanism in artemisinin precursor formation, and DNA repair systems in extremophilic organisms. These diverse interests converge on understanding molecular mechanisms in disease pathogenesis and chemoprevention.

RNA editingcancer biologychemopreventionDNA repairnatural product biosynthesis

Research Overview

Papers
451
Total Citations
18,994
Papers (5y)
81
Primary Field
生化学・遺伝学・分子生物学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
81total
2021
2022
2023
2024
2025
Citations per year (5y)
1,628total
20212022202320242025

Selected Papers

15
1
Article|1,019 citations·2015
Digenome-seq: genome-wide profiling of CRISPR-Cas9 off-target effects in human cells
Daesik Kim, Sangsu Bae, Jeongbin Park, Eunji Kim, Seokjoong Kim, Hye Ryeong Yu, Jinha Hwang, Jong‐Il Kim, Jin‐Soo Kim, Jin‐Soo Kim, Jin‐Soo Kim
SJR Q1Nature Methods
Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|680 citations·1994
The Sources of Economic Growth of the East Asian Newly Industrialized Countries
Jong‐Il Kim, Lawrence J. Lau
SJR Q1Journal of the Japanese and International Economies
General Economics, Econometrics and FinanceEconomics, Econometrics and Finance
3
Article|345 citations·2009
A highly annotated whole-genome sequence of a Korean individual
Jong‐Il Kim, Young Seok Ju, Hansoo Park, Sheehyun Kim, Seonwook Lee, Jae-Hyuk Yi, Joann Mudge, Neil Miller, Dongwan Hong, Callum J. Bell, Hye-Sun Kim, In-Soon Chung
SJR Q1NatureOA

The genome of an anonymous Korean male has been sequenced using a broad spread of genomic techniques. This combinatorial approach allows for detailed characterization of sequence and structural variation. The first four individual genomes to have been determined spanned three distinct ethnic groups: a Yoruba African, northwest European (Craig Venter and James Watson) and Han Chinese. This new work, together with another Korean sequence reported elsewhere, adds the Altaic ethnic grouping to the l

GeneticsBiochemistry, Genetics and Molecular Biology
4
Article|145 citations·2014
RNA editing in RHOQ promotes invasion potential in colorectal cancer
Sae‐Won Han, Hwang-Phill Kim, Jong-Yeon Shin, Eun-Goo Jeong, Won‐Chul Lee, Keon Young Kim, Sang Youn Park, Dae‐Won Lee, Jae‐Kyung Won, Seung‐Yong Jeong, Kyu Joo Park, Jae‐Gahb Park
SJR Q1The Journal of Experimental MedicineOA

RNA editing can increase RNA sequence variation without altering the DNA sequence. By comparing whole-genome and transcriptome sequence data of a rectal cancer, we found novel tumor-associated increase of RNA editing in ras homologue family member Q (RHOQ) transcripts. The adenosine-to-inosine (A-to-I) editing results in substitution of asparagine with serine at residue 136. We observed a higher level of the RHOQ RNA editing in tumor compared with normal tissue in colorectal cancer (CRC). The de

Molecular BiologyBiochemistry, Genetics and Molecular Biology
5
Article|135 citations·2001
Protective Effects of (–)-Epigallocatechin-3-Gallate on UVA- and UVB-Induced Skin Damage
Jong‐Il Kim, Jae Sung Hwang, Youn-Ki Cho, Yongku Han, Young Jin Jeon, Kyu‐Hwan Yang
SJR Q1Skin Pharmacology and Physiology

It has been known that green tea and its components possess significant chemopreventive effects against chemical carcinogens and photo-caused skin tumor formation. In this study, the protective effects of (-)-epigallocatechin-3-gallate (EGCG), a major green tea catechin, on the ultraviolet (UV)-induced skin damage (photoaging) were studied in guinea pigs, hairless mice and human dermal fibroblast cultures. The lipid peroxidation was significantly reduced in the EGCG-treated group. The amount of

DermatologyMedicine
6
Article|127 citations·2013
Primary resistance to epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors (TKIs) in patients with non-small-cell lung cancer harboring TKI-sensitive EGFR mutations: an exploratory study
Jake June-Koo Lee, Jong Yeon Shin, Su‐Hyeon Kim, S. Lee, C. Park, Kim J, Youngil Koh, Bhumsuk Keam, Hye Sook Min, T. M. Kim, Yoon Kyung Jeon, Dongwook Kim
SJR Q1Annals of OncologyOA
Pulmonary and Respiratory MedicineMedicine
7
Article|121 citations·1996
The Sources of Asian Pacific Economic Growth
Jong‐Il Kim, Lawrence J. Lau
SJR Q2Canadian Journal of Economics/Revue canadienne d économique

Jong-Il Kim, Lawrence J. Lau, The Sources of Asian Pacific Economic Growth, The Canadian Journal of Economics / Revue canadienne d'Economique, Vol. 29, Special Issue: Part 2 (Apr., 1996), pp. S448-S454

Economics and EconometricsEconomics, Econometrics and Finance
8
Article|100 citations·2012
Anti-CD45RB/Anti-TIM-1-Induced Tolerance Requires Regulatory B Cells
K.M. Lee, Jong‐Il Kim, Ryan Stott, Julie Soohoo, M.R. O’Connor, Heidi Yeh, Gaoping Zhao, Philip Eliades, C H Fox, Nan Cheng, Shaoping Deng, James F. Markmann
SJR Q1American Journal of TransplantationOA
ImmunologyImmunology and Microbiology
9
Article|95 citations·2002
The RecA proteins of Deinococcus radiodurans and Escherichia coli promote DNA strand exchange via inverse pathways
Jong‐Il Kim, Michael M. Cox
SJR Q1Proceedings of the National Academy of SciencesOA

The RecA protein of Escherichia coli, and all filament-forming homologues identified to date, promote DNA strand exchange by a common, ordered pathway. A filament is first formed on single-stranded DNA, followed by uptake of the duplex substrate. These proteins are thereby targeted to single-strand gaps and tails where recombinational DNA repair is required. The observed course of DNA strand exchange promoted by the RecA protein from the extremely radioresistant bacterium Deinococcus radiodurans

Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
Article|91 citations·2017
Genome-wide association and expression quantitative trait loci studies identify multiple susceptibility loci for thyroid cancer
Ho‐Young Son, Yul Hwangbo, Seong‐Keun Yoo, Sun-Wha Im, San‐Duk Yang, Soo-Jung Kwak, Min Seon Park, Soo Heon Kwak, Sun Wook Cho, Junsun Ryu, Jeongseon Kim, Yuh‐Seog Jung
SJR Q1Nature CommunicationsOA

Abstract Thyroid cancer is the most common cancer in Korea. Several susceptibility loci of differentiated thyroid cancer (DTC) were identified by previous genome-wide association studies (GWASs) in Europeans only. Here we conducted a GWAS and a replication study in Koreans using a total of 1,085 DTC cases and 8,884 controls, and validated these results using expression quantitative trait loci (eQTL) analysis and clinical phenotypes. The most robust associations were observed in the NRG1 gene (rs

Endocrinology, Diabetes and MetabolismMedicine
11
Article|89 citations·2006
Molecular, biochemical and histochemical characterization of two acetylcholinesterase cDNAs from the German cockroach Blattella germanica
Jong‐Il Kim, Carla S. Jung, Young Ho Koh, Sang Hee Lee
SJR Q1Insect Molecular Biology

Full length cDNAs encoding two acetylcholinesterases (AChEs; Bgace1 and Bgace2) were cloned and characterized from the German cockroach, Blattella germanica. Sequence analyses showed that both genes possess all the typical features of ace, and that Bgace1 is orthologous to the insect ace1 whereas Bgace2 is to the insect ace2. Transcript level of Bgace1 was significantly higher (c. 10 fold) than that of Bgace2 in all 11 tissues examined, suggesting that Bgace1 likely encodes a predominant AChE. M

PharmacologyMedicine
12
Article|83 citations·2018
MicroRNA Expression Profiles in Gastric Carcinogenesis
Jinha Hwang, Byung‐Hoon Min, Jiryeon Jang, So Young Kang, Hyunsik Bae, Se Song Jang, Jong‐Il Kim, Kyoung‐Mee Kim
SJR Q1Scientific ReportsOA

Intestinal-type gastric carcinoma exhibits a multistep carcinogenic sequence from adenoma to carcinoma with a gradual increase in genomic alterations. But the roles of microRNAs (miRNA) in this multistage cascade are not fully explored. To identify differentially expressed miRNA (DEM) during early gastric carcinogenesis, we performed miRNA microarray profiling with 24 gastric cancers and precursor lesions (7 early gastric cancer [EGC], 3 adenomas with high-grade dysplasia, 4 adenomas with low-gr

Cancer ResearchBiochemistry, Genetics and Molecular Biology
13
Article|78 citations·2002
RecA Protein from the Extremely Radioresistant Bacterium Deinococcus radiodurans : Expression, Purification, and Characterization
Jong‐Il Kim, Ajay Sharma, Stephen N. Abbott, Elizabeth A. Wood, David Dwyer, Aaron Jambura, Kenneth W. Minton, Ross B. Inman, Michael J. Daly, Michael M. Cox
SJR Q2Journal of BacteriologyOA

The RecA protein of Deinococcus radiodurans (RecA(Dr)) is essential for the extreme radiation resistance of this organism. The RecA(Dr) protein has been cloned and expressed in Escherichia coli and purified from this host. In some respects, the RecA(Dr) protein and the E. coli RecA (RecA(Ec)) proteins are close functional homologues. RecA(Dr) forms filaments on single-stranded DNA (ssDNA) that are similar to those formed by the RecA(Ec). The RecA(Dr) protein hydrolyzes ATP and dATP and promotes

Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Article|78 citations·2008
Vitisin A inhibits adipocyte differentiation through cell cycle arrest in 3T3-L1 cells
Jong‐Il Kim, Hee-Sook Park, Myoung‐Su Lee, Yong‐Jin Cho, Young-Sup Kim, Jin‐Taek Hwang, Mi Jeong Sung, Myung‐Sunny Kim, Dae Young Kwon
SJR Q2Biochemical and Biophysical Research Communications
Geriatrics and GerontologyMedicine
15
Article|78 citations·2013
Effects of a web-based stroke education program on recurrence prevention behaviors among stroke patients: a pilot study
Jong‐Il Kim, Shaun Wen Huey Lee, Ji Hyun Kim, Ji Hyun Kim, Ji Hyun Kim
SJR Q1Health Education ResearchOA

The effectiveness of methods to prevent stroke recurrence and of education focusing on learners' needs has not been fully explored. The aims of this study were to assess the effects of such interventions among stroke patients and their primary caregivers and to evaluate the feasibility of a web-based stroke education program. The participants were 36 patients with a clinical diagnosis of ischemic stroke within 12 months post-stroke and their primary caregivers. The participants were randomly ass

RehabilitationMedicine

Research Areas

Molecular BiologyGeneticsOncologyCancer ResearchPulmonary and Respiratory MedicineSurgery

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