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Min Ji Choi

Yonsei University · 医学

研究室紹介

Professor Min Ji Choi's research lab specializes in clinical mycology and antimicrobial resistance, with a focus on the molecular epidemiology, antifungal resistance mechanisms, and genetic characterization of clinically important yeast pathogens such as *Candida auris*, *C. parapsilosis*, *C. tropicalis*, and *C. glabrata*. The lab investigates resistance mechanisms including gene overexpression (e.g., *CDR1*, *MDR1*, *ERG11*) and mutations (e.g., in *ERG11*, *UPC2*, *msh2*), and employs molecular typing methods like microsatellite and MLST to track clonal transmission and persistence in healthcare settings. Their work integrates clinical data with advanced molecular diagnostics, including MALDI-TOF MS, to improve pathogen identification and infection control strategies in hospital environments.

antifungal resistanceCandida speciesmolecular epidemiologyazole resistanceMALDI-TOF MS

Research Overview

Papers
48
Total Citations
842
Papers (5y)
21
Primary Field
医学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
21total
2021
2022
2023
2024
2026
Citations per year (5y)
198total
20212022202320242026

Selected Papers

15
1
Article|139 citations·2019
Candida auris Clinical Isolates from South Korea: Identification, Antifungal Susceptibility, and Genotyping
Yong Jun Kwon, Jong Hee Shin, Seung A. Byun, Min Ji Choi, Eun Jeong Won, Dain Lee, Seung Yeob Lee, Sejong Chun, Jun Hyung Lee, Hyun‐Jung Choi, Seung Jung Kee, Soo Hyun Kim
SJR Q1Journal of Clinical MicrobiologyOA

Candida auris is an emerging worldwide fungal pathogen. Over the past 20 years, 61 patient isolates of C. auris (4 blood and 57 ear) have been obtained from 13 hospitals in Korea.

Infectious DiseasesMedicine
2
letter|86 citations·2018
Fluconazole-Resistant Candida parapsilosis Bloodstream Isolates with Y132F Mutation in ERG11 Gene, South Korea
Yong Jun Choi, Yae‐Jean Kim, Dongeun Yong, Jung‐Hyun Byun, Taek Soo Kim, Yun Sil Chang, Min Ji Choi, Seung Ah Byeon, Eun Jeong Won, Soo Hyun Kim, Myung‐Geun Shin, Jong Hee Shin
SJR Q1Emerging infectious diseasesOA

We recently observed the emergence of fluconazole-resistant Candida parapsilosis bloodstream isolates harboring a Y132F substitution in Erg11p in South Korea. These Y132F isolates had a higher propensity to cause clonal transmission than other fluconazole-resistant isolates and persisted within hospitals for several years, as revealed by microsatellite typing.

Infectious DiseasesMedicine
3
Article|77 citations·2016
Resistance Mechanisms and Clinical Features of Fluconazole-Nonsusceptible Candida tropicalis Isolates Compared with Fluconazole-Less-Susceptible Isolates
Min Ji Choi, Eun Jeong Won, Jong Hee Shin, Soo Hyun Kim, Wee-Gyo Lee, Mi‐Na Kim, Kyungwon Lee, Myung‐Geun Shin, Soon‐Pal Suh, Dong Wook Ryang, Young Jun Im
SJR Q1Antimicrobial Agents and ChemotherapyOA

We investigated the azole resistance mechanisms and clinical features of fluconazole-nonsusceptible (FNS) isolates of Candida tropicalis recovered from Korean surveillance cultures in comparison with fluconazole-less-susceptible (FLS) isolates. Thirty-five clinical isolates of C. tropicalis, comprising 9 FNS (fluconazole MIC, 4 to 64 μg/ml), 12 FLS (MIC, 1 to 2 μg/ml), and 14 control (MIC, 0.125 to 0.5 μg/ml) isolates, were assessed. CDR1, MDR1, and ERG11 expression was quantified, and the ERG11

Infectious DiseasesMedicine
4
Article|50 citations·2021
Fluconazole-Resistant Candida glabrata Bloodstream Isolates, South Korea, 2008–2018
Eun Jeong Won, Min Ji Choi, Mi‐Na Kim, Dongeun Yong, Wee Gyo Lee, Young Uh, Taek Soo Kim, Seung Ah Byeon, Seung Yeob Lee, Soo Hyun Kim, Jong Hee Shin
SJR Q1Emerging infectious diseasesOA

Medscape, LLC designates this Journal-based CME activity for a maximum of 1.00 AMA PRA Category 1 Credit(s). Physicians should claim only the credit commensurate with the extent of their participation in the activity.

Infectious DiseasesMedicine
5
Article|50 citations·2018
Multilocus Sequence Typing (MLST) Genotypes of Candida glabrata Bloodstream Isolates in Korea: Association With Antifungal Resistance, Mutations in Mismatch Repair Gene (Msh2), and Clinical Outcomes
Seung A. Byun, Eun Jeong Won, Mi‐Na Kim, Wee Gyo Lee, Kyungwon Lee, Hye Soo Lee, Young Uh, Kelley R. Healey, David S. Perlin, Min Ji Choi, Soo Hyun Kim, Jong Hee Shin
SJR Q1Frontiers in MicrobiologyOA

<i>Candida glabrata</i> bloodstream infection (BSI) isolates from a particular geographic area have been reported to comprise a relatively small number of the major sequence types (STs) by multilocus sequence typing (MLST) analysis. Yet little is known about the characteristics of major ST strains of <i>C. glabrata</i>. To address this question in Korea, we investigated antifungal resistance and non-synonymous mutations of the mismatch repair gene (<i>msh2</i> mutations) in <i>C. glabrata</i> BS

Infectious DiseasesMedicine
6
Article|48 citations·2017
Comparison of the Bruker Biotyper and VITEK MS Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry Systems Using a Formic Acid Extraction Method to Identify Common and Uncommon Yeast Isolates
Hyunseung Lee, Jong Hee Shin, Min Ji Choi, Eun Jeong Won, Seung Jung Kee, Soo Hyun Kim, Myung‐Geun Shin, Soon‐Pal Suh
SJR Q2Annals of Laboratory MedicineOA

BACKGROUND: Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) allows rapid and accurate identification of clinical yeast isolates. In-tube formic acid/acetonitrile (FA/ACN) extraction is recommended prior to the analysis with MALDI Biotyper, but the direct on-plate FA extraction is simpler. We compared the Biotyper with the VITEK MS for the identification of various clinically relevant yeast species, focusing on the use of the FA extraction method. METHO

Clinical BiochemistryBiochemistry, Genetics and Molecular Biology
7
Article|38 citations·2015
Antifungal Susceptibilities of Bloodstream Isolates of Candida Species from Nine Hospitals in Korea: Application of New Antifungal Breakpoints and Relationship to Antifungal Usage
Eun Jeong Won, Jong Hee Shin, Min Ji Choi, Wee Gyo Lee, Yeon-Joon Park, Young Uh, Shine-Young Kim, Mi‐Kyung Lee, Soo Hyun Kim, Myung‐Geun Shin, Soon‐Pal Suh, Dong Wook Ryang
SJR Q1PLoS ONEOA

We applied the new clinical breakpoints (CBPs) of the Clinical and Laboratory Standards Institute (CLSI) to a multicenter study to determine the antifungal susceptibility of bloodstream infection (BSI) isolates of Candida species in Korea, and determined the relationship between the frequency of antifungal-resistant Candida BSI isolates and antifungal use at hospitals. Four hundred and fifty BSI isolates of Candida species were collected over a 1-year period in 2011 from nine hospitals. The susc

Infectious DiseasesMedicine
8
Article|32 citations·2015
Molecular Identification and Amphotericin B Susceptibility Testing of Clinical Isolates of Aspergillus From 11 Hospitals in Korea
Min Seok Heo, Jong Hee Shin, Min Ji Choi, Yeon-Joon Park, Hye Soo Lee, Sun Hoe Koo, Won Gil Lee, Soo Hyun Kim, Myung‐Geun Shin, Soon‐Pal Suh, Dong‐Wook Ryang
SJR Q2Annals of Laboratory MedicineOA

BACKGROUND: We investigated the species distribution and amphotericin B (AMB) susceptibility of Korean clinical Aspergillus isolates by using two Etests and the CLSI broth microdilution method. METHODS: A total of 136 Aspergillus isolates obtained from 11 university hospitals were identified by sequencing the internal transcribed spacer (ITS) and β-tubulin genomic regions. Minimal inhibitory concentrations (MICs) of AMB were determined in Etests using Mueller-Hinton agar (Etest-MH) and RPMI agar

Infectious DiseasesMedicine
9
Article|25 citations·2021
Dynamics and Predictors of Mortality Due to Candidemia Caused by Different Candida Species: Comparison of Intensive Care Unit-Associated Candidemia (ICUAC) and Non-ICUAC
Yong Jun Kwon, Eun Jeong Won, Seok Hoon Jeong, Kyeong Seob Shin, Jeong Hwan Shin, Jeong Hwan Shin, Young Ree Kim, Hyun Soo Kim, Young Ah Kim, Young Uh, Taek Soo Kim, Jae Hyeon Park
SJR Q1Journal of FungiOA

We investigated mortality and predictors of mortality due to intensive care unit-associated candidemia (ICUAC) versus non-ICUAC by Candida species. This study included all candidemia cases in 11 hospitals from 2017 to 2018 in South Korea. The all-cause mortality rates in all 370 patients with ICUAC were approximately twofold higher than those in all 437 patients with non-ICUAC at 7 days (2.3-fold, 31.1%/13.3%), 30 days (1.9-fold, 49.5%/25.4%), and 90 days (1.9-fold, 57.8%/30.9%). Significant spe

Infectious DiseasesMedicine
10
Article|23 citations·2016
Evaluation of matrix-assisted laser desorption/ionization time-of-fight mass spectrometry for identification of 345 clinical isolates of Aspergillus species from 11 Korean hospitals: comparison with molecular identification
Joo-Heon Park, Jong Hee Shin, Min Ji Choi, Jin Un Choi, Yeon-Joon Park, Sook Jin Jang, Eun Jeong Won, Soo Hyun Kim, Seung Jung Kee, Myung‐Geun Shin, Soon‐Pal Suh
SJR Q2Diagnostic Microbiology and Infectious Disease
Clinical BiochemistryBiochemistry, Genetics and Molecular Biology
11
Article|22 citations·2012
Fragment-based discovery of novel and selective mPGES-1 inhibitors Part 1: Identification of sulfonamido-1,2,3-triazole-4,5-dicarboxylic acid
Kijae Lee, Van Chung Pham, Min Ji Choi, Kyung Ju Kim, Kyung‐Tae Lee, Seong‐Gu Han, Yeon Gyu Yu, Jae Yeol Lee
SJR Q2Bioorganic & Medicinal Chemistry LettersOA
PharmacologyMedicine
12
Article|21 citations·2019
Microsatellite Typing and Resistance Mechanism Analysis of Voriconazole-Resistant Aspergillus flavus Isolates in South Korean Hospitals
Min Ji Choi, Eun Jeong Won, Min Young Joo, Yeon-Joon Park, Soo Hyun Kim, Myung‐Geun Shin, Jong Hee Shin
SJR Q1Antimicrobial Agents and ChemotherapyOA

A recent surveillance study in South Korea revealed that 14% (7/50) of Aspergillus flavus clinical isolates had a voriconazole minimum inhibitory concentration of ≥4 μg/ml. Of seven non-wild-type (non-WT) isolates, six ear isolates from four hospitals shared the same microsatellite genotype.

Infectious DiseasesMedicine
13
Article|21 citations·2022
Evolution of Fluconazole Resistance Mechanisms and Clonal Types of Candida parapsilosis Isolates from a Tertiary Care Hospital in South Korea
Tae Yeul Kim, Hee Jae Huh, Ga Yeong Lee, Min Ji Choi, Hui‐Jin Yu, Sun Young Cho, Yun Sil Chang, Yae‐Jean Kim, Jong Hee Shin, Nam Yong Lee
SJR Q1Antimicrobial Agents and ChemotherapyOA

We investigated the evolution of fluconazole resistance mechanisms and clonal types of Candida parapsilosis isolates from a tertiary care hospital in South Korea. A total of 45 clinical isolates, including 42 collected between 2017 and 2021 and 3 collected between 2012 and 2013, were subjected to antifungal susceptibility testing, sequencing of fluconazole resistance genes ( ERG11 , CDR1 , TAC1 , and MRR1 ), and microsatellite typing.

Infectious DiseasesMedicine
14
Article|19 citations·2022
Nationwide Surveillance of Antifungal Resistance of Candida Bloodstream Isolates in South Korean Hospitals: Two Year Report from Kor-GLASS
Eun Jeong Won, Min Ji Choi, Seok Hoon Jeong, Dokyun Kim, Kyeong Seob Shin, Jeong Hwan Shin, Young Ree Kim, Hyun Soo Kim, Young Ah Kim, Young Uh, Nam Hee Ryoo, Jeong Su Park
SJR Q1Journal of FungiOA

We incorporated nationwide Candida antifungal surveillance into the Korea Global Antimicrobial Resistance Surveillance System (Kor-GLASS) for bacterial pathogens. We prospectively collected and analyzed complete non-duplicate blood isolates and information from nine sentinel hospitals during 2020−2021, based on GLASS early implementation protocol for the inclusion of Candida species. Candida species ranked fourth among 10,758 target blood pathogens and second among 4050 hospital-origin blood pat

Infectious DiseasesMedicine
15
Article|18 citations·2020
Evaluation of Two Commercial Broth Microdilution Methods Using Different Interpretive Criteria for the Detection of Molecular Mechanisms of Acquired Azole and Echinocandin Resistance in Four Common Candida Species
Ha Jin Lim, Jong Hee Shin, Mi‐Na Kim, Dongeun Yong, Seung A. Byun, Min Ji Choi, Seung Yeob Lee, Eun Jeong Won, Seung‐Jung Kee, Soo Hyun Kim, Myung‐Geun Shin
SJR Q1Antimicrobial Agents and ChemotherapyOA

The abilities of the new Vitek 2 AST-YS08 (YS08) and Sensititre YeastOne (SYO) systems to detect the resistances of Candida isolates to azoles and echinocandins were evaluated. In total, 292 isolates, including 28 Candida albicans (6 Erg11 and 2 Fks mutants), 57 Candida parapsilosis (26 Erg11 mutants), 24 Candida tropicalis (10 Erg11 and 1 Fks mutants), and 183 Candida glabrata (39 Pdr1 and 13 Fks mutants) isolates, were tested.

Infectious DiseasesMedicine

Research Areas

Infectious DiseasesClinical BiochemistryImmunologyPharmacologyInsect ScienceOphthalmology

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