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Sathishkumar Natarajan

Kyung Hee University · 生化学・遺伝学・分子生物学

研究室紹介

Professor Sathishkumar Natarajan's research lab specializes in computational and systems biology approaches to understand disease mechanisms and plant stress responses. The lab focuses on identifying molecular targets and natural compounds for cancer therapy, particularly through in silico drug docking with anti-apoptotic proteins and ginsenosides. It also investigates genetic and molecular mechanisms underlying plant resistance to pathogens and abiotic stresses, such as clubroot disease in Brassica and cold stress responses mediated by glutathione transferases. The integration of bioinformatics, structural biology, and functional genomics defines the lab’s interdisciplinary research direction.

cancer therapeuticsginsenosidesplant pathologystress responsein silico drug docking

Research Overview

Papers
91
Total Citations
1,884
Papers (5y)
20
Primary Field
生化学・遺伝学・分子生物学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
20total
2021
2022
2023
2024
2025
Citations per year (5y)
336total
20212022202320242025

Selected Papers

15
1
Article|177 citations·2023
Classification of benign and malignant subtypes of breast cancer histopathology imaging using hybrid CNN-LSTM based transfer learning
Mahati Munikoti Srikantamurthy, V.P. Subramanyam Rallabandi, Dawood B. Dudekula, Sathishkumar Natarajan, Junhyung Park
SJR Q2BMC Medical ImagingOA

BACKGROUND: Grading of cancer histopathology slides requires more pathologists and expert clinicians as well as it is time consuming to look manually into whole-slide images. Hence, an automated classification of histopathological breast cancer sub-type is useful for clinical diagnosis and therapeutic responses. Recent deep learning methods for medical image analysis suggest the utility of automated radiologic imaging classification for relating disease characteristics or diagnosis and patient s

Artificial IntelligenceComputer Science
2
Review|115 citations·2018
Traditional oriental medicine for sensorineural hearing loss: Can ethnopharmacology contribute to potential drug discovery?
Rodrigo Castañeda-Miranda, Sathishkumar Natarajan, Seo Yule Jeong, Bin Na Hong, Tong Ho Kang
SJR Q1Journal of Ethnopharmacology
Plant ScienceAgricultural and Biological Sciences
3
Article|92 citations·2011
Molecular docking studies of anti-apoptotic BCL-2, BCL-XL, and MCL-1 proteins with ginsenosides from Panax ginseng
Sathishkumar Natarajan, Sathiyamoorthy Subramaniyam, Ramya Mathiyalagan, Dong‐Uk Yang, Hee Nyeong Lee, Deok‐Chun Yang
SJR Q2Journal of Enzyme Inhibition and Medicinal ChemistryOA

Anti-apoptotic proteins such as BCL-2, BCL-XL and MCL-1 bind with pro-apoptotic proteins to induce apoptosis mechanism. BCL-2 family proteins are key regulators of apoptosis process. Over expression of these anti-apoptotic proteins lead to several cancers by preventing apoptosis. A number of studies revealed that ginseng derivatives reduce tumor growth. Ginseng, the most valuable medicinal herb found in eastern Asia belongs to Araliaceae family. In this study, docking simulations were performed

Molecular BiologyBiochemistry, Genetics and Molecular Biology
4
Article|87 citations·2019
Mapping of a novel clubroot resistance QTL using ddRAD-seq in Chinese cabbage (Brassica rapa L.)
Rawnak Laila, Jong‐In Park, Arif Hasan Khan Robin, Sathishkumar Natarajan, Harshavardhanan Vijayakumar, Kenta Shirasawa, Sachiko Isobe, Hoy‐Taek Kim, Ill–Sup Nou
SJR Q1BMC Plant BiologyOA

Plasmodiophora brassicae is a soil-borne plant pathogen that causes clubroot disease, which results in crop yield loss in cultivated Brassica species. Here, we investigated whether a quantitative trait locus (QTL) in B. rapa might confer resistance to a Korean P. brassicae pathotype isolate, Seosan. We crossed resistant and susceptible parental lines and analyzed the segregation pattern in a F 2 population of 348 lines. We identified and mapped a novel clubroot resistance QTL using the same mapp

Plant ScienceAgricultural and Biological Sciences
5
Review|80 citations·2013
Ginseng saponins and the treatment of osteoporosis: mini literature review
Muhammad Hanif Siddiqi, Muḥammad Zubair Ṣiddiqi, Sungeun Ahn, Sera Kang, Yeon-Ju Kim, Sathishkumar Natarajan, Dong‐Uk Yang, Deok‐Chun Yang
SJR Q1Journal of Ginseng ResearchOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
6
Article|69 citations·2016
Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea
Harshavardhanan Vijayakumar, Senthil Kumar Thamilarasan, Ashokraj Shanmugam, Sathishkumar Natarajan, Hee‐Jeong Jung, Jong‐In Park, Hyeran Kim, Mi-Young Chung, Ill–Sup Nou
SJR Q1International Journal of Molecular SciencesOA

Plants, as sessile organisms, can suffer serious growth and developmental consequences under cold stress conditions. Glutathione transferases (GSTs, EC 2.5.1.18) are ubiquitous and multifunctional conjugating proteins, which play a major role in stress responses by preventing oxidative damage by reactive oxygen species (ROS). Currently, understanding of their function(s) during different biochemical and signaling pathways under cold stress condition remain unclear. In this study, using combined

Molecular BiologyBiochemistry, Genetics and Molecular Biology
7
Review|56 citations·2021
Molecular Insights of Fruit Quality Traits in Peaches, Prunus persica
Karpagam Veerappan, Sathishkumar Natarajan, Hoyong Chung, Junhyung Park
SJR Q1PlantsOA

Fleshy fruits are the most demanded fruits because of their organoleptic qualities and nutritional values. The genus Prunus is a rich source of diversified stone/drupe fruits such as almonds, apricots, plums, sweet cherries, peaches, and nectarines. The fruit-ripening process in Prunus involves coordinated biochemical and physiological changes resulting in changes in fruit texture, aroma gain, color change in the pericarp, sugar/organic acid balance, fruit growth, and weight gain. There are diff

Plant ScienceAgricultural and Biological Sciences
8
Article|55 citations·2014
Ginsenoside F2 possesses anti-obesity activity via binding with PPARγ and inhibiting adipocyte differentiation in the 3T3-L1 cell line
Fayeza Md. Siraj, Sathishkumar Natarajan, Yeon Ju Kim, Se Young Kim, Deok‐Chun Yang
SJR Q2Journal of Enzyme Inhibition and Medicinal Chemistry

Abstract Panax ginseng Meyer has been shown to be effective in mitigating various diseases. Protopanaxadiols (PPD) and protopanaxatriols (PPT), which are the main constituents of ginseng, have been shown to impact obesity. Therefore, we selected several important ginsenosides to perform our docking study and determine if they had binding affinity with the peroxisome proliferator activated receptor gamma (PPARγ), which is a major transcription factor in adipocytes. Among them, only a few ginsenos

Molecular BiologyBiochemistry, Genetics and Molecular Biology
9
Article|51 citations·2018
In silico and in vitro analysis of coumarin derivative induced anticancer effects by undergoing intrinsic pathway mediated apoptosis in human stomach cancer
Haribalan Perumalsamy, Sankarapandian Karuppasamy, Karpagam Veerappan, Sathishkumar Natarajan, Narendran Kandaswamy, Lakshmi Thangavelu, Sri Renukadevi Balusamy
SJR Q1Phytomedicine
ToxicologyPharmacology, Toxicology and Pharmaceutics
10
Article|51 citations·2020
Transcriptome Analysis by RNA–Seq Reveals Genes Related to Plant Height in Two Sets of Parent-hybrid Combinations in Easter lily (Lilium longiflorum)
Jewel Howlader, Arif Hasan Khan Robin, Sathishkumar Natarajan, Manosh Kumar Biswas, Kanij Rukshana Sumi, Cheon Young Song, Jong‐In Park, Ill–Sup Nou
SJR Q1Scientific ReportsOA

In this study, two different hybrids of Easter lily (Lilium longiflorum), obtained from two cross combinations, along with their four parents were sequenced by high-throughput RNA-sequencing (RNA-Seq) to find out differentially expressed gene in parent-hybrid combinations. The leaf mRNA profiles of two hybrids and their four parents were RNA-sequenced with a view to identify the potential candidate genes related to plant height heterosis. In both cross combinations, based to morphological traits

Molecular BiologyBiochemistry, Genetics and Molecular Biology
11
Article|50 citations·2013
Identification of BACE1 inhibitors from Panax ginseng saponins—An Insilco approach
Karpagam Veerappan, Sathishkumar Natarajan, Sathiyamoorthy Subramaniyam, Periannan Rasappan, Shila Samuel, Yeon-Ju Kim, Deok‐Chun Yang
SJR Q1Computers in Biology and Medicine
PhysiologyMedicine
12
Article|45 citations·2013
Insilico profiling of microRNAs in Korean ginseng (Panax ginseng Meyer)
Ramya Mathiyalagan, Sathiyamoorthy Subramaniyam, Sathishkumar Natarajan, Yeon Ju Kim, Myung Suk Sun, Se Young Kim, Yu‐Jin Kim, Deok‐Chun Yang
SJR Q1Journal of Ginseng ResearchOA
Plant ScienceAgricultural and Biological Sciences
13
Article|43 citations·2016
Whole Genome Re-Sequencing and Characterization of Powdery Mildew Disease-Associated Allelic Variation in Melon
Sathishkumar Natarajan, Hoy‐Taek Kim, Senthil Kumar Thamilarasan, Karpagam Veerappan, Jong‐In Park, Ill–Sup Nou
SJR Q1PLoS ONEOA

Powdery mildew is one of the most common fungal diseases in the world. This disease frequently affects melon (Cucumis melo L.) and other Cucurbitaceous family crops in both open field and greenhouse cultivation. One of the goals of genomics is to identify the polymorphic loci responsible for variation in phenotypic traits. In this study, powdery mildew disease assessment scores were calculated for four melon accessions, 'SCNU1154', 'Edisto47', 'MR-1', and 'PMR5'. To investigate the genetic varia

GeneticsBiochemistry, Genetics and Molecular Biology
14
Article|42 citations·2015
Inhibition of Osteoclast Differentiation by Ginsenoside Rg3 in RAW264.7 Cells via RANKL, JNK and p38 MAPK Pathways Through a Modulation of Cathepsin K: An In Silico and In Vitro Study
Muhammad Hanif Siddiqi, Muḥammad Zubair Ṣiddiqi, Sera Kang, Hae Yong Noh, Sungeun Ahn, Shakina Yesmin Simu, Mohamed Antar Aziz, Sathishkumar Natarajan, Zuly Elizabeth Jiménez Pérez, Deok‐Chun Yang
SJR Q1Phytotherapy Research

Various studies have demonstrated that overexpression of cathepsin K (Cat-K) causes excessive bone loss, which ultimately leads to a variety of bone diseases including osteoporosis. Therefore, inhibition of Cat-K signifies a potential therapeutic target in osteoporosis treatment. Ginsenoside Rg3 is one of the most promising compound of Panax ginseng Meyer (P. ginseng) with numerous biological activities. Thus, in recent study the inhibitory effect of Rg3 isolated from P. ginseng was investigated

Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
Article|40 citations·2016
Inhibition of IKKβ by celastrol and its analogues – an in silico and in vitro approach
Karpagam Veerappan, Sathishkumar Natarajan, Purushoth Ethiraj, Umashankar Vetrivel, Shila Samuel
SJR Q1Pharmaceutical BiologyOA

CONTEXT: Alzheimer's disease (AD) is the most common form of dementia affecting the aged population and neuroinflammation is one of the most observed AD pathologies. NF-κB is the central regulator of inflammation and inhibitor κB kinase (IKK) is the converging point in NF-κB activation. Celastrol is a natural triterpene used as a treatment for inflammatory conditions. OBJECTIVE: ) induced cytotoxicity and IKKβ activity, respectively. MATERIALS AND METHODS: 10 μM) for 24 h. The cytotoxicity and I

Complementary and alternative medicineMedicine

Research Areas

Plant ScienceMolecular BiologyGeneticsCell BiologyMicrobiologyComputational Theory and Mathematics

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