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Tae-Bo Shim

Yonsei University · 生化学・遺伝学・分子生物学

研究室紹介

Professor Tae-Bo Shim's research lab specializes in the discovery and development of novel small-molecule kinase inhibitors targeting oncogenic kinases involved in cancer progression. The lab focuses on overcoming drug resistance in hematological malignancies and solid tumors by designing inhibitors against clinically relevant kinase mutants, including Bcr-Abl and FGFR2. Key research directions include structure-based drug design, optimization of allosteric and ATP-noncompetitive inhibitors, and the exploration of redox-active natural product derivatives for selective cancer cell cytotoxicity. The lab integrates biochemical, cellular, and in vivo pharmacological studies to advance promising compounds toward preclinical and clinical evaluation.

kinase inhibitorsdrug resistancestructure-based drug designanticancer agentsoncogenic kinases

Research Overview

Papers
203
Total Citations
8,961
Papers (5y)
71
Primary Field
生化学・遺伝学・分子生物学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
71total
2022
2023
2024
2025
2026
Citations per year (5y)
162total
20222023202420252026

Selected Papers

15
1
Article|350 citations·2020
Mapping the Degradable Kinome Provides a Resource for Expedited Degrader Development
Katherine A. Donovan, Fleur M. Ferguson, Jonathan W. Bushman, Nicholas A. Eleuteri, Debabrata Bhunia, SeongShick Ryu, Li Tan, Kun Shi, Hong Yue, Xiaoxi Liu, Dennis Dobrovolsky, Baishan Jiang
SJR Q1CellOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
Article|73 citations·2010
A Type-II Kinase Inhibitor Capable of Inhibiting the T315I “Gatekeeper” Mutant of Bcr-Abl
Hwan Geun Choi, Pingda Ren, Francisco Adrián, Fangxian Sun, Hyun Soo Lee, Xia Wang, Qiang Ding, Guobao Zhang, Yongping Xie, Jianming Zhang, Yi Liu, Tove Tuntland
SJR Q1Journal of Medicinal ChemistryOA

The second generation of Bcr-Abl inhibitors nilotinib, dasatinib, and bosutinib developed to override imatinib resistance are not active against the T315I "gatekeeper" mutation. Here we describe a type-II T315I inhibitor 2 (GNF-7), based upon a 3,4-dihydropyrimido[4,5-d]pyrimidin-2(1H)-one scaffold which is capable of potently inhibiting wild-type and T315I Bcr-Abl as well as other clinically relevant Bcr-Abl mutants such as G250E, Q252H, Y253H, E255K, E255V, F317L, and M351T in biochemical and

HematologyMedicine
3
Article|59 citations·2017
Identification of TG100-115 as a new and potent TRPM7 kinase inhibitor, which suppresses breast cancer cell migration and invasion
Chiman Song, Yeonju Bae, JinJoo Jun, Hyomin Lee, Nam Doo Kim, Kyung‐Bok Lee, Wooyoung Hur, Jae‐Yong Park, Taebo Sim
SJR Q2Biochimica et Biophysica Acta (BBA) - General Subjects
Nutrition and DieteticsNursing
4
Article|58 citations·2010
Expanding the Diversity of Allosteric Bcr-Abl Inhibitors
Xianming Deng, Okram Barun, Qiang Ding, Jianming Zhang, Yongmun Choi, Francisco Adrián, Amy Wojciechowski, Guobao Zhang, Jianwei Che, Badry Bursulaya, Sandra W. Cowan‐Jacob, Gabriele Rummel
SJR Q1Journal of Medicinal ChemistryOA

Inhibition of Bcr-Abl kinase activity by imatinib for the treatment of chronic myeloid leukemia (CML) currently serves as the paradigm for targeting dominant oncogenes with small molecules. We recently reported the discovery of GNF-2 (1) and GNF-5 (2) as selective non-ATP competitive inhibitors of cellular Bcr-Abl kinase activity that target the myristate binding site. Here, we used cell-based structure-activity relationships to guide the optimization and diversification of ligands that are capa

HematologyMedicine
5
Review|38 citations·2021
Natural and Synthetic Lactones Possessing Antitumor Activities
Younghoon Kim, Sandip Sengupta, Taebo Sim
SJR Q1International Journal of Molecular SciencesOA

Cancer is one of the leading causes of death globally, accounting for an estimated 8 million deaths each year. As a result, there have been urgent unmet medical needs to discover novel oncology drugs. Natural and synthetic lactones have a broad spectrum of biological uses including anti-tumor, anti-helminthic, anti-microbial, and anti-inflammatory activities. Particularly, several natural and synthetic lactones have emerged as anti-cancer agents over the past decades. In this review, we address

PharmacologyMedicine
6
Article|36 citations·2015
Antitumor effects and molecular mechanisms of ponatinib on endometrial cancer cells harboring activating FGFR2 mutations
Do-Hee Kim, Yeonui Kwak, Nam Doo Kim, Taebo Sim
SJR Q1Cancer Biology & TherapyOA

Aberrant mutational activation of FGFR2 is associated with endometrial cancers (ECs). AP24534 (ponatinib) currently undergoing clinical trials has been known to be an orally available multi-targeted tyrosine kinase inhibitor. Our biochemical kinase assay showed that AP24534 is potent against wild-type FGFR1-4 and 5 mutant FGFRs (V561M-FGFR1, N549H-FGFR2, K650E-FGFR3, G697C-FGFR3, N535K-FGFR4) and possesses the strongest kinase-inhibitory activity on N549H-FGFR2 (IC50 of 0.5 nM) among all FGFRs t

Molecular BiologyBiochemistry, Genetics and Molecular Biology
7
Article|34 citations·2015
Identification of Novel ROS Inducers: Quinone Derivatives Tethered to Long Hydrocarbon Chains
Yeonsun Hong, Sandip Sengupta, Wooyoung Hur, Taebo Sim
SJR Q1Journal of Medicinal Chemistry

We performed the first synthesis of the 17-carbon chain-tethered quinone moiety 22 (SAN5201) of irisferin A, a natural product exhibiting anticancer activity, and its derivatives. We found that 22 is a potent ROS inducer and cytotoxic agent. Compound 25 (SAN7401), the hydroquinone form of 22, induced a significant release of intracellular ROS and apoptosis (EC50 = 1.3-2.6 μM) in cancer cell lines, including A549 and HCT-116. Compared with the activity of a well-known ROS inducer, piperlongumine,

BiochemistryBiochemistry, Genetics and Molecular Biology
8
Article|33 citations·2021
Identification of Thieno[3,2-d]pyrimidine Derivatives as Dual Inhibitors of Focal Adhesion Kinase and FMS-like Tyrosine Kinase 3
Hanna Cho, Injae Shin, Hojong Yoon, Eunhye Jeon, Jiwon Lee, Younghoon Kim, SeongShick Ryu, Chiman Song, Nam Hoon Kwon, Youngji Moon, Sung‐Hoon Kim, Nam Doo Kim
SJR Q1Journal of Medicinal ChemistryOA

Focal adhesion kinase (FAK) is overexpressed in highly invasive and metastatic cancers. To identify novel FAK inhibitors, we designed and synthesized various thieno[3,2-<i>d</i>]pyrimidine derivatives. An intensive structure-activity relationship (SAR) study led to the identification of <b>26</b> as a lead. Moreover, <b>26</b>, a multitargeted kinase inhibitor, possesses excellent potencies against FLT3 mutants as well as FAK. Gratifyingly, <b>26</b> remarkably inhibits recalcitrant FLT3 mutants

Immunology and AllergyMedicine
9
Article|33 citations·2023
Targeted kinase degradation via the KLHDC2 ubiquitin E3 ligase
Younghoon Kim, Pooreum Seo, Eunhye Jeon, Inchul You, Kyubin Hwang, Namkyoung Kim, Jason Tse, Ju‐Hyeon Bae, Ha‐Soon Choi, Stephen M. Hinshaw, Nathanael S. Gray, Taebo Sim
SJR Q1Cell chemical biologyOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
Article|31 citations·2015
A Pyrazolo[3,4-d]pyrimidin-4-amine Derivative Containing an Isoxazole Moiety Is a Selective and Potent Inhibitor of RET Gatekeeper Mutants
Hojong Yoon, Yeonui Kwak, Seung-Hye Choi, Hanna Cho, Nam Doo Kim, Taebo Sim
SJR Q1Journal of Medicinal ChemistryOA

Aberrant RET kinase signaling plays critical roles in several human cancers such as thyroid carcinoma. The gatekeeper mutants (V804L or V804M) of RET are resistant to currently approved RET inhibitors such as cabozantinib and vandetanib. We, for the first time, report a highly selective and extremely potent RET inhibitor, 6i rationally designed. Compound 6i inhibits strongly RET gatekeeper mutants and other clinically relevant RET mutants as well as wt-RET. This substance also significantly supp

OncologyMedicine
11
Article|23 citations·2020
Suppression of TRPM7 enhances TRAIL‐induced apoptosis in triple‐negative breast cancer cells
Chiman Song, Seung-Hye Choi, Ki‐Bong Oh, Taebo Sim
SJR Q1Journal of Cellular Physiology

Abstract Transient receptor potential cation channel subfamily M member 7 (TRPM7) composed of an ion channel and a kinase domain regulates triple‐negative breast cancer (TNBC) cell migration, invasion, and metastasis, but it does not modulate TNBC proliferation. However, previous studies have shown that the combination treatment of nonselective TRPM7 channel inhibitors (2‐aminoethoxydiphenyl borate and Gd 3+ ) with tumor necrosis factor‐related apoptosis‐inducing ligand (TRAIL) increases antipro

Nutrition and DieteticsNursing
12
Article|22 citations·2020
Anti-glioma effects of 2-aminothiophene-3-carboxamide derivatives, ANO1 channel blockers
Seung-Hye Choi, SeongShick Ryu, Kyoungmi Sim, Chiman Song, Injae Shin, Seongseop Kim, Young‐Sun Lee, Jae‐Yong Park, Taebo Sim
SJR Q1European Journal of Medicinal ChemistryOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
13
Article|22 citations·2018
First SAR Study for Overriding NRAS Mutant Driven Acute Myeloid Leukemia
Hanna Cho, Injae Shin, Eunhye Ju, Seung-Hye Choi, Wooyoung Hur, Haelee Kim, Eunmi Hong, Nam Doo Kim, Hwan Geun Choi, Nathanael S. Gray, Taebo Sim
SJR Q1Journal of Medicinal ChemistryOA

GNF-7, a multitargeted kinase inhibitor, served as a dual kinase inhibitor of ACK1 and GCK, which provided a novel therapeutic strategy for overriding AML expressing NRAS mutation. This SAR study with GNF-7 derivatives, designed to target NRAS mutant-driven AML, led to identification of the extremely potent inhibitors, 10d, 10g, and 11i, which possess single-digit nanomolar inhibitory activity against both ACK1 and GCK. These substances strongly suppress proliferation of mutant NRAS expressing A

Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
Article|22 citations·2019
Identification of 1 H -pyrazolo[3,4-b]pyridine derivatives as potent ALK-L1196M inhibitors
Yunju Nam, Dongkeun Hwang, Namdoo Kim, Hong Seog Seo, Khalid B. Selim, Taebo Sim
SJR Q2Journal of Enzyme Inhibition and Medicinal ChemistryOA

Anaplastic lymphoma kinase (ALK) has been recognised as a promising molecular target of targeted therapy for NSCLC. We performed SAR study of pyrazolo[3,4-b]pyridines to override crizotinib resistance caused by ALK-L1196M mutation and identified a novel and potent L1196M inhibitor, 10g. 10g displayed exceptional enzymatic activities (<0.5 nM of IC50) against ALK-L1196M as well as against ALK-wt. In addition, 10g is an extremely potent inhibitor of ROS1 (<0.5 nM of IC50) and displays excellent se

Pulmonary and Respiratory MedicineMedicine
15
Article|20 citations·2014
Asymmetric synthesis of (+)-lentiginosine using a chiral aziridine based approach
Hojong Yoon, Kyung Seon Cho, Taebo Sim
Tetrahedron Asymmetry
Organic ChemistryChemistry

Research Areas

Molecular BiologyOrganic ChemistryPulmonary and Respiratory MedicineHematologyOncologyPharmacology

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