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Ye Ra Choi

Seoul National University · 医学

研究室紹介

Professor Ye Ra Choi's research lab specializes in medical image analysis and artificial intelligence, focusing on advancing quantitative radiology through deep learning. The lab develops and validates AI algorithms for automated segmentation and detection in medical imaging, particularly in CT and X-ray, with applications in sarcopenia assessment, lung nodule characterization, and liver fibrosis staging. Their work emphasizes clinical translation, improving diagnostic accuracy, and reducing radiologist workload through AI-driven solutions.

medical image analysisdeep learningradiomicssarcopenialung nodule detection

Research Overview

Papers
38
Total Citations
569
Papers (5y)
12
Primary Field
医学

Research Output Trend

Figures are computed from collected data and may differ slightly.

Publications per year (5y)
12total
2022
2023
2024
2025
2026
Citations per year (5y)
128total
20222023202420252026

Selected Papers

15
1
Article|118 citations·2021
Deep neural network for automatic volumetric segmentation of whole-body CT images for body composition assessment
Yoon Seong Lee, Namki Hong, Joseph Nathanael Witanto, Ye Ra Choi, Junghoan Park, Pierre Decazes, Florian Eude, Chang Oh Kim, Hyeon Chang Kim, Jin Mo Goo, Yumie Rhee, Soon Ho Yoon
SJR Q1Clinical NutritionOA

BACKGROUND & AIMS: Body composition analysis on CT images is a valuable tool for sarcopenia assessment. We aimed to develop and validate a deep neural network applicable to whole-body CT images of PET-CT scan for the automatic volumetric segmentation of body composition. METHODS: F-fluorodeoxyglucose PET-CT scans of 100 patients were retrospectively included. Two radiologists semi-automatically labeled the following seven body components in every CT image slice, providing a total of 46,967 image

PhysiologyMedicine
2
Article|64 citations·2013
Differentiation of large (≥5cm) gastrointestinal stromal tumors from benign subepithelial tumors in the stomach: Radiologists’ performance using CT
Ye Ra Choi, Se Hyung Kim, Se Hyung Kim, Sun Ah Kim, Cheong‐Il Shin, Hyung Jin Kim, Hyung Jin Kim, Seong Ho Kim, Joon Koo Han, Byung Ihn Choi
SJR Q1European Journal of RadiologyOA
GastroenterologyMedicine
3
Article|51 citations·2018
Acute invasive fungal rhinosinusitis: MR imaging features and their impact on prognosis
Ye Ra Choi, Ji‐hoon Kim, Hye Sook Min, Jae‐Kyung Won, Hyun Jik Kim, Roh‐Eul Yoo, Koung Mi Kang, Sun‐Won Park, Tae Jin Yun, Seung Hong Choi, Chul‐Ho Sohn, Jung Hyo Rhim
SJR Q1Neuroradiology
OtorhinolaryngologyMedicine
4
Article|48 citations·2013
Comparison of Magnetic Resonance Elastography and Gadoxetate Disodium–Enhanced Magnetic Resonance Imaging for the Evaluation of Hepatic Fibrosis
Ye Ra Choi, Jeong Min Lee, Jeong Hee Yoon, Joon Koo Han, Byung Ihn Choi
SJR Q1Investigative Radiology

Magnetic resonance elastography was superior to the gadoxetate disodium-enhancement MRI for HF staging.

EpidemiologyMedicine
5
Article|33 citations·2023
CT analysis of thoracolumbar body composition for estimating whole-body composition
Jung Hee Hong, Hyunsook Hong, Ye Ra Choi, Dong Hyun Kim, Jin Young Kim, Jeong‐Hwa Yoon, Soon Ho Yoon
SJR Q1Insights into ImagingOA

BACKGROUND: To evaluate the correlation between single- and multi-slice cross-sectional thoracolumbar and whole-body compositions. METHODS: We retrospectively included patients who underwent whole-body PET-CT scans from January 2016 to December 2019 at multiple institutions. A priori-developed, deep learning-based commercially available 3D U-Net segmentation provided whole-body 3D reference volumes and 2D areas of muscle, visceral fat, and subcutaneous fat at the upper, middle, and lower endplat

PhysiologyMedicine
6
Article|27 citations·2016
Measurement Variability of Persistent Pulmonary Subsolid Nodules on Same-Day Repeat CT: What Is the Threshold to Determine True Nodule Growth during Follow-Up?
Hyungjin Kim, Chang Min Park, Yong Sub Song, Leonard Sunwoo, Ye Ra Choi, Jung Im Kim, Jae Hyun Kim, Jae Seok Bae, Jong Hyuk Lee, Jin Mo Goo
SJR Q1PLoS ONEOA

PURPOSE: To assess the measurement variability of subsolid nodules (SSNs) in follow-up situations and to compare the degree of variability between measurement metrics. METHODS: Two same-day repeat-CT scans of 69 patients (24 men and 45 women) with 69 SSNs were randomly assigned as initial or follow-up scans and were read by the same (situation 1) or different readers (situation 2). SSN size and solid portion size were measured in both situations. Measurement variability was calculated and coeffi

Pulmonary and Respiratory MedicineMedicine
7
Article|22 citations·2021
Performance of a deep-learning algorithm for referable thoracic abnormalities on chest radiographs: A multicenter study of a health screening cohort
Eun Young Kim, Young Jae Kim, Won-Jun Choi, Gi Pyo Lee, Ye Ra Choi, Kwang Nam Jin, Young Jun Cho
SJR Q1PLoS ONEOA

PURPOSE: This study evaluated the performance of a commercially available deep-learning algorithm (DLA) (Insight CXR, Lunit, Seoul, South Korea) for referable thoracic abnormalities on chest X-ray (CXR) using a consecutively collected multicenter health screening cohort. METHODS AND MATERIALS: A consecutive health screening cohort of participants who underwent both CXR and chest computed tomography (CT) within 1 month was retrospectively collected from three institutions' health care clinics (n

Pulmonary and Respiratory MedicineMedicine
8
Article|22 citations·2022
Artificial Intelligence-Based Identification of Normal Chest Radiographs: A Simulation Study in a Multicenter Health Screening Cohort
Hyunsuk Yoo, Eun Young Kim, Hyungjin Kim, Ye Ra Choi, Moon Young Kim, Sung Ho Hwang, Young Joong Kim, Young Jun Cho, Kwang Nam Jin
SJR Q1Korean Journal of RadiologyOA

This study suggests the feasibility of sorting and removing normal CXRs using AI with a tailored cut-off to increase efficiency and reduce the workload of radiologists.

Pulmonary and Respiratory MedicineMedicine
9
Article|20 citations·2016
Association between Image Characteristics on Chest CT and Severe Pleural Adhesion during Lung Cancer Surgery
Kwang Nam Jin, Yong Won Sung, Se Jin Oh, Ye Ra Choi, Hyoun Cho, Jae Sung Choi, Hyeon Jong Moon
SJR Q1PLoS ONEOA

The aim of this study was to investigate the association between image characteristics on preoperative chest CT and severe pleural adhesion during surgery in lung cancer patients. We included consecutive 124 patients who underwent lung cancer surgeries. Preoperative chest CT was retrospectively reviewed to assess pleural thickening or calcification, pulmonary calcified nodules, active pulmonary inflammation, extent of emphysema, interstitial pneumonitis, and bronchiectasis in the operated thorax

Pulmonary and Respiratory MedicineMedicine
10
Article|20 citations·2021
Evaluation of a deep learning-based computer-aided detection algorithm on chest radiographs
Soo Yun Choi, Sunggyun Park, Minchul Kim, Jongchan Park, Ye Ra Choi, Kwang Nam Jin
SJR Q3MedicineOA

ABSTRACT: Along with recent developments in deep learning techniques, computer-aided diagnosis (CAD) has been growing rapidly in the medical imaging field. In this work, we evaluate the deep learning-based CAD algorithm (DCAD) for detecting and localizing 3 major thoracic abnormalities visible on chest radiographs (CR) and to compare the performance of physicians with and without the assistance of the algorithm. A subset of 244 subjects (60% abnormal CRs) was evaluated. Abnormal findings include

Radiology, Nuclear Medicine and ImagingMedicine
11
Article|17 citations·2017
Therapeutic response assessment using 3D ultrasound for hepatic metastasis from colorectal cancer: Application of a personalized, 3D-printed tumor model using CT images
Ye Ra Choi, Jung Hoon Kim, Sang Joon Park, Bo Yun Hur, Joon Koo Han
SJR Q1PLoS ONEOA

3D US tumor volume using a personalized 3D-printed model is an accurate and reliable method for the response evaluation in comparison with CT tumor volume.

RadiationPhysics and Astronomy
12
Article|16 citations·2022
Treatment Response and Clinical Outcomes of Well-Differentiated High-Grade Neuroendocrine Tumors to Lutetium-177-DOTATATE
Nitya Raj, Kelley Coffman, Tiffany Le, Richard Kinh Gian, Johnathan Rafailov, Ye Ra Choi, Joanne F. Chou, Marinela Capanu, Mark Dunphy, Josef J. Fox, Ravinder K. Grewal, Ryan Reddy
SJR Q2NeuroendocrinologyOA

INTRODUCTION: Lutetium-177 (177Lu)-DOTATATE received FDA approval in 2018 to treat somatostatin receptor-positive gastroenteropancreatic neuroendocrine tumors (NETs). Little data are available on response and outcomes for well-differentiated (WD) high-grade (HG) NETs treated with 177Lu-DOTATATE. MATERIALS AND METHODS: Patients with WD HG NETs treated with 177Lu-DOTATATE at MSK from 2018 to 2020 were identified. Demographics, response (RECIST 1.1), and progression-free survival (PFS) were determi

EpidemiologyMedicine
13
Article|14 citations·2018
Diagnostic accuracy of contrast-enhanced dynamic CT for small hypervascular hepatocellular carcinoma and assessment of dynamic enhancement patterns: Results of two-year follow-up using cone-beam CT hepatic arteriography
Ye Ra Choi, Jin Wook Chung, Mi Hye Yu, Myungsu Lee, Jung Hoon Kim
SJR Q1PLoS ONEOA

Many subcentimeter sized hypervascular HCCs were frequently missed or not evident on CT at the initial diagnostic workup. CT has limitations for diagnosing HCCs that are <1 cm in size or have atypical enhancement patterns.

HepatologyMedicine
14
Article|13 citations·2022
Localization-adjusted diagnostic performance and assistance effect of a computer-aided detection system for pneumothorax and consolidation
Sun Yeop Lee, Sangwoo Ha, Min Gyeong Jeon, Hao Li, Hyunju Choi, Hwa Pyung Kim, Ye Ra Choi, I Hoseok, Yeon Joo Jeong, Yoon Ha Park, Hyemin Ahn, Sang Hyup Hong
SJR Q1npj Digital MedicineOA

While many deep-learning-based computer-aided detection systems (CAD) have been developed and commercialized for abnormality detection in chest radiographs (CXR), their ability to localize a target abnormality is rarely reported. Localization accuracy is important in terms of model interpretability, which is crucial in clinical settings. Moreover, diagnostic performances are likely to vary depending on thresholds which define an accurate localization. In a multi-center, stand-alone clinical tria

Pulmonary and Respiratory MedicineMedicine
15
Article|12 citations·2023
Chest Radiography of Tuberculosis: Determination of Activity Using Deep Learning Algorithm
Ye Ra Choi, Soon Ho Yoon, Jihang Kim, Jin Young Yoo, Hwiyoung Kim, Kwang Nam Jin
SJR Q2Tuberculosis & respiratory diseasesOA

BACKGROUND: Inactive or old, healed tuberculosis (TB) on chest radiograph (CR) is often found in high TB incidence countries, and to avoid unnecessary evaluation and medication, differentiation from active TB is important. This study develops a deep learning (DL) model to estimate activity in a single chest radiographic analysis. METHODS: A total of 3,824 active TB CRs from 511 individuals and 2,277 inactive TB CRs from 558 individuals were retrospectively collected. A pretrained convolutional n

Infectious DiseasesMedicine

Research Areas

Pulmonary and Respiratory MedicineEpidemiologyRadiology, Nuclear Medicine and ImagingPhysiologyHepatologyInfectious Diseases

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