Skip to main content

김두리 교수

Doory Kim

한양대학교 화학과 · 생화학·유전·분자생물학

연구실 소개

김두리 교수의 연구실은 초해상도 광학 현미경 기술을 기반으로 세포 내 분자 구조와 기능을 나노미터 해상도에서 규명하는 데 주력하고 있습니다. 특히, 전자현미경과의 연계 초해상도 현미경 기법을 개발하여 생체 분자의 정밀한 위치와 상호작용을 해부하고 있으며, 단일 분자 수준에서의 반응 메커니즘과 세포 구조의 동적 변화를 실시간으로 분석하는 데에 초점을 맞추고 있습니다. 또한 딥러닝 기반 이미지 분석 알고리즘을 활용해 초해상도 이미지의 정밀도와 분석 효율성을 극대화하고 있습니다.

초해상도 현미경단일 분자 분석세포 내 구조 분석딥러닝 이미지 분석생체 분자 동역학

연구 현황

논문 수
59
총 인용 수
1,615
최근 5년 논문
31
주요 분야
생화학·유전·분자생물학

연구 성과 추이

표시된 성과는 수집된 데이터 기준으로 산출되며, 일부 차이가 있을 수 있습니다.

5개년 연도별 논문 게재 수
31총합
2022
2023
2024
2025
2026
5개년 연도별 피인용 수
345총합
20222023202420252026

주요 논문

15
1
논문|인용수 98·2015
Correlative Stochastic Optical Reconstruction Microscopy and Electron Microscopy
Doory Kim, Thomas J. Deerinck, Yaron M. Sigal, Hazen P. Babcock, Mark H. Ellisman, Xiaowei Zhuang
SJR Q1PLoS ONEOA

Correlative fluorescence light microscopy and electron microscopy allows the imaging of spatial distributions of specific biomolecules in the context of cellular ultrastructure. Recent development of super-resolution fluorescence microscopy allows the location of molecules to be determined with nanometer-scale spatial resolution. However, correlative super-resolution fluorescence microscopy and electron microscopy (EM) still remains challenging because the optimal specimen preparation and imagin

BiophysicsBiochemistry, Genetics and Molecular Biology
2
논문|인용수 67·2017
Spectrally Resolved Super-Resolution Microscopy Unveils Multipath Reaction Pathways of Single Spiropyran Molecules
Doory Kim, Zhengyang Zhang, Ke Xu
SJR Q1Journal of the American Chemical Society

By recording both the images and emission spectra of thousands of single fluorescent molecules stochastically generated from the ring-opening reaction of a spiropyran, we provide mechanistic insights into its multipath reaction pathways. Through statistics of the measured single-molecule spectra, we identify two spectrally distinct isomers, presumably TTC and TTT cis-trans isomers, for the open-ring merocyanine product, and discover a strong solvent polarity-dependence for the relative populatio

Materials ChemistryMaterials Science
3
리뷰|인용수 65·2021
Recent Developments in Lanthanide-Doped Alkaline Earth Aluminate Phosphors with Enhanced and Long-Persistent Luminescence
Doory Kim
SJR Q1NanomaterialsOA

Lanthanide-activated alkaline earth aluminate phosphors are excellent luminescent materials that are designed to overcome the limitations of conventional sulfide-based phosphors. The increasing research attention on these phosphors over the past decade has led to a drastic improvement in their phosphorescence efficiencies and resulted in a wide variety of phosphorescence colors, which can facilitate applications in various areas. This review article discusses the development of lanthanide-activa

Materials ChemistryMaterials Science
4
논문|인용수 59·2022
Visualizing extracellular vesicle biogenesis in gram-positive bacteria using super-resolution microscopy
Dokyung Jeong, Minjeong Kim, Yejin Park, Jinkyoung Chung, Hee‐Seok Kweon, Nae‐Gyu Kang, Seung Jin Hwang, Sung Hun Youn, Bo Kyoung Hwang, Doory Kim
SJR Q1BMC BiologyOA

BACKGROUND: Recently, bacterial extracellular vesicles (EVs) have been considered to play crucial roles in various biological processes and have great potential for developing cancer therapeutics and biomedicine. However, studies on bacterial EVs have mainly focused on outer membrane vesicles released from gram-negative bacteria since the outermost peptidoglycan layer in gram-positive bacteria is thought to preclude the release of EVs as a physical barrier. RESULTS: Here, we examined the ultrast

MicrobiologyImmunology and Microbiology
5
논문|인용수 49·2021
Super-resolution imaging of platelet-activation process and its quantitative analysis
Jinkyoung Chung, Dokyung Jeong, Geun-ho Kim, Seokran Go, Jaewoo Song, Eunyoung Moon, Yang Hoon Huh, Doory Kim
SJR Q1Scientific ReportsOA

Understanding the platelet activation molecular pathways by characterizing specific protein clusters within platelets is essential to identify the platelet activation state and improve the existing therapies for hemostatic disorders. Here, we employed various state-of-the-art super-resolution imaging and quantification methods to characterize the platelet spatiotemporal ultrastructural change during the activation process due to phorbol 12-myristate 13-acetate (PMA) stimuli by observing the cyto

BiophysicsBiochemistry, Genetics and Molecular Biology
6
리뷰|인용수 34·2022
Development of Deep-Learning-Based Single-Molecule Localization Image Analysis
Yoonsuk Hyun, Doory Kim
SJR Q1International Journal of Molecular SciencesOA

Recent developments in super-resolution fluorescence microscopic techniques (SRM) have allowed for nanoscale imaging that greatly facilitates our understanding of nanostructures. However, the performance of single-molecule localization microscopy (SMLM) is significantly restricted by the image analysis method, as the final super-resolution image is reconstructed from identified localizations through computational analysis. With recent advancements in deep learning, many researchers have employed

BiophysicsBiochemistry, Genetics and Molecular Biology
7
리뷰|인용수 31·2020
Direct Visualization of Actin Filaments and Actin-Binding Proteins in Neuronal Cells
Minkyo Jung, Doory Kim, Ji Young Mun
SJR Q1Frontiers in Cell and Developmental BiologyOA

Actin networks and actin-binding proteins (ABPs) are most abundant in the cytoskeleton of neurons. The function of ABPs in neurons is nucleation of actin polymerization, polymerization or depolymerization regulation, bundling of actin through crosslinking or stabilization, cargo movement along actin filaments, and anchoring of actin to other cellular components. In axons, ABP-actin interaction forms a dynamic, deep actin network, which regulates axon extension, guidance, axon branches, and synap

BiophysicsBiochemistry, Genetics and Molecular Biology
8
리뷰|인용수 31·2022
Recent Developments in Correlative Super-Resolution Fluorescence Microscopy and Electron Microscopy
Dokyung Jeong, Doory Kim
SJR Q1Molecules and CellsOA

The recently developed correlative super-resolution fluorescence microscopy (SRM) and electron microscopy (EM) is a hybrid technique that simultaneously obtains the spatial locations of specific molecules with SRM and the context of the cellular ultrastructure by EM. Although the combination of SRM and EM remains challenging owing to the incompatibility of samples prepared for these techniques, the increasing research attention on these methods has led to drastic improvements in their performanc

BiophysicsBiochemistry, Genetics and Molecular Biology
9
리뷰|인용수 27·2023
Recent development of computational cluster analysis methods for single-molecule localization microscopy images
Yoonsuk Hyun, Doory Kim
SJR Q1Computational and Structural Biotechnology JournalOA

With the development of super-resolution imaging techniques, it is crucial to understand protein structure at the nanoscale in terms of clustering and organization in a cell. However, cluster analysis from single-molecule localization microscopy (SMLM) images remains challenging because the classical computational cluster analysis methods developed for conventional microscopy images do not apply to pointillism SMLM data, necessitating the development of distinct methods for cluster analysis from

BiophysicsBiochemistry, Genetics and Molecular Biology
10
논문|인용수 26·2021
Super-resolution imaging reveals cytoskeleton-dependent organelle rearrangement within platelets at intermediate stages of maturation
Seokran Go, Dokyung Jeong, Jinkyoung Chung, Geun-ho Kim, Jaewoo Song, Eunyoung Moon, Yang Hoon Huh, Doory Kim
SJR Q1StructureOA
HematologyMedicine
11
논문|인용수 24·2021
Development of a New Approach for Low-Laser-Power Super-Resolution Fluorescence Imaging
Jinkyoung Chung, Uidon Jeong, Dokyung Jeong, Seokran Go, Doory Kim
SJR Q1Analytical Chemistry

The development of super-resolution fluorescence microscopy over the past decade has drastically improved the resolution of light microscopy to ∼10 nm. Stochastic optical reconstruction microscopy (STORM) can be used to achieve subdiffraction-limit resolution by sequentially imaging and localizing individual fluorophores. In principle, the super-resolution of STORM can be obtained by high-accuracy localization of photoswitchable fluorophores, which require fast photoswitching and bright fluoresc

BiophysicsBiochemistry, Genetics and Molecular Biology
12
논문|인용수 21·2022
Super‐resolution fluorescence microscopy‐based single‐molecule spectroscopy
Dokyung Jeong, Doory Kim
SJR Q2Bulletin of the Korean Chemical Society

Abstract The rise of super‐resolution fluorescence microscopy (SRM) has revolutionized our understanding of the nanoscale world. SRM has recently been correlated with spectroscopy techniques to obtain rich spectral information of individual molecules in addition to localization information. This technique ultimately provides multidimensional and functional information of single molecules, which is generally masked in the ensemble averages of previous bulk measurements and creates exciting new op

BiophysicsBiochemistry, Genetics and Molecular Biology
13
논문|인용수 21·2022
Super-Resolution Fluorescence Imaging for Semiconductor Nanoscale Metrology and Inspection
Duyen Thi Nguyen, Seohyun Mun, Hyunbum Park, Uidon Jeong, Geun‐ho Kim, Seongsil Lee, Chung-Sam Jun, Myung Mo Sung, Doory Kim
SJR Q1Nano Letters

The increase in the number and complexity of process levels in semiconductor production has driven the need for the development of new measurement methods that can evaluate semiconductor devices at the critical dimensions of fine patterns and simultaneously inspect nanoscale contaminants or defects. However, conventional optical inspection methods often fail to resolve device patterns or defects at the level of tens of nanometers required for device development owing to their diffraction-limited

Biomedical EngineeringEngineering
14
논문|인용수 20·2022
Polarity Nano-Mapping of Polymer Film Using Spectrally Resolved Super-Resolution Imaging
Yejin Park, Dokyung Jeong, Uidon Jeong, Hyunbum Park, Sung‐Min Yoon, Minjae Kang, Doory Kim
SJR Q1ACS Applied Materials & Interfaces

With the rapid development of the nanofabrication of polymer materials, the local measurement of the chemical properties of polymer nanostructures has become crucial because they can be highly heterogeneous at the nanoscale. We developed a spectroscopic imaging approach to characterize the nanoscale local polarity of polymer films via spectrally resolved super-resolution microscopy. We demonstrate the capability of the recently developed single-molecule sensing and imaging method to probe the po

BiophysicsBiochemistry, Genetics and Molecular Biology
15
논문|인용수 18·2016
Effect of Composition and Impurities on the Phosphorescence of Green-Emitting Alkaline Earth Aluminate Phosphor
Doory Kim, Han-Eol Kim, Chang‐Hong Kim
SJR Q1PLoS ONEOA

Recent improvements to SrAl2O4:Eu2+, Dy3+ phosphors have enabled the use of luminescent hosts with a stable crystal structure and high physical and chemical stability, thus overcoming the bottleneck in the applicability of ZnS:Cu phosphors. However, enhancement of afterglow lifetime and brightness in SrAl2O4:Eu2+, Dy3+ phosphors remains a challenging task. Here, we have improved the afterglow characteristics in terms of persistence time and brightness by a systematic investigation of the composi

Materials ChemistryMaterials Science

대표 연구 분야

BiophysicsMolecular BiologyMaterials ChemistryMicrobiologyPublic Health, Environmental and Occupational HealthComputational Theory and Mathematics

김두리 교수의 연구를 Nubint에서 더 깊이 살펴보세요

이 연구실의 논문을 앱에서 열어 AI와 함께 읽고, 핵심을 요약하고, 내 글에 인용하세요.