김재경 교수
Jae Kyoung Kim
KAIST 수리과학과 · 물리·천문학
연구실 소개
김재경 교수의 연구실은 약물 동역학과 단일세포 유전자 발현 분석을 중심으로, 복잡계의 다스름한 상호작용을 수학적 모델링과 데이터 기반 분석으로 해석하는 데 전문성을 기르고 있습니다. 특히 타겟 매개 약물 분포 모델링과 단일세포 RNA 시퀀싱 데이터의 자동화된 분석 파이프라인 개발을 통해 약물 개발 및 생물학적 이질성 이해에 기여하고 있습니다. 연구는 고도로 비선형적인 생물학적 시스템에서의 인과적 메커니즘을 규명하는 데 초점을 맞추고 있습니다.
연구 현황
연구 성과 추이
표시된 성과는 수집된 데이터 기준으로 산출되며, 일부 차이가 있을 수 있습니다.
주요 논문
5Abstract Competitive target-mediated drug disposition (competitive TMDD) arises when two drugs compete for the same target receptor. These dynamics can be characterized by the full competitive TMDD model; yet, its complexity motivated the use of a reduced model, which is invalid under high receptor concentrations. While this problem can be resolved by using the total quasi-steady state approximation (tQSSA), which remains valid for all receptor conditions, the exact formula of the tQSSA-based re
• Fully automated, data-driven clustering pipeline for scRNA-seq analysis. • Addresses the limitation of fixed principal component defaults in DR. • Data-driven pipeline improves clustering performance by 10-14%. • Performance gains are most pronounced on high-sparsity, high-skewness data. Single-cell RNA sequencing (scRNA-seq) provides deep insights into cellular heterogeneity but demands robust dimensionality reduction (DR) and clustering to handle high-dimensional, noisy data. Many DR and clu
Complex systems can often be analyzed at either the microscale of their individual components or the macroscale of their collective organization, yet it remains debated which level of description offers the most meaningful causal understanding. Hoel's recent study in Patterns addresses this challenge by introducing Causal Emergence 2.0, a novel formalization showing that a system's causal workings are best described by how causal influence is distributed across its hierarchy of scales.
Abstract Target-mediated drug disposition (TMDD) models have been widely used to describe nonlinear pharmacokinetic profiles driven by high-affinity, low-capacity drug–target binding. A pTMDD model, derived by applying the Padé approximation of the quasi-steady-state (QSS) model (qTMDD) was previously proposed. Although pTMDD model showed a comparable estimation accuracy while maintaining computational efficiency, further validation in realistic clinical scenarios and comprehensive performance e
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