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김문기 교수

Moon Ki Kim

성균관대학교 기계공학부 · 공학

연구실 소개

김문기 교수의 연구실은 나노소재 및 생체분자 시스템의 구조-기능 관계를 해석하고자, 고해상도 분석 기법과 분자 동역학 시뮬레이션을 융합한 연구를 수행하고 있습니다. 특히 그래핀의 손상 최소화 전이 기술, 수분 여과에 응용 가능한 아쿠아포린 모방형 그래핀 옥사이드 막, DNA 나노구조물의 다차원 정보 저장 메커니즘 등에서 기초적 원리를 규명하고 있습니다. 또한 단백질의 기계적 동역학과 기능적 변형 경로 예측을 위한 고도화된 에너지 네트워크 모델링 기법 개발을 통해 생체 분자의 기계적 특성과 기능적 운동을 정량적으로 분석하고 있습니다.

그래핀 전이DNA 나노구조수분 여과 막단백질 동역학분자 시뮬레이션

연구 현황

논문 수
134
총 인용 수
1,161
최근 5년 논문
28
주요 분야
공학

연구 성과 추이

표시된 성과는 수집된 데이터 기준으로 산출되며, 일부 차이가 있을 수 있습니다.

5개년 연도별 논문 게재 수
28총합
2021
2022
2023
2024
2025
5개년 연도별 피인용 수
174총합
20212022202320242025

주요 논문

15
1
논문|인용수 166·2012
Efficient Transfer of Large-Area Graphene Films onto Rigid Substrates by Hot Pressing
Junmo Kang, Soonhwi Hwang, Jae Hwan Kim, Min Hyeok Kim, Jaechul Ryu, Sangjae Seo, Byung Hee Hong, Moon Ki Kim, Jae‐Boong Choi, Moon Ki Kim, Jae‐Boong Choi
SJR Q1ACS Nano

Graphene films grown on metal substrates by chemical vapor deposition (CVD) method have to be safely transferred onto desired substrates for further applications. Recently, a roll-to-roll (R2R) method has been developed for large-area transfer, which is particularly efficient for flexible target substrates. However, in the case of rigid substrates such as glass or wafers, the roll-based method is found to induce considerable mechanical damages on graphene films during the transfer process, resul

Materials ChemistryMaterials Science
2
논문|인용수 66·2023
Revisiting the Ramachandran plot based on statistical analysis of static and dynamic characteristics of protein structures
Soon Woo Park, Byung Ho Lee, Seung‐Hun Song, Moon Ki Kim
SJR Q1Journal of Structural Biology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
논문|인용수 61·2018
Facilitated Water Transport through Graphene Oxide Membranes Functionalized with Aquaporin‐Mimicking Peptides
Chang Seon Lee, Moon‐ki Choi, Ye Yeong Hwang, Hyunki Kim, Moon Ki Kim, Yun Jung Lee
SJR Q1Advanced Materials

Water purification by membranes is widely investigated to address concerns related to the scarcity of clean water. Achieving high flux and rejection simultaneously is a difficult challenge using such membranes because these properties are mutually exclusive in common artificial membranes. Nature has developed a method for this task involving water-channel membrane proteins known as aquaporins. Here, the design and fabrication of graphene oxide (GO)-based membranes with a surface-tethered peptide

Biomedical EngineeringEngineering
4
preprint|인용수 34·2014
Ternary and senary representations using DNA double-crossover tiles
Byeong‐Hoon Kim, Soojin Jo, Junyoung Son, Jung‐Hoon Kim, Min Hyeok Kim, Si Un Hwang, Sreekantha Reddy Dugasani, Byung-Dong Kim, Wing Kam Liu, Moon Ki Kim, Sung Ha Park
SJR Q2NanotechnologyOA

The information capacity of DNA double-crossover (DX) tiles was successfully increased beyond a binary representation to higher base representations. By controlling the length and the position of DNA hairpins on the DX tile, ternary and senary (base-3 and base-6) digit representations were realized and verified by atomic force microscopy. Also, normal mode analysis was carried out to study the mechanical characteristics of each structure.

Molecular BiologyBiochemistry, Genetics and Molecular Biology
5
논문|인용수 25·2019
A direct assessment of creep life based on small punch creep test
Jeong Hwan Kim, Uijeong Ro, Hoomin Lee, Seok Jun Kang, Byung Ho Lee, Moon Ki Kim
SJR Q1Theoretical and Applied Fracture Mechanics
Mechanical EngineeringEngineering
6
논문|인용수 25·2013
A mass weighted chemical elastic network model elucidates closed form domain motions in proteins
Min Hyeok Kim, Min Hyeok Kim, Sangjae Seo, Jay I. Jeong, Bum‐Joon Kim, Wing Kam Liu, Byeong Soo Lim, Jae Boong Choi, Moon Ki Kim, Moon Ki Kim
SJR Q1Protein ScienceOA

An elastic network model (ENM), usually Cα coarse-grained one, has been widely used to study protein dynamics as an alternative to classical molecular dynamics simulation. This simple approach dramatically saves the computational cost, but sometimes fails to describe a feasible conformational change due to unrealistically excessive spring connections. To overcome this limitation, we propose a mass-weighted chemical elastic network model (MWCENM) in which the total mass of each residue is assumed

Molecular BiologyBiochemistry, Genetics and Molecular Biology
7
논문|인용수 24·2015
Robust elastic network model: A general modeling for precise understanding of protein dynamics
Min Hyeok Kim, Byung Ho Lee, Moon Ki Kim
SJR Q1Journal of Structural Biology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
8
논문|인용수 17·2015
Seismic response analysis of a piping system subjected to multiple support excitations in a base isolated NPP building
Han-Bum Surh, Tae-Young Ryu, Jin-Sung Park, Eun-Woo Ahn, Chul-Sun Choi, Ja Choon Koo, Jae‐Boong Choi, Moon Ki Kim
SJR Q1Nuclear Engineering and Design
Civil and Structural EngineeringEngineering
9
논문|인용수 16·2017
Vibrational characteristics of DNA nanostructures obtained through a mass-weighted chemical elastic network model
Soojin Jo, Junyoung Son, Byung Ho Lee, Sreekantha Reddy Dugasani, Sung Ha Park, Moon Ki Kim
SJR Q1RSC AdvancesOA

The proposed frequency analysis method is a feasible method for understanding DNA nanostructure's vibration characteristics, including both frequencies and mode shapes in atomic detail, adding to the molecular fingerprint provided by the conventional Raman spectrum.

Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
논문|인용수 15·2017
Parametric study for optimal design of an air plasma sprayed thermal barrier coating system with respect to thermal stress
Jang Gyun Lim, Sangjae Seo, Jae Mean Koo, Chang-Sung Seok, Jae Boong Choi, Moon Ki Kim
SJR Q1Surface and Coatings Technology
Aerospace EngineeringEngineering
11
논문|인용수 15·2018
The canonical stewart platform as a six DOF pose sensor for automotive applications
Tae Kyung Jang, Byeong Soo Lim, Moon Ki Kim
SJR Q2Journal of Mechanical Science and Technology
Control and Systems EngineeringEngineering
12
논문|인용수 15·2017
Normal mode-guided transition pathway generation in proteins
Byung Ho Lee, Sangjae Seo, Min Hyeok Kim, Min Hyeok Kim, Young‐Jin Kim, Soojin Jo, Moon‐ki Choi, Hoomin Lee, Jae Boong Choi, Moon Ki Kim, Moon Ki Kim
SJR Q1PLoS ONEOA

The biological function of proteins is closely related to its structural motion. For instance, structurally misfolded proteins do not function properly. Although we are able to experimentally obtain structural information on proteins, it is still challenging to capture their dynamics, such as transition processes. Therefore, we need a simulation method to predict the transition pathways of a protein in order to understand and study large functional deformations. Here, we present a new simulation

Atomic and Molecular Physics, and OpticsPhysics and Astronomy
13
논문|인용수 13·2024
Evaluation of creep properties considering the friction effect of the small punch test
Sangyeop Kim, Uijeong Ro, Taeksang Lee, Moon Ki Kim, Moon Ki Kim
SJR Q1Engineering Fracture Mechanics
Mechanical EngineeringEngineering
14
논문|인용수 11·2013
Efficient prediction of protein conformational pathways based on the hybrid elastic network model
Sangjae Seo, Yunho Jang, Pengfei Qian, Wing Kam Liu, Jae-Boong Choi, Byeong Soo Lim, Moon Ki Kim
SJR Q2Journal of Molecular Graphics and Modelling
Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
논문|인용수 10·2023
Elastic Network Model: A Coarse-Grained Approach to the Study of Biomolecular Dynamics
Soon Woo Park, Byung Ho Lee, Moon Ki Kim
Multiscale Science and Engineering
Molecular BiologyBiochemistry, Genetics and Molecular Biology

대표 연구 분야

Molecular BiologyMechanical EngineeringMechanics of MaterialsMaterials ChemistryBiomedical EngineeringCivil and Structural Engineering

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