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유웅재 교수

Woo-Jae Yoo

포항공과대학교 생명과학과 · 생화학·유전·분자생물학

연구실 소개

유웅재 교수의 연구실은 장내 미생물과 숙주의 대사 및 면역 반응 간의 상호작용을 중심으로, 특히 고지방 식이가 장내 미생물군에 미치는 영향과 그가 유도하는 대사 변화가 심혈관 질환, 비만, 장내 병원성 세균의 침입에 어떻게 기여하는지 규명하고자 합니다. 주로 마우스 모델을 활용해 미생물 대사산물(예: TMAO, 페닐라티크산, 프로피온산)이 숙주의 대사 및 염증 반응에 미치는 영향을 분자생물학적·유전체학적 접근으로 연구하고 있습니다. 특히 장내 미생물이 숙주 대사에 미치는 영향을 이해함으로써, 질병 예방 및 치료 전략 개발에 기여하고자 합니다.

장내 미생물대사 변화병원성 세균염증 반응대사산물

연구 현황

논문 수
15
총 인용 수
783
최근 5년 논문
11
주요 분야
생화학·유전·분자생물학

연구 성과 추이

표시된 성과는 수집된 데이터 기준으로 산출되며, 일부 차이가 있을 수 있습니다.

5개년 연도별 논문 게재 수
11총합
2019
2021
2022
2023
2024
5개년 연도별 피인용 수
644총합
20192021202220232024

주요 논문

15
1
논문|인용수 316·2021
High-fat diet–induced colonocyte dysfunction escalates microbiota-derived trimethylamine N -oxide
Woongjae Yoo, Jacob K. Zieba, Nora J. Foegeding, Teresa P. Torres, Catherine Shelton, Nicolas G. Shealy, Austin J. Byndloss, Stephanie A. Cevallos, Erik Gertz, Connor R. Tiffany, Julia Thomas, Yael Litvak
SJR Q1ScienceOA

Gut bugs and systemic disease risk What people eat has an immediate selective effect on the microbial populations resident in the gut. A high-fat diet is associated with the occurrence of microbes that catabolize choline and the accumulation of trimethylamine N -oxide (TMAO) in the bloodstream, a contributing factor for heart disease. Yoo et al . explored the microbial organisms and pathways that convert choline into TMAO in mice. Although gene clusters for choline metabolism are found widely am

Molecular BiologyBiochemistry, Genetics and Molecular Biology
2
논문|인용수 106·2023
An early-life microbiota metabolite protects against obesity by regulating intestinal lipid metabolism
Catherine Shelton, E. L. Sing, Jessica Mo, Nicolas G. Shealy, Woongjae Yoo, Julia Thomas, Gillian N. Fitz, Pollyana Ribeiro Castro, Tara T. Hickman, Teresa P. Torres, Nora J. Foegeding, Jacob K. Zieba
SJR Q1Cell Host & MicrobeOA

The mechanisms by which the early-life microbiota protects against environmental factors that promote childhood obesity remain largely unknown. Using a mouse model in which young mice are simultaneously exposed to antibiotics and a high-fat (HF) diet, we show that Lactobacillus species, predominant members of the small intestine (SI) microbiota, regulate intestinal epithelial cells (IECs) to limit diet-induced obesity during early life. A Lactobacillus-derived metabolite, phenyllactic acid (PLA)

Molecular BiologyBiochemistry, Genetics and Molecular Biology
3
논문|인용수 75·2018
Genetic Ablation of Butyrate Utilization Attenuates Gastrointestinal Salmonella Disease
Denise N. Bronner, Franziska Faber, Erin E. Olsan, Mariana X. Byndloss, Nada Sayed, Gege Xu, Woongjae Yoo, Dajeong Kim, Sangryeol Ryu, Carlito B. Lebrilla, Andreas J. Bäumler
SJR Q1Cell Host & MicrobeOA
Food ScienceAgricultural and Biological Sciences
4
논문|인용수 71·2022
Salmonella enterica serovar Typhimurium uses anaerobic respiration to overcome propionate-mediated colonization resistance
Catherine Shelton, Woongjae Yoo, Nicolas G. Shealy, Teresa P. Torres, Jacob K. Zieba, M. Wade Calcutt, Nora J. Foegeding, Dajeong Kim, Jinshil Kim, Sangryeol Ryu, Mariana X. Byndloss
SJR Q1Cell ReportsOA

The gut microbiota benefits the host by limiting enteric pathogen expansion (colonization resistance), partially via the production of inhibitory metabolites. Propionate, a short-chain fatty acid produced by microbiota members, is proposed to mediate colonization resistance against Salmonella enterica serovar Typhimurium (S. Tm). Here, we show that S. Tm overcomes the inhibitory effects of propionate by using it as a carbon source for anaerobic respiration. We determine that propionate metabolis

Molecular BiologyBiochemistry, Genetics and Molecular Biology
5
논문|인용수 52·2024
Salmonella Typhimurium expansion in the inflamed murine gut is dependent on aspartate derived from ROS-mediated microbiota lysis
Woongjae Yoo, Nicolas G. Shealy, Jacob K. Zieba, Teresa P. Torres, Madi Baltagulov, Julia Thomas, Catherine Shelton, Anna G. McGovern, Nora J. Foegeding, Erin E. Olsan, Mariana X. Byndloss
SJR Q1Cell Host & MicrobeOA

Inflammation boosts the availability of electron acceptors in the intestinal lumen, creating a favorable niche for pathogenic Enterobacteriaceae. However, the mechanisms linking intestinal inflammation-mediated changes in luminal metabolites and pathogen expansion remain unclear. Here, we show that mucosal inflammation induced by Salmonella enterica serovar Typhimurium (S. Tm) infection increases intestinal levels of the amino acid aspartate. S. Tm used aspartate-ammonia lyase (aspA)-dependent f

Molecular BiologyBiochemistry, Genetics and Molecular Biology
6
리뷰|인용수 49·2021
Colonization resistance: metabolic warfare as a strategy against pathogenic Enterobacteriaceae
Nicolas G. Shealy, Woongjae Yoo, Mariana X. Byndloss
SJR Q1Current Opinion in MicrobiologyOA
Molecular BiologyBiochemistry, Genetics and Molecular Biology
7
논문|인용수 29·2016
Fine-tuning of amino sugar homeostasis by EIIANtr in Salmonella Typhimurium
Woongjae Yoo, Hyunjin Yoon, Yeong‐Jae Seok, Chang‐Ro Lee, Hyung Ho Lee, Sangryeol Ryu
SJR Q1Scientific ReportsOA

The nitrogen-metabolic phosphotransferase system, PTS(Ntr), consists of the enzymes I(Ntr), NPr and IIA(Ntr) that are encoded by ptsP, ptsO, and ptsN, respectively. Due to the proximity of ptsO and ptsN to rpoN, the PTS(Ntr) system has been postulated to be closely related with nitrogen metabolism. To define the correlation between PTS(Ntr) and nitrogen metabolism, we performed ligand fishing with EIIA(Ntr) as a bait and revealed that D-glucosamine-6-phosphate synthase (GlmS) directly interacted

GeneticsBiochemistry, Genetics and Molecular Biology
8
논문|인용수 26·2017
Enzyme IIANtr Regulates Salmonella Invasion Via 1,2-Propanediol And Propionate Catabolism
Woongjae Yoo, Dajeong Kim, Hyunjin Yoon, Sangryeol Ryu
SJR Q1Scientific ReportsOA

Abstract Many Proteobacteria possess a nitrogen-metabolic phosphotransferase system (PTS Ntr ) consisting of EI Ntr , NPr, and EIIA Ntr (encoded by ptsP, ptsO , and ptsN , respectively). The PTS Ntr plays diverse regulatory roles, but the substrate phosphorylated by EIIA Ntr and its primary functions have not yet been identified. To comprehensively understand the roles of PTS Ntr in Salmonella Typhimurium, we compared the whole transcriptomes of wild-type and a Δ ptsN mutant. Genome-wide RNA seq

Food ScienceAgricultural and Biological Sciences
9
논문|인용수 18·2024
Metabolic Interaction Between Host and the Gut Microbiota During High-Fat Diet-Induced Colorectal Cancer
Chaeeun Lee, Seungrin Lee, Woongjae Yoo
SJR Q2The Journal of Microbiology

Colorectal cancer (CRC) is the second-highest cause of cancer-associated mortality among both men and women worldwide. One of the risk factors for CRC is obesity, which is correlated with a high-fat diet prevalent in Western dietary habits. The association between an obesogenic high-fat diet and CRC has been established for several decades; however, the mechanisms by which a high-fat diet increases the risk of CRC remain unclear. Recent studies indicate that gut microbiota strongly influence the

Molecular BiologyBiochemistry, Genetics and Molecular Biology
10
논문|인용수 10·2019
Programmed Delay of a Virulence Circuit Promotes Salmonella Pathogenicity
Jeongjoon Choi, Heeju Kim, Yoonjee Chang, Woongjae Yoo, Dajeong Kim, Sangryeol Ryu
SJR Q1mBioOA

To accomplish successful infection, pathogens must operate their virulence programs in a precise, time-sensitive, and coordinated manner. A major question is how pathogens control the timing of virulence gene expression during infection. Here we report that the intracellular pathogen Salmonella controls the timing and level of virulence gene expression by using an inhibitory protein, EIIA Ntr . A DNA binding master virulence regulator, PhoP, controls various virulence genes inside acidic phagoso

Food ScienceAgricultural and Biological Sciences
11
letter|인용수 9·2019
How to thrive in the inflamed gut
Woongjae Yoo, Mariana X. Byndloss
SJR Q1Nature Microbiology
Molecular BiologyBiochemistry, Genetics and Molecular Biology
12
논문|인용수 9·2017
The role of the FliD C-terminal domain in pentamer formation and interaction with FliT
Hee Jung Kim, Woongjae Yoo, Kyeong Sik Jin, Sangryeol Ryu, Hyung Ho Lee
SJR Q1Scientific ReportsOA

Flagellar biogenesis is controlled by a negative feedback loop. When FliD was secreted at the late step of flagellar assembly, the FliD-FliT complex disassembled and free FliT bound to the FlhDC complex, a master regulator of flagellar biogenesis, subsequently inhibiting the overall expression of flagellar proteins. In this study, we analyzed the role of the FliD C-terminal domain in pentamer formation and interaction with FliT. Our study showed that the FliD L443R mutant exists as a monomer in

Cell BiologyBiochemistry, Genetics and Molecular Biology
13
논문|인용수 8·2021
A Nitrogen Metabolic Enzyme Provides Salmonella Fitness Advantage by Promoting Utilization of Microbiota-Derived Carbon Source
Woongjae Yoo, Jeongjoon Choi, Bookyung Park, Mariana X. Byndloss, Sangryeol Ryu
SJR Q1ACS Infectious DiseasesOA

Microbes support their growth in vertebrate hosts by exploiting a large variety of dietary components as nutrients, which determines the composition of gut microbiota. A pathogen <i>Salmonella</i> expands by utilizing 1,2-propanediol, a microbiota-fermented product, during mucosal inflammation. However, it remains largely unknown how the pathogen decides which nutrient to consume from the complex mixture in the gut. Here, we show that <i>Salmonella enterica</i> serovar Typhimurium utilizes 1,2-p

Molecular BiologyBiochemistry, Genetics and Molecular Biology
14
preprint|인용수 3·2022
Microbiota-derived aspartate drives pathogenic Enterobacteriaceae expansion in the inflamed gut
Woongjae Yoo, Jacob K. Zieba, Nicolas G. Shealy, Teresa P. Torres, Julia Thomas, Catherine Shelton, Nora J. Foegeding, Erin E. Olsan, Mariana X. Byndloss
bioRxiv (Cold Spring Harbor Laboratory)OA

SUMMARY Inflammation boosts the availability of electron acceptors in the intestinal lumen creating a favorable niche for pathogenic Enterobacteriaceae. However, the mechanisms linking intestinal inflammation-mediated changes in luminal metabolites and pathogen expansion remain unclear. Here, we show that mucosal inflammation induced by Salmonella enterica serovar Typhimurium ( S. Tm) infection and chemical colitis results in increased intestinal levels of the amino acid aspartate. The S. Tm and

Molecular BiologyBiochemistry, Genetics and Molecular Biology
15
preprint|인용수 2·2021
Salmonella Typhimurium uses anaerobic respiration to overcome propionate-mediated colonization resistance
Catherine Shelton, Woongjae Yoo, Nicolas G. Shealy, Teresa P. Torres, Jacob K. Zieba, M. Wade Calcutt, Nora J. Foegeding, Dajeong Kim, Jinshil Kim, Sangryeol Ryu, Mariana X. Byndloss
bioRxiv (Cold Spring Harbor Laboratory)OA

SUMMARY The gut microbiota benefits the host by limiting enteric pathogen expansion (colonization resistance) partially via the production of inhibitory metabolites. Propionate, a short-chain fatty acid produced by microbiota members, is proposed to mediate colonization resistance against Salmonella enterica serovar Typhimurium ( S. Tm). Here, we show that S. Tm overcomes the inhibitory effects of propionate by using it as a carbon source for anaerobic respiration. We determined that propionate

Molecular BiologyBiochemistry, Genetics and Molecular Biology

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Molecular BiologyFood ScienceGeneticsCell Biology

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